Cow genome map

Conread name: Ss1.1-Lng1-LNG010041H06.5

Conread position: 1-194
Cow position: chr14:29632746-29632938 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 27

Conread position: 1-194
Cow position: chr14:33309367-33309560 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 59

Conread position: 1-202
Cow position: chr14:1646052-1646249 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 60

Conread position: 1-202
Cow position: chr14:15492736-15492528 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 1-203
Cow position: chr14:14317022-14316821 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 132

Conread position: 1-203
Cow position: chr14:32371604-32371806 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 60

Conread position: 1-205
Cow position: chr14:19372481-19372271 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 15, 0

Conread position: 1-205
Cow position: chr14:48427213-48427006 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 15, 139

Conread position: 1-225
Cow position: chr14:39774911-39775139 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 62, 138

Conread position: 1-240
Cow position: chr14:13846127-13845877 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 61

Conread position: 1-240
Cow position: chr14:22989174-22988923 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 112

Conread position: 2-175
Cow position: chr14:24796288-24796471 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 2-183
Cow position: chr14:5633799-5633991 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 2-191
Cow position: chr14:40433059-40432872 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 14, 56

Conread position: 2-194
Cow position: chr14:8784321-8784144 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 26

Conread position: 2-202
Cow position: chr14:20640488-20640694 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 165
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 14, 126

Conread position: 2-202
Cow position: chr14:26442201-26442405 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 14, 139

Conread position: 2-203
Cow position: chr14:18345595-18345794 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 14, 31

Conread position: 2-212
Cow position: chr14:15997625-15997840 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 2-212
Cow position: chr14:48838734-48838520 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 2-224
Cow position: chr14:41210992-41210766 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 79, 144

Conread position: 2-230
Cow position: chr14:48773043-48772810 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 14, 179

Conread position: 2-233
Cow position: chr14:39918623-39918844 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 198, 28

Conread position: 2-235
Cow position: chr14:23080625-23080860 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 192

Conread position: 2-237
Cow position: chr14:20110584-20110830 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 40

Conread position: 2-237
Cow position: chr14:36254568-36254798 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 66

Conread position: 2-242
Cow position: chr14:24608105-24607852 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 128

Conread position: 2-292
Cow position: chr14:19360033-19359733 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 14, 31

Conread position: 2-296
Cow position: chr14:8750214-8749907 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 14, 136

Conread position: 5-118
Cow position: chr14:11819987-11820101 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 59

Conread position: 5-194
Cow position: chr14:24417020-24416820 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 11, 35

Conread position: 5-201
Cow position: chr14:39770097-39770291 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 134

Conread position: 5-218
Cow position: chr14:38338011-38338214 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 5-269
Cow position: chr14:29698222-29698487 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 11, 29

Conread position: 6-170
Cow position: chr14:14949078-14949246 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 6-194
Cow position: chr14:19863298-19863491 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 6-198
Cow position: chr14:27591819-27592017 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 10, 152

Conread position: 6-218
Cow position: chr14:28115051-28115269 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 55

Conread position: 6-235
Cow position: chr14:33791319-33791086 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 199, 128

Conread position: 6-292
Cow position: chr14:10078404-10078118 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 220

Conread position: 6-293
Cow position: chr14:34199714-34199997 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 59

Conread position: 6-296
Cow position: chr14:18763310-18763605 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 195
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 58

Conread position: 6-296
Cow position: chr14:22941587-22941881 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 223

Conread position: 9-202
Cow position: chr14:16256896-16256694 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 50, 23

Conread position: 9-205
Cow position: chr14:35018625-35018821 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 24

Conread position: 10-237
Cow position: chr14:33247303-33247529 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 10-288
Cow position: chr14:16524604-16524336 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 11

Conread position: 11-293
Cow position: chr14:26433112-26433387 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 63, 191

Conread position: 12-201
Cow position: chr14:47170225-47170417 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 102

Conread position: 13-194
Cow position: chr14:4282382-4282563 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 127

Conread position: 14-182
Cow position: chr14:9308355-9308185 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 27

Conread position: 14-194
Cow position: chr14:12634762-12634938 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 14-194
Cow position: chr14:19618626-19618807 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 31

Conread position: 14-194
Cow position: chr14:33830421-33830245 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 14-202
Cow position: chr14:34983988-34983802 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 136, 35

Conread position: 14-202
Cow position: chr14:40165548-40165360 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 164

Conread position: 14-203
Cow position: chr14:37447345-37447529 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 27

Conread position: 14-206
Cow position: chr14:33773925-33774116 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 113

Conread position: 14-207
Cow position: chr14:39778880-39778682 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 14-210
Cow position: chr14:2038690-2038881 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 14-223
Cow position: chr14:1977946-1978159 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 143
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 14-230
Cow position: chr14:4877107-4877321 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 59

Conread position: 14-232
Cow position: chr14:49021778-49021992 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 14-235
Cow position: chr14:11043365-11043601 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 14-237
Cow position: chr14:16549879-16550107 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 58, 158

Conread position: 14-238
Cow position: chr14:23682392-23682157 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 14-240
Cow position: chr14:8848379-8848166 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 14-240
Cow position: chr14:19189167-19188938 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 31

Conread position: 14-240
Cow position: chr14:33714552-33714786 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 72

Conread position: 14-240
Cow position: chr14:42154839-42155079 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 140

Conread position: 14-241
Cow position: chr14:13042881-13042646 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 67

Conread position: 14-259
Cow position: chr14:37131780-37131524 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 14-275
Cow position: chr14:24981579-24981325 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 118

Conread position: 15-207
Cow position: chr14:46654420-46654611 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 88

Conread position: 16-278
Cow position: chr14:16760525-16760252 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 78

Conread position: 18-237
Cow position: chr14:8786431-8786646 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 163, 119

Conread position: 18-240
Cow position: chr14:10693138-10693369 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 122, 166

Conread position: 18-283
Cow position: chr14:24945370-24945624 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 49, 14

Conread position: 19-237
Cow position: chr14:12954263-12954484 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 150
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 12

Conread position: 19-295
Cow position: chr14:33300822-33300554 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 52, 109

Conread position: 22-288
Cow position: chr14:41486143-41486401 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 115

Conread position: 23-220
Cow position: chr14:3162842-3162650 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 10

Conread position: 24-292
Cow position: chr14:33751651-33751375 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 44, 122

Conread position: 26-251
Cow position: chr14:5557006-5557238 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 216

Conread position: 28-182
Cow position: chr14:42480108-42480262 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 56

Conread position: 29-240
Cow position: chr14:41749651-41749868 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 21

Conread position: 30-193
Cow position: chr14:3779447-3779278 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 6

Conread position: 30-216
Cow position: chr14:25903634-25903452 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 30-219
Cow position: chr14:25225840-25225644 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 33-170
Cow position: chr14:2345175-2345034 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 33-218
Cow position: chr14:25228244-25228062 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 171, 31

Conread position: 36-202
Cow position: chr14:41837769-41837937 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 39-288
Cow position: chr14:34096471-34096716 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 117, 20

Conread position: 40-236
Cow position: chr14:19487387-19487196 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 164, 28

Conread position: 46-205
Cow position: chr14:25334152-25333991 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 49-194
Cow position: chr14:4848432-4848291 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 127, 10

Conread position: 53-202
Cow position: chr14:20826572-20826426 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 137, 22

Conread position: 55-288
Cow position: chr14:16457599-16457373 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 56-203
Cow position: chr14:10852112-10851965 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 61

Conread position: 56-277
Cow position: chr14:45577012-45577232 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 186, 13

Conread position: 59-202
Cow position: chr14:43868387-43868245 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 60-296
Cow position: chr14:12033163-12033386 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 85

Conread position: 62-202
Cow position: chr14:29734289-29734429 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 66-187
Cow position: chr14:20349658-20349777 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 117, 79

Show alignments to all cow chromosomes.