Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010041H06.5 |
| Conread position: | 1-164 |
| Cow position: | chr17:38647003-38647171 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-182 |
| Cow position: | chr17:4968057-4968240 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-193 |
| Cow position: | chr17:3503524-3503720 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 19, 115 |
| Conread position: | 1-194 |
| Cow position: | chr17:21003885-21003690 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 15, 139 |
| Conread position: | 1-202 |
| Cow position: | chr17:31037437-31037229 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-204 |
| Cow position: | chr17:18495577-18495372 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 140 |
| Conread position: | 1-218 |
| Cow position: | chr17:1410296-1410073 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-233 |
| Cow position: | chr17:34791123-34790877 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-237 |
| Cow position: | chr17:12511029-12510792 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 1-238 |
| Cow position: | chr17:33933805-33933556 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-240 |
| Cow position: | chr17:1025877-1025639 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 60 |
| Conread position: | 1-240 |
| Cow position: | chr17:5000635-5000406 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 50 |
| Conread position: | 1-240 |
| Cow position: | chr17:18109142-18108891 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 195 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 15, 138 |
| Conread position: | 1-240 |
| Cow position: | chr17:33793108-33793351 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 1-335 |
| Cow position: | chr17:25616201-25616529 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 5, 50 |
| Conread position: | 2-126 |
| Cow position: | chr17:10510714-10510585 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-132 |
| Cow position: | chr17:15333768-15333632 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-160 |
| Cow position: | chr17:25541875-25541711 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-170 |
| Cow position: | chr17:18592388-18592558 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 62, 14 |
| Conread position: | 2-170 |
| Cow position: | chr17:21478978-21478806 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 139 |
| Conread position: | 2-181 |
| Cow position: | chr17:14762175-14761995 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 32 |
| Conread position: | 2-182 |
| Cow position: | chr17:20990250-20990062 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 2-194 |
| Cow position: | chr17:32273742-32273547 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 2-202 |
| Cow position: | chr17:9911709-9911905 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 2-202 |
| Cow position: | chr17:21115006-21114806 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 2-202 |
| Cow position: | chr17:24587566-24587772 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-202 |
| Cow position: | chr17:24821810-24822009 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 88, 55 |
| Conread position: | 2-202 |
| Cow position: | chr17:25514179-25513975 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 2-203 |
| Cow position: | chr17:9824613-9824818 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 2-203 |
| Cow position: | chr17:21758194-21757992 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 14, 72 |
| Conread position: | 2-203 |
| Cow position: | chr17:23516998-23516794 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 14, 198 |
| Conread position: | 2-210 |
| Cow position: | chr17:23563846-23563641 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 54 |
| Conread position: | 2-213 |
| Cow position: | chr17:1040690-1040903 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 14, 185 |
| Conread position: | 2-218 |
| Cow position: | chr17:25128404-25128187 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 2-218 |
| Cow position: | chr17:33658126-33657907 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 14, 176 |
| Conread position: | 2-237 |
| Cow position: | chr17:23101264-23101030 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 20, 64 |
| Conread position: | 2-240 |
| Cow position: | chr17:5372585-5372337 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-240 |
| Cow position: | chr17:12536524-12536279 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-240 |
| Cow position: | chr17:24973896-24974138 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 2-240 |
| Cow position: | