Cow genome map

Conread name: Ss1.1-Lng1-LNG010041H06.5

Conread position: 1-194
Cow position: chr16:42444058-42444256 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-194
Cow position: chr16:51598703-51598513 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 59

Conread position: 1-201
Cow position: chr16:21039930-21040134 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 15, 34

Conread position: 1-201
Cow position: chr16:26649727-26649522 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 15, 0

Conread position: 1-201
Cow position: chr16:48494653-48494447 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 1-202
Cow position: chr16:7504990-7505192 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 159

Conread position: 1-202
Cow position: chr16:13689567-13689774 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 1-202
Cow position: chr16:32781268-32781471 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 138

Conread position: 1-202
Cow position: chr16:47964913-47964711 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 15, 63

Conread position: 1-203
Cow position: chr16:4626489-4626282 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 33

Conread position: 1-203
Cow position: chr16:51500836-51501038 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 46

Conread position: 1-216
Cow position: chr16:5636492-5636706 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 22

Conread position: 1-237
Cow position: chr16:40333424-40333183 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 119

Conread position: 1-240
Cow position: chr16:10504735-10504972 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 21, 62

Conread position: 1-240
Cow position: chr16:49126286-49126037 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 115

Conread position: 1-292
Cow position: chr16:11422213-11422495 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 15, 44

Conread position: 1-293
Cow position: chr16:45121941-45122222 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 57

Conread position: 1-296
Cow position: chr16:14106548-14106828 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 51

Conread position: 1-296
Cow position: chr16:17945422-17945725 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 15, 0

Conread position: 1-296
Cow position: chr16:21762069-21761764 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 86

Conread position: 1-296
Cow position: chr16:42092481-42092194 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 198
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 33

Conread position: 2-156
Cow position: chr16:1725174-1725012 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 150

Conread position: 2-170
Cow position: chr16:13752221-13752056 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 62

Conread position: 2-182
Cow position: chr16:11105456-11105642 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 2-196
Cow position: chr16:9904994-9905191 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 14, 72

Conread position: 2-202
Cow position: chr16:17282568-17282766 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 30

Conread position: 2-202
Cow position: chr16:19408613-19408420 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 57

Conread position: 2-202
Cow position: chr16:20025350-20025549 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 134

Conread position: 2-202
Cow position: chr16:22919377-22919575 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 28

Conread position: 2-202
Cow position: chr16:24855445-24855648 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 134

Conread position: 2-202
Cow position: chr16:33645918-33646123 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 32

Conread position: 2-203
Cow position: chr16:11790920-11791119 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 46

Conread position: 2-203
Cow position: chr16:31117711-31117506 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 107

Conread position: 2-205
Cow position: chr16:41578129-41578337 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 2-209
Cow position: chr16:50417784-50417581 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 55

Conread position: 2-216
Cow position: chr16:48191098-48190889 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 45

Conread position: 2-233
Cow position: chr16:13989885-13990114 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 19, 65

Conread position: 2-236
Cow position: chr16:45139575-45139815 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 136

Conread position: 2-237
Cow position: chr16:46433426-46433173 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 2-240
Cow position: chr16:11660543-11660315 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 63

Conread position: 2-240
Cow position: chr16:14125047-14125276 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 14, 47

Conread position: 2-240
Cow position: chr16:25839522-25839766 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 14, 0

Conread position: 2-240
Cow position: chr16:33704710-33704957 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 97

Conread position: 2-240
Cow position: chr16:39474242-39474001 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 47

Conread position: 2-240
Cow position: chr16:45676949-45676716 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 57

Conread position: 2-240
Cow position: chr16:47518741-47518987 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 207

Conread position: 2-240
Cow position: chr16:52275227-52274980 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 2-276
Cow position: chr16:37669833-37669558 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 14, 231

Conread position: 2-283
Cow position: chr16:33198531-33198260 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 77, 30

Conread position: 2-293
Cow position: chr16:7075817-7076100 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 138

Conread position: 2-296
Cow position: chr16:9973595-9973298 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 70

Conread position: 2-296
Cow position: chr16:16597464-16597743 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 20, 78

Conread position: 2-299
Cow position: chr16:47643318-47643621 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 14, 44

Conread position: 2-303
Cow position: chr16:10592338-10592634 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 14, 123

Conread position: 2-304
Cow position: chr16:34754057-34753760 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 14, 199

Conread position: 3-150
Cow position: chr16:50532959-50533109 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 145

Conread position: 3-202
Cow position: chr16:39402099-39401908 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 14, 21

Conread position: 3-240
Cow position: chr16:56853840-56854077 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 67, 29

Conread position: 5-168
Cow position: chr16:54710127-54709965 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 62

Conread position: 5-182
Cow position: chr16:45554349-45554531 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 5-183
Cow position: chr16:12060323-12060505 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 56

