Cow genome map
Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
Conread position: | 1081-1257 |
Cow position: | chrX:35552916-35552746 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 141 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 58, 5 |
Conread position: | 1081-1279 |
Cow position: | chrX:37749228-37749027 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 152 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 55, 5 |
Conread position: | 1082-1226 |
Cow position: | chrX:30785128-30784983 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 112 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 54, 139 |
Conread position: | 1082-1255 |
Cow position: | chrX:12227543-12227374 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 126 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 118, 0 |
Conread position: | 1082-1258 |
Cow position: | chrX:18518607-18518437 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 143 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 56, 106 |
Conread position: | 1082-1271 |
Cow position: | chrX:37957134-37956946 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 145 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 29, 116 |
Conread position: | 1082-1277 |
Cow position: | chrX:37980952-37980767 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 156 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 54, 25 |
Conread position: | 1082-1281 |
Cow position: | chrX:1330227-1330421 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 160 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 53, 114 |
Conread position: | 1082-1281 |
Cow position: | chrX:4019350-4019555 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 152 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 49, 148 |
Conread position: | 1082-1281 |
Cow position: | chrX:4590520-4590327 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 157 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 29, 106 |
Conread position: | 1082-1282 |
Cow position: | chrX:6472281-6472083 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 47 |
Conread position: | 1082-1282 |
Cow position: | chrX:6672350-6672151 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 162 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 55, 71 |
Conread position: | 1082-1282 |
Cow position: | chrX:37236573-37236380 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 163 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 54, 72 |
Conread position: | 1082-1282 |
Cow position: | chrX:40698792-40698616 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 152 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 1082-1289 |
Cow position: | chrX:2186833-2186622 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 165 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 33, 119 |
Conread position: | 1082-1289 |
Cow position: | chrX:4625484-4625274 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 169 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 29 |
Conread position: | 1082-1289 |
Cow position: | chrX:20958150-20957935 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 159 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 55, 19 |
Conread position: | 1082-1289 |
Cow position: | chrX:21816837-21816636 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 161 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 37, 32 |
Conread position: | 1082-1289 |
Cow position: | chrX:25453743-25453549 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 159 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 54, 87 |
Conread position: | 1082-1289 |
Cow position: | chrX:32546473-32546262 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 151 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 54, 133 |
Conread position: | 1082-1289 |
Cow position: | chrX:37137697-37137908 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 150 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 50, 143 |
Conread position: | 1082-1289 |
Cow position: | chrX:40353883-40353675 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 115 |
Conread position: | 1082-1295 |
Cow position: | chrX:957060-956840 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 172 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 46, 157 |
Conread position: | 1082-1295 |
Cow position: | chrX:2147880-2147679 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 172 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 56, 29 |
Conread position: | 1082-1295 |
Cow position: | chrX:4440424-4440209 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1082-1295 |
Cow position: | chrX:19017663-19017882 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1082-1295 |
Cow position: | chrX:20505277-20505069 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 110 |
Conread position: | 1082-1296 |
Cow position: | chrX:38891958-38892183 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 158 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 55, 152 |
Conread position: | 1083-1273 |
Cow position: | chrX:23253646-23253828 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 148 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 54, 101 |
Conread position: | 1083-1295 |
Cow position: | chrX:11675642-11675432 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 172 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 50, 81 |
Conread position: | 1084-1255 |
Cow position: | chrX:4947929-4948097 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 142 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 1085-1289 |
Cow position: | chrX:21885533-21885742 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 164 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 1086-1282 |
Cow position: | chrX:4630809-4631000 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 161 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 51, 24 |
Conread position: | 1088-1257 |
Cow position: | chrX:44248674-44248835 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 131 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 44, 79 |
Conread position: | 1088-1281 |
Cow position: | chrX:5956769-5956959 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 151 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 21, 92 |
Conread position: | 1088-1282 |
Cow position: | chrX:9910193-9910378 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 159 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 48, 76 |
Conread position: | 1088-1289 |
Cow position: | chrX:18699794-18699991 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 151 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 48, 88 |
Conread position: | 1088-1289 |
Cow position: | chrX:25921238-25921418 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 157 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 1088-1289 |
Cow position: | chrX:27458167-27458365 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 162 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 51, 96 |
Conread position: | 1090-1295 |
Cow position: | chrX:18814735-18814529 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 161 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 28, 91 |
Conread position: | 1091-1289 |
Cow position: | chrX:19127073-19127268 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 158 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 46, 24 |
Conread position: | 1094-1233 |
Cow position: | chrX:1427834-1427692 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 118 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1097-1289 |
Cow position: | chrX:13403190-13403378 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 151 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 1102-1281 |
Cow position: | chrX:18468014-18467840 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 135 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 35, 76 |
Conread position: | 1103-1271 |
Cow position: | chrX:11983143-11982978 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 137 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 33, 84 |
Conread position: | 1105-1247 |
Cow position: | chrX:16817196-16817058 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 115 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 33, 73 |
Conread position: | 1107-1279 |
Cow position: | chrX:43647207-43647378 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 137 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 29, 89 |
Conread position: | 1113-1271 |
Cow position: | chrX:40350446-40350293 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 128 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 25, 84 |
Conread position: | 1134-1289 |
Cow position: | chrX:4597194-4597350 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 133 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 1134-1296 |
Cow position: | chrX:4601126-4601282 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 126 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 1136-1282 |
Cow position: | chrX:24951855-24951995 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 120 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 1137-1282 |
Cow position: | chrX:41660671-41660520 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 120 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 69, 24 |
Conread position: | 1138-1282 |
Cow position: | chrX:25106738-25106597 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 126 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 1175-1282 |
Cow position: | chrX:24286411-24286307 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 91 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 23, 0 |
Show alignments to all cow chromosomes.