Cow genome map

Conread name: Ss1.1-Lng1-LNG010027H09.5

Conread position: 1071-1296
Cow position: chr9:39001242-39001461 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 96

Conread position: 1081-1289
Cow position: chr9:15855552-15855352 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 5

Conread position: 1081-1289
Cow position: chr9:22376745-22376951 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 1081-1289
Cow position: chr9:38697974-38698175 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 53, 64

Conread position: 1082-1212
Cow position: chr9:56795236-56795112 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 1082-1225
Cow position: chr9:40923169-40923025 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 107

Conread position: 1082-1229
Cow position: chr9:42366310-42366455 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 1082-1237
Cow position: chr9:59113928-59114089 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 1082-1250
Cow position: chr9:64606252-64606084 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 122

Conread position: 1082-1266
Cow position: chr9:36587236-36587043 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1082-1276
Cow position: chr9:19835905-19835715 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 159
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 69

Conread position: 1082-1280
Cow position: chr9:4915592-4915386 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 68

Conread position: 1082-1280
Cow position: chr9:58125663-58125860 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 54, 33

Conread position: 1082-1281
Cow position: chr9:4834471-4834661 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 53, 70

Conread position: 1082-1282
Cow position: chr9:6557307-6557501 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 55, 82

Conread position: 1082-1282
Cow position: chr9:8234096-8234282 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 55, 85

Conread position: 1082-1282
Cow position: chr9:34763373-34763172 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 114

Conread position: 1082-1282
Cow position: chr9:41318503-41318302 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 57, 113

Conread position: 1082-1288
Cow position: chr9:12564877-12565069 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 93

Conread position: 1082-1289
Cow position: chr9:1527316-1527111 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 57, 112

Conread position: 1082-1289
Cow position: chr9:9077611-9077419 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 1082-1291
Cow position: chr9:4985883-4985676 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 54, 83

Conread position: 1082-1291
Cow position: chr9:13071847-13072053 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 55, 0

Conread position: 1082-1291
Cow position: chr9:45140374-45140584 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 167
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 55, 32

Conread position: 1082-1296
Cow position: chr9:7670108-7670312 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 112

Conread position: 1083-1289
Cow position: chr9:34188469-34188667 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 80

Conread position: 1085-1271
Cow position: chr9:15282657-15282844 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 112

Conread position: 1086-1279
Cow position: chr9:18570898-18570709 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 50, 92

Conread position: 1087-1296
Cow position: chr9:36508608-36508390 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 206

Conread position: 1088-1252
Cow position: chr9:39994272-39994110 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 114

Conread position: 1088-1254
Cow position: chr9:19082108-19081946 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 1088-1289
Cow position: chr9:25812804-25812618 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 1088-1292
Cow position: chr9:12183212-12183416 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 114

Conread position: 1088-1296
Cow position: chr9:12199420-12199212 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 49, 108

Conread position: 1089-1226
Cow position: chr9:14373604-14373742 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 9, 108

Conread position: 1091-1292
Cow position: chr9:26585213-26585399 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 62

Conread position: 1094-1266
Cow position: chr9:2638825-2638655 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 97

Conread position: 1114-1277
Cow position: chr9:53597299-53597129 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 1115-1289
Cow position: chr9:50108601-50108763 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 37

Show alignments to all cow chromosomes.