Cow genome map

Conread name: Ss1.1-Lng1-LNG010041H06.5

Conread position: 1-132
Cow position: chr13:32826373-32826510 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-170
Cow position: chr13:19188383-19188211 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-170
Cow position: chr13:23960730-23960892 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 63

Conread position: 1-183
Cow position: chr13:37818667-37818854 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 151

Conread position: 1-194
Cow position: chr13:34263286-34263484 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 53

Conread position: 1-194
Cow position: chr13:49503448-49503646 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 1-201
Cow position: chr13:19320618-19320411 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 1-202
Cow position: chr13:18835275-18835082 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 60

Conread position: 1-203
Cow position: chr13:971810-972020 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 15, 142

Conread position: 1-206
Cow position: chr13:17622364-17622162 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 42

Conread position: 1-212
Cow position: chr13:21235603-21235803 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 60

Conread position: 1-237
Cow position: chr13:18852163-18851923 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 140

Conread position: 1-240
Cow position: chr13:41806858-41806604 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 1-277
Cow position: chr13:20706123-20706407 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 15, 0

Conread position: 1-296
Cow position: chr13:2774210-2773918 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 58

Conread position: 2-109
Cow position: chr13:55295541-55295652 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 90

Conread position: 2-131
Cow position: chr13:20880844-20880981 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 2-161
Cow position: chr13:21176240-21176403 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 2-170
Cow position: chr13:53566677-53566511 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 91

Conread position: 2-182
Cow position: chr13:15884938-15885124 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 2-182
Cow position: chr13:19610483-19610666 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 137

Conread position: 2-185
Cow position: chr13:8524533-8524723 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 2-194
Cow position: chr13:15166901-15166704 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 117

Conread position: 2-195
Cow position: chr13:15528950-15529152 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 2-196
Cow position: chr13:7076339-7076141 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 118

Conread position: 2-202
Cow position: chr13:11397377-11397570 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 38

Conread position: 2-202
Cow position: chr13:13501540-13501739 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 77

Conread position: 2-202
Cow position: chr13:15257295-15257489 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 56, 28

Conread position: 2-202
Cow position: chr13:24369662-24369460 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 157

Conread position: 2-202
Cow position: chr13:54582958-54582752 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 154

Conread position: 2-203
Cow position: chr13:13196323-13196116 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 2-203
Cow position: chr13:20871471-20871267 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 169

Conread position: 2-203
Cow position: chr13:48165343-48165549 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 96

Conread position: 2-205
Cow position: chr13:21288004-21288210 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 14, 73

Conread position: 2-205
Cow position: chr13:47022441-47022240 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 30

Conread position: 2-210
Cow position: chr13:15194650-15194865 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 14, 0

Conread position: 2-221
Cow position: chr13:57494106-57494330 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 16, 45

Conread position: 2-237
Cow position: chr13:17821186-17821423 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 188

Conread position: 2-237
Cow position: chr13:61976883-61977123 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 14, 68

Conread position: 2-240
Cow position: chr13:5671509-5671754 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 14, 27

Conread position: 2-240
Cow position: chr13:17021647-17021893 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 16, 99

Conread position: 2-240
Cow position: chr13:18058164-18058415 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 2-240
Cow position: chr13:26698416-26698665 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 16, 134

Conread position: 2-240
Cow position: chr13:43480139-43479893 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 14, 136

Conread position: 2-240
Cow position: chr13:52477564-52477813 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 117

Conread position: 2-241
Cow position: chr13:11808640-11808410 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 201, 12

Conread position: 2-261
Cow position: chr13:17569018-17569286 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 14, 120

Conread position: 2-277
Cow position: chr13:18172420-18172135 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 2-283
Cow position: chr13:21135818-21136095 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 227

Conread position: 2-292
Cow position: chr13:20684039-20684344 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 2-296
Cow position: chr13:18696925-18696626 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 182

Conread position: 2-296
Cow position: chr13:40943326-40943024 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 14, 172

Conread position: 3-202
Cow position: chr13:10928911-10929110 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 124

Conread position: 4-226
Cow position: chr13:9981761-9981989 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 118

Conread position: 5-168
Cow position: chr13:17966130-17966297 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 5-168
Cow position: chr13:54702266-54702098 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 10, 0

Conread position: 5-194
Cow position: chr13:37484195-37484393 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 29

Conread position: 5-202
Cow position: chr13:19279175-19278973 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 11, 117