Conread position: 5-194
Cow position: chr16:12320128-12320321 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 29

Conread position: 5-201
Cow position: chr16:8737971-8738172 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 5-202
Cow position: chr16:32807386-32807185 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 137

Conread position: 5-205
Cow position: chr16:32970172-32969970 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 113

Conread position: 5-206
Cow position: chr16:50873258-50873056 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 10, 52

Conread position: 5-208
Cow position: chr16:56231733-56231941 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 11, 42

Conread position: 5-216
Cow position: chr16:48340790-48340572 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 0

Conread position: 5-238
Cow position: chr16:11939948-11940180 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 50

Conread position: 5-240
Cow position: chr16:3047435-3047188 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 11, 137

Conread position: 5-240
Cow position: chr16:4275835-4275588 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 137

Conread position: 6-161
Cow position: chr16:13578954-13578794 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 6-161
Cow position: chr16:18036856-18037016 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 6-161
Cow position: chr16:23730019-23729857 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 6-161
Cow position: chr16:53048461-53048619 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 69

Conread position: 6-163
Cow position: chr16:31978277-31978117 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 27

Conread position: 6-170
Cow position: chr16:4910619-4910449 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 6-170
Cow position: chr16:54579073-54579242 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 123

Conread position: 6-182
Cow position: chr16:8323073-8322894 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 6-194
Cow position: chr16:14242279-14242468 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 7, 111

Conread position: 6-194
Cow position: chr16:27160958-27160764 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 6-194
Cow position: chr16:31149300-31149477 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 6-194
Cow position: chr16:52133605-52133417 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 65

Conread position: 6-202
Cow position: chr16:54226691-54226492 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 134

Conread position: 6-203
Cow position: chr16:53509075-53508876 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 10, 132

Conread position: 6-219
Cow position: chr16:41697178-41696967 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 12, 52

Conread position: 6-219
Cow position: chr16:42176551-42176770 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 191

Conread position: 6-234
Cow position: chr16:42242208-42241974 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 153

Conread position: 6-236
Cow position: chr16:33596026-33595797 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 10, 68

Conread position: 6-238
Cow position: chr16:35188162-35188393 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 10, 160

Conread position: 6-240
Cow position: chr16:10148188-10148422 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 189

Conread position: 6-240
Cow position: chr16:36121072-36120841 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 59

Conread position: 6-274
Cow position: chr16:8933516-8933250 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 135

Conread position: 6-275
Cow position: chr16:54734153-54734411 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 53

Conread position: 9-173
Cow position: chr16:16402408-16402248 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 46, 62

Conread position: 9-202
Cow position: chr16:33054571-33054373 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 9-219
Cow position: chr16:54679581-54679791 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 38

Conread position: 9-240
Cow position: chr16:33226626-33226383 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 137

Conread position: 10-182
Cow position: chr16:5363809-5363989 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 10-194
Cow position: chr16:42340108-42340296 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 10-202
Cow position: chr16:16933032-16933227 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 57, 179

Conread position: 10-203
Cow position: chr16:25170307-25170502 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 10-223
Cow position: chr16:17903736-17903514 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 11-182
Cow position: chr16:35501343-35501502 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 11-218
Cow position: chr16:8366912-8366705 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 19

Conread position: 12-194
Cow position: chr16:36203709-36203519 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 47, 182

Conread position: 12-296
Cow position: chr16:3303940-3304220 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 6, 70

Conread position: 14-123
Cow position: chr16:24148075-24148190 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 14-146
Cow position: chr16:35477499-35477363 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 14-158
Cow position: chr16:22124049-22123906 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 117

Conread position: 14-170
Cow position: chr16:19047518-19047358 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 14-170
Cow position: chr16:48146740-48146584 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 126, 19

Conread position: 14-171
Cow position: chr16:35937255-35937414 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 113

Conread position: 14-182
Cow position: chr16:19052557-19052723 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 17

Conread position: 14-182
Cow position: chr16:48370033-48369864 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 124

Conread position: 14-188
Cow position: chr16:39514158-39513982 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 18

Conread position: 14-194
Cow position: chr16:18402602-18402786 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 48

Conread position: 14-194
Cow position: chr16:40562148-40562332 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 14-194
Cow position: chr16:42345686-42345513 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 16

Conread position: 14-198
Cow position: chr16:14685472-14685286 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 148, 55

Conread position: 14-200
Cow position: chr16:52169974-52170161 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 18

Conread position: 14-202
Cow position: chr16:3114455-3114647 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 14-202
Cow position: chr16:4857184-4856994 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 43, 125

Conread position: 14-202
Cow position: chr16:5256911-5257104 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 14-202
Cow position: chr16:17288864-17289055 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 14-202
Cow position: chr16:33134859-33135045 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 109

Conread position: 14-202
Cow position: chr16:34220101-34220294 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 44, 182

