Cow genome map

Conread name: Ss1.1-Lng1-LNG010041H06.5

Conread position: 1-166
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 15, 27

Conread position: 1-182
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 50

Conread position: 1-186
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 15, 72

Conread position: 1-194
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 140

Conread position: 1-202
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 1-202
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 196

Conread position: 1-240
Cow position:
Alignm length: 256
Alignm identity: 190
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 25, 161

Conread position: 1-241
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 15, 46

Conread position: 1-293
Cow position:
Alignm length: 307
Alignm identity: 212
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 253

Conread position: 2-170
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 2-182
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 71

Conread position: 2-182
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 14, 33

Conread position: 2-192
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 136

Conread position: 2-202
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 56

Conread position: 2-203
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 63, 28

Conread position: 2-206
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 120

Conread position: 2-218
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 14, 216

Conread position: 2-218
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 161

Conread position: 2-240
Cow position:
Alignm length: 247
Alignm identity: 174
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 14, 116

Conread position: 2-240
Cow position:
Alignm length: 250
Alignm identity: 180
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 14, 138

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 30

Conread position: 2-242
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 2-294
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 50

Conread position: 2-296
Cow position:
Alignm length: 302
Alignm identity: 217
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 14, 33

Conread position: 2-296
Cow position:
Alignm length: 315
Alignm identity: 215
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 20, 138

Conread position: 2-296
Cow position:
Alignm length: 303
Alignm identity: 223
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 14, 134

Conread position: 2-296
Cow position:
Alignm length: 300
Alignm identity: 208
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 8, 71

Conread position: 5-142
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 5-147
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 5-203
Cow position:
Alignm length: 201
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 42

Conread position: 5-218
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 5, 29

Conread position: 5-236
Cow position:
Alignm length: 245
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 29

Conread position: 5-240
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 11, 133

Conread position: 5-240
Cow position:
Alignm length: 255
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 5-292
Cow position:
Alignm length: 289
Alignm identity: 195
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 60

Conread position: 5-296
Cow position:
Alignm length: 306
Alignm identity: 215
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 11, 131

Conread position: 6-182
Cow position:
Alignm length: 177
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 6-194
Cow position:
Alignm length: 195
Alignm identity: 135
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 156

Conread position: 6-194
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 6-195
Cow position:
Alignm length: 192
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 65

Conread position: 6-202
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 22

Conread position: 6-202
Cow position:
Alignm length: 205
Alignm identity: 142
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 6-218
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 10, 184

Conread position: 6-223
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 70

Conread position: 6-240
Cow position:
Alignm length: 246
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 20

Conread position: 6-296
Cow position:
Alignm length: 293
Alignm identity: 192
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 10, 59

Conread position: 6-296
Cow position:
Alignm length: 294
Alignm identity: 194
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 59

Conread position: 6-296
Cow position:
Alignm length: 293
Alignm identity: 191
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 66

Conread position: 6-296
Cow position:
Alignm length: 294
Alignm identity: 196
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 53

Conread position: 7-236
Cow position:
Alignm length: 237
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 39

Conread position: 9-161
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 9-170
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 25

Conread position: 9-202
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 153

Conread position: 9-203
Cow position:
Alignm length: 202
Alignm identity: 158
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 7, 0

Conread position: 9-232
Cow position:
Alignm length: 229
Alignm identity: 157
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 52, 105

Conread position: 10-296
Cow position:
Alignm length: 314
Alignm identity: 229
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 6, 0

Conread position: 11-240
Cow position:
Alignm length: 234
Alignm identity: 159
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 46, 15

Conread position: 12-182
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 12-194
Cow position:
Alignm length: 184
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 14-161
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 42, 130

Conread position: 14-170
Cow position:
Alignm length: 162
Alignm identity: 130
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 54, 125

Conread position: 14-170
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 14-182
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 14-187
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 55, 118

Conread position: 14-194
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 12

Conread position: 14-194
Cow position:
Alignm length: 185
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 102

Conread position: 14-196
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 62, 25

Conread position: 14-198
Cow position:
Alignm length: 185
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 14-200
Cow position:
Alignm length: 189
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 14-201
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 51

Conread position: 14-202
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 14-202
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 14-202
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 42, 72

Conread position: 14-202
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 54, 144

Conread position: 14-203
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 122

Conread position: 14-204
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 49, 9

Conread position: 14-205
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 14-208
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 110

Conread position: 14-218
Cow position:
Alignm length: 210
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 14-223
Cow position:
Alignm length: 217
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 14-236
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 14-236
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 180, 45

Conread position: 14-240
Cow position:
Alignm length: 227
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 14-240
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 184

Conread position: 14-240
Cow position:
Alignm length: 239
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 14-296
Cow position:
Alignm length: 290
Alignm identity: 195
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 145

Conread position: 14-296
Cow position:
Alignm length: 286
Alignm identity: 204
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 45, 18

Conread position: 14-296
Cow position:
Alignm length: 287
Alignm identity: 196
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 18

Conread position: 15-194
Cow position:
Alignm length: 181
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 55, 124

Conread position: 15-205
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 173, 30

Conread position: 15-293
Cow position:
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 31

Conread position: 16-296
Cow position:
Alignm length: 300
Alignm identity: 213
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 18-194
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 18-240
Cow position:
Alignm length: 230
Alignm identity: 155
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 182, 65

Conread position: 24-182
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 24-236
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 113

Conread position: 24-240
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 173

Conread position: 25-240
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 108

Conread position: 26-226
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 12, 175

Conread position: 28-182
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 28-214
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 14

Conread position: 29-296
Cow position:
Alignm length: 281
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 35-250
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 169, 24

Conread position: 36-240
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 44-240
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 91

Conread position: 45-236
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 49-235
Cow position:
Alignm length: 190
Alignm identity: 131
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 55-240
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 99, 7

Conread position: 56-255
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 68, 13

Conread position: 57-203
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 57-241
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 147, 59

Conread position: 61-296
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 143, 8

Conread position: 64-240
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 110, 0

Conread position: 71-218
Cow position:
Alignm length: 149
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 133, 113

Conread position: 71-240
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 133, 0

Show alignments to all cow chromosomes.