Conread position: 5-204
Cow position: chr13:13261083-13260879 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 137

Conread position: 5-234
Cow position: chr13:8374693-8374923 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 11, 144

Conread position: 5-237
Cow position: chr13:7149307-7149067 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 29

Conread position: 5-237
Cow position: chr13:47007651-47007878 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 22

Conread position: 5-240
Cow position: chr13:19882957-19883202 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 24

Conread position: 5-240
Cow position: chr13:20473603-20473843 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 5-240
Cow position: chr13:53574049-53573805 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 10, 133

Conread position: 5-288
Cow position: chr13:56155076-56155359 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 187
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 52, 132

Conread position: 6-170
Cow position: chr13:25579111-25579280 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 6-194
Cow position: chr13:24230287-24230100 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 58

Conread position: 6-203
Cow position: chr13:3315600-3315798 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 68

Conread position: 6-208
Cow position: chr13:17114300-17114505 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 59, 187

Conread position: 6-210
Cow position: chr13:10845673-10845474 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 9, 121

Conread position: 6-233
Cow position: chr13:5758263-5758498 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 6-236
Cow position: chr13:38329704-38329454 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 6-293
Cow position: chr13:1042888-1043189 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 6-293
Cow position: chr13:45023134-45023417 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 6-296
Cow position: chr13:8609473-8609767 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 194
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 58, 73

Conread position: 9-170
Cow position: chr13:9593581-9593415 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 9-180
Cow position: chr13:62518256-62518430 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 49, 36

Conread position: 9-201
Cow position: chr13:12207116-12206927 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 9-203
Cow position: chr13:20666312-20666509 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 131

Conread position: 9-218
Cow position: chr13:50568342-50568546 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 7, 52

Conread position: 10-161
Cow position: chr13:56686507-56686353 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 130

Conread position: 10-194
Cow position: chr13:21275929-21275745 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 126
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 10-202
Cow position: chr13:11381650-11381845 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 22

Conread position: 10-202
Cow position: chr13:46329532-46329728 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 55, 0

Conread position: 10-219
Cow position: chr13:24586115-24585907 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 90

Conread position: 10-240
Cow position: chr13:21170604-21170360 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 6, 129

Conread position: 11-159
Cow position: chr13:15757191-15757041 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 11-170
Cow position: chr13:29123376-29123214 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 71, 48

Conread position: 12-153
Cow position: chr13:12619044-12619188 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 12-165
Cow position: chr13:20820766-20820914 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 12-200
Cow position: chr13:54388949-54389141 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 51, 0

Conread position: 12-202
Cow position: chr13:8402126-8401934 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 57, 128

Conread position: 12-202
Cow position: chr13:20217325-20217520 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 12-240
Cow position: chr13:58763558-58763777 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 13-196
Cow position: chr13:31813946-31813760 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 71

Conread position: 13-240
Cow position: chr13:21242015-21242244 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 14-125
Cow position: chr13:52922160-52922050 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 14-139
Cow position: chr13:30693779-30693655 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 14-142
Cow position: chr13:10098923-10099050 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 69, 33

Conread position: 14-165
Cow position: chr13:46181859-46181707 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 14-170
Cow position: chr13:12045267-12045428 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 14-170
Cow position: chr13:50750986-50751146 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 14-181
Cow position: chr13:48862028-48862196 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 124

Conread position: 14-182
Cow position: chr13:7265051-7265222 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 104

Conread position: 14-182
Cow position: chr13:13176719-13176548 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 14-194
Cow position: chr13:827310-827131 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 101

Conread position: 14-194
Cow position: chr13:11460693-11460519 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 29

Conread position: 14-194
Cow position: chr13:15903090-15902910 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 47, 18

Conread position: 14-194
Cow position: chr13:15991163-15991344 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 41, 85

Conread position: 14-194
Cow position: chr13:20839631-20839452 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 14-194
Cow position: chr13:20868688-20868865 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 53, 25

Conread position: 14-194
Cow position: chr13:30258916-30258733 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 17

Conread position: 14-198
Cow position: chr13:6974228-6974044 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 176

Conread position: 14-202
Cow position: chr13:17439702-17439890 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 118

Conread position: 14-202
Cow position: chr13:34281744-34281557 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 123

Conread position: 14-202
Cow position: chr13:35659821-35659638 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 14-202
Cow position: chr13:42200687-42200497 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 14-202
Cow position: chr13:48037689-48037501 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 123

Conread position: 14-208
Cow position: chr13:49022800-49022995 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 18

