Cow genome map

Conread name: Ss1.1-Lng1-LNG010036F09.5.5

Conread position: 100-400
Cow position: chr23:23177867-23177569 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 79, 13

Conread position: 113-385
Cow position: chr23:23096967-23096696 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 118-385
Cow position: chr23:20551142-20551409 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 118-385
Cow position: chr23:21180741-21180474 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 118-385
Cow position: chr23:23022929-23022662 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 203

Conread position: 118-385
Cow position: chr23:23049471-23049204 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 200

Conread position: 376-660
Cow position: chr23:21180287-21180003 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 376-660
Cow position: chr23:23022459-23022176 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 114

Conread position: 376-660
Cow position: chr23:23049041-23048757 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 209

Conread position: 376-660
Cow position: chr23:23096509-23096228 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 30

Conread position: 377-660
Cow position: chr23:20551600-20551882 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 377-660
Cow position: chr23:23177323-23177038 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 157

Conread position: 443-660
Cow position: chr23:24589535-24589754 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 43, 67

Conread position: 658-828
Cow position: chr23:23176142-23175972 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 145
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 658-935
Cow position: chr23:23048188-23047911 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 658-936
Cow position: chr23:20553184-20553462 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 658-936
Cow position: chr23:21000454-21000732 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 658-936
Cow position: chr23:21179119-21178841 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 658-936
Cow position: chr23:23021253-23020975 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 658-936
Cow position: chr23:23093772-23093494 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 659-936
Cow position: chr23:24591581-24591855 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 936-1061
Cow position: chr23:20553571-20553700 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 936-1061
Cow position: chr23:23020859-23020734 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 115, 47

Conread position: 936-1062
Cow position: chr23:23175802-23175682 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 115, 61

Conread position: 936-1063
Cow position: chr23:21178724-21178599 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 115, 55

Conread position: 936-1063
Cow position: chr23:23047794-23047665 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 112
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 102, 0

Conread position: 936-1063
Cow position: chr23:23093378-23093250 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 109
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 115, 0

Conread position: 936-1066
Cow position: chr23:24591966-24592091 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 115, 62

Conread position: 1130-1280
Cow position: chr23:23046867-23046727 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1130-1329
Cow position: chr23:20554526-20554727 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 46, 71

Conread position: 1130-1352
Cow position: chr23:21177812-21177585 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 129, 38

Conread position: 1130-1352
Cow position: chr23:23092455-23092244 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1130-1548
Cow position: chr23:24592887-24593296 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 35

Conread position: 1444-1548
Cow position: chr23:21177486-21177382 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 66, 36

Show alignments to all cow chromosomes.