Conread position: 14-202
Cow position: chr16:47820484-47820675 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 51, 120

Conread position: 14-203
Cow position: chr16:20069749-20069941 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 14-203
Cow position: chr16:42078923-42078739 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 14-205
Cow position: chr16:25386892-25387084 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 52, 111

Conread position: 14-205
Cow position: chr16:38708913-38708726 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 133, 45

Conread position: 14-210
Cow position: chr16:27659833-27659630 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 60, 31

Conread position: 14-210
Cow position: chr16:52834972-52834770 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 14-212
Cow position: chr16:52789969-52790172 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 43, 148

Conread position: 14-215
Cow position: chr16:55233606-55233803 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 12

Conread position: 14-218
Cow position: chr16:17135142-17134936 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 18

Conread position: 14-219
Cow position: chr16:18141411-18141204 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 118

Conread position: 14-219
Cow position: chr16:48398341-48398129 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 14-234
Cow position: chr16:45731471-45731253 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 167

Conread position: 14-236
Cow position: chr16:16570832-16571051 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 44, 123

Conread position: 14-236
Cow position: chr16:31079173-31078949 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 45, 27

Conread position: 14-237
Cow position: chr16:27701335-27701111 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 162, 31

Conread position: 14-237
Cow position: chr16:48095846-48095617 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 72, 0

Conread position: 14-240
Cow position: chr16:2417672-2417431 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 54

Conread position: 14-240
Cow position: chr16:7418303-7418531 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 190, 44

Conread position: 14-240
Cow position: chr16:40514563-40514338 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 58, 183

Conread position: 14-240
Cow position: chr16:45677894-45678133 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 8, 0

Conread position: 14-240
Cow position: chr16:50289067-50289306 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 14-277
Cow position: chr16:4059272-4059530 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 162

Conread position: 14-296
Cow position: chr16:13611536-13611254 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 46

Conread position: 14-296
Cow position: chr16:33869843-33869566 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 180
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 202, 55

Conread position: 14-296
Cow position: chr16:53089423-53089149 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 170, 49

Conread position: 14-296
Cow position: chr16:56796748-56796470 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 208

Conread position: 14-303
Cow position: chr16:53792901-53792616 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 209

Conread position: 15-194
Cow position: chr16:7549885-7550067 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 148

Conread position: 15-194
Cow position: chr16:30359142-30358963 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 15-201
Cow position: chr16:42240968-42241154 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 43

Conread position: 15-283
Cow position: chr16:29608437-29608696 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 17-259
Cow position: chr16:40700808-40700568 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 120

Conread position: 18-202
Cow position: chr16:30305893-30305706 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 42, 121

Conread position: 18-202
Cow position: chr16:48956720-48956906 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 55, 25

Conread position: 18-205
Cow position: chr16:50370517-50370707 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 20-182
Cow position: chr16:31122330-31122162 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 12

Conread position: 20-240
Cow position: chr16:9552984-9553209 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 97

Conread position: 23-189
Cow position: chr16:29527750-29527926 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 23-296
Cow position: chr16:44239330-44239610 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 194

Conread position: 24-168
Cow position: chr16:45645767-45645614 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 41, 120

Conread position: 24-194
Cow position: chr16:22206999-22207178 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 135

Conread position: 24-218
Cow position: chr16:9985473-9985269 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 196

Conread position: 25-242
Cow position: chr16:11135054-11134828 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 27-218
Cow position: chr16:496445-496252 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 28-296
Cow position: chr16:42977394-42977658 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 175

Conread position: 30-203
Cow position: chr16:20824417-20824586 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 30-218
Cow position: chr16:31561685-31561881 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 31-218
Cow position: chr16:45294477-45294673 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 34-240
Cow position: chr16:11584460-11584252 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 83, 35

Conread position: 35-296
Cow position: chr16:31880824-31880568 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 24, 72

Conread position: 36-194
Cow position: chr16:19643824-19643989 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 37-218
Cow position: chr16:21370240-21370064 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 167, 20

Conread position: 38-293
Cow position: chr16:15945305-15945071 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 250, 21

Conread position: 53-202
Cow position: chr16:33235203-33235056 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 14, 82

Conread position: 55-215
Cow position: chr16:19815284-19815128 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 55-240
Cow position: chr16:37401211-37401394 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 132

Conread position: 58-296
Cow position: chr16:17460131-17460361 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 54, 135

Conread position: 63-194
Cow position: chr16:17292052-17291922 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 65-240
Cow position: chr16:1582955-1582771 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 137, 0

Conread position: 65-240
Cow position: chr16:32893599-32893774 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 139, 161

Conread position: 88-237
Cow position: chr16:34205070-34204913 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 92-296
Cow position: chr16:29145284-29145071 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 151

Show alignments to all cow chromosomes.