Conread position: 14-210
Cow position: chr13:890104-890301 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 18

Conread position: 14-216
Cow position: chr13:55674141-55674346 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 14-218
Cow position: chr13:12670378-12670589 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 14

Conread position: 14-218
Cow position: chr13:27525197-27525398 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 103, 48

Conread position: 14-219
Cow position: chr13:16014877-16014670 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 18

Conread position: 14-237
Cow position: chr13:24715311-24715084 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 14-238
Cow position: chr13:23479095-23478862 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 53, 19

Conread position: 14-240
Cow position: chr13:152028-151797 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 194, 51

Conread position: 14-240
Cow position: chr13:13089095-13088864 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 95

Conread position: 14-240
Cow position: chr13:13320862-13320629 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 170, 54

Conread position: 14-240
Cow position: chr13:17745313-17745090 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 138

Conread position: 14-240
Cow position: chr13:20288398-20288170 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 190, 51

Conread position: 14-240
Cow position: chr13:20784662-20784426 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 14-240
Cow position: chr13:22085676-22085902 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 186

Conread position: 14-240
Cow position: chr13:25817596-25817361 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 130

Conread position: 14-240
Cow position: chr13:35526136-35526367 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 135, 57

Conread position: 14-240
Cow position: chr13:36877119-36876897 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 183, 45

Conread position: 14-240
Cow position: chr13:45073183-45073417 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 126

Conread position: 14-241
Cow position: chr13:34261298-34261066 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 97, 43

Conread position: 14-243
Cow position: chr13:17292065-17292299 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 48, 112

Conread position: 14-293
Cow position: chr13:20679407-20679119 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 54, 45

Conread position: 14-296
Cow position: chr13:17800141-17799857 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 30

Conread position: 14-296
Cow position: chr13:52880815-52881081 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 171, 50

Conread position: 14-296
Cow position: chr13:55316121-55316420 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 54, 234

Conread position: 14-297
Cow position: chr13:17563804-17563522 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 184
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 174, 57

Conread position: 15-182
Cow position: chr13:34555759-34555930 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 95

Conread position: 15-237
Cow position: chr13:15288856-15289084 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 43, 119

Conread position: 16-203
Cow position: chr13:23856278-23856088 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 92

Conread position: 16-237
Cow position: chr13:23667320-23667088 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 77

Conread position: 16-286
Cow position: chr13:17970962-17971229 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 22

Conread position: 18-218
Cow position: chr13:20314555-20314761 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 27, 0

Conread position: 21-218
Cow position: chr13:18197546-18197746 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 82

Conread position: 22-293
Cow position: chr13:11103131-11103401 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 210

Conread position: 23-202
Cow position: chr13:35557046-35557233 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 23-205
Cow position: chr13:18181714-18181900 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 24-202
Cow position: chr13:15233980-15233804 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 24-296
Cow position: chr13:52057618-52057343 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 39, 216

Conread position: 25-219
Cow position: chr13:37640640-37640449 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 175, 44

Conread position: 25-296
Cow position: chr13:8355262-8354981 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 34, 112

Conread position: 27-202
Cow position: chr13:19007987-19007813 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 104

Conread position: 27-205
Cow position: chr13:15144310-15144488 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 159

Conread position: 27-369
Cow position: chr13:41549732-41550063 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 224
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 109

Conread position: 29-237
Cow position: chr13:17089470-17089679 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 175, 30

Conread position: 33-202
Cow position: chr13:21171523-21171694 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 33-240
Cow position: chr13:17611501-17611719 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 33-297
Cow position: chr13:8478452-8478184 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 64

Conread position: 38-237
Cow position: chr13:29663074-29662873 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 56

Conread position: 39-202
Cow position: chr13:28440492-28440657 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 100

Conread position: 39-240
Cow position: chr13:55494477-55494690 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 54-297
Cow position: chr13:3209295-3209536 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 118, 30

Conread position: 56-240
Cow position: chr13:57985916-57986100 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 150, 6

Conread position: 58-296
Cow position: chr13:37621338-37621572 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 146, 76

Conread position: 59-240
Cow position: chr13:56535476-56535299 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 34, 58

Conread position: 79-237
Cow position: chr13:8450331-8450168 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 125, 0

Conread position: 80-367
Cow position: chr13:8350323-8350045 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 123, 211

Conread position: 94-240
Cow position: chr13:33854698-33854852 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 111, 0

Show alignments to all cow chromosomes.