Cow genome map

Conread name: Ss1.1-Lng1-LNG010041H06.5

Conread position: 1-126
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 15, 124

Conread position: 1-131
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 1-147
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 31

Conread position: 1-168
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 17, 138

Conread position: 1-194
Cow position:
Alignm length: 196
Alignm identity: 156
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 39

Conread position: 1-203
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 66

Conread position: 1-217
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 78

Conread position: 1-219
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 15, 206

Conread position: 1-237
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 15, 209

Conread position: 1-237
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 236

Conread position: 1-240
Cow position:
Alignm length: 246
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 33

Conread position: 1-240
Cow position:
Alignm length: 255
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 1-240
Cow position:
Alignm length: 258
Alignm identity: 174
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 1-240
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 17, 125

Conread position: 1-240
Cow position:
Alignm length: 251
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 5, 173

Conread position: 1-296
Cow position:
Alignm length: 301
Alignm identity: 215
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 72

Conread position: 2-111
Cow position:
Alignm length: 112
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 59

Conread position: 2-159
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 2-161
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 32

Conread position: 2-182
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 72

Conread position: 2-194
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 59

Conread position: 2-194
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 2-201
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 155

Conread position: 2-202
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 2-205
Cow position:
Alignm length: 207
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 69

Conread position: 2-208
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 16, 139

Conread position: 2-232
Cow position:
Alignm length: 239
Alignm identity: 174
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 101

Conread position: 2-236
Cow position:
Alignm length: 247
Alignm identity: 179
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 68, 16

Conread position: 2-240
Cow position:
Alignm length: 250
Alignm identity: 174
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 13, 114

Conread position: 2-240
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 70, 16

Conread position: 2-296
Cow position:
Alignm length: 307
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 94

Conread position: 2-296
Cow position:
Alignm length: 303
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 149

Conread position: 2-296
Cow position:
Alignm length: 305
Alignm identity: 209
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 96

Conread position: 2-296
Cow position:
Alignm length: 302
Alignm identity: 216
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 14, 204

Conread position: 2-296
Cow position:
Alignm length: 303
Alignm identity: 211
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 18

Conread position: 3-240
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 152

Conread position: 3-296
Cow position:
Alignm length: 296
Alignm identity: 194
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 78

Conread position: 5-202
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 48

Conread position: 5-206
Cow position:
Alignm length: 208
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 66

Conread position: 5-240
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 15, 135

Conread position: 5-240
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 11, 61

Conread position: 5-240
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 200, 59

Conread position: 6-170
Cow position:
Alignm length: 169
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 6-182
Cow position:
Alignm length: 178
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 72

Conread position: 6-194
Cow position:
Alignm length: 193
Alignm identity: 132
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 6-205
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 6-219
Cow position:
Alignm length: 218
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 9, 125

Conread position: 6-223
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 27

Conread position: 6-233
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 191

Conread position: 6-234
Cow position:
Alignm length: 242
Alignm identity: 165
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 41, 192

Conread position: 6-234
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 159

Conread position: 6-237
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 155, 35

Conread position: 6-240
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 197, 0

Conread position: 6-240
Cow position:
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 131

Conread position: 6-296
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 59, 24

Conread position: 6-297
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 9, 39

Conread position: 7-218
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 175

Conread position: 7-237
Cow position:
Alignm length: 236
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 127

Conread position: 9-168
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 9-182
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 48, 13

Conread position: 9-194
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 65, 35

Conread position: 9-194
Cow position:
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 10-194
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 146, 41

Conread position: 10-237
Cow position:
Alignm length: 232
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 174, 0

Conread position: 12-205
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 53, 47

Conread position: 14-128
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 14-170
Cow position:
Alignm length: 161
Alignm identity: 131
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 14-182
Cow position:
Alignm length: 170
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 52

Conread position: 14-182
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 14-187
Cow position:
Alignm length: 174
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 14-192
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 125

Conread position: 14-194
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 45, 34

Conread position: 14-194
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 27

Conread position: 14-202
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 126

Conread position: 14-208
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 14-217
Cow position:
Alignm length: 208
Alignm identity: 156
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 54, 117

Conread position: 14-218
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 54, 19

Conread position: 14-222
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 49, 87

Conread position: 14-222
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 14-223
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 14-228
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 43, 118

Conread position: 14-235
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 57, 186

Conread position: 14-237
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 48, 176

Conread position: 14-240
Cow position:
Alignm length: 231
Alignm identity: 157
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 48, 124

Conread position: 14-240
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 17

Conread position: 14-243
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 117

Conread position: 14-293
Cow position:
Alignm length: 289
Alignm identity: 208
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 43, 59

Conread position: 14-296
Cow position:
Alignm length: 295
Alignm identity: 206
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 126

Conread position: 14-306
Cow position:
Alignm length: 297
Alignm identity: 191
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 275, 191

Conread position: 15-200
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 56

Conread position: 15-234
Cow position:
Alignm length: 220
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 16-203
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 19

Conread position: 18-240
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 51, 14

Conread position: 20-194
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 22-296
Cow position:
Alignm length: 281
Alignm identity: 200
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 43, 116

Conread position: 24-194
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 24-202
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 37, 60

Conread position: 24-296
Cow position:
Alignm length: 283
Alignm identity: 203
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 39, 68

Conread position: 25-168
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 20

Conread position: 25-199
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 42, 107

Conread position: 25-202
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 28-206
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 160

Conread position: 28-292
Cow position:
Alignm length: 274
Alignm identity: 178
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 29-222
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 29-236
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 25, 111

Conread position: 29-240
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 17

Conread position: 30-237
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 32, 109

Conread position: 33-194
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 33-201
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 31, 109

Conread position: 34-205
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 34-224
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 92

Conread position: 34-248
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 170, 31

Conread position: 36-237
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 199

Conread position: 38-181
Cow position:
Alignm length: 145
Alignm identity: 120
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 29, 97

Conread position: 58-240
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 59-277
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 129, 75

Conread position: 64-288
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 71

Conread position: 66-202
Cow position:
Alignm length: 137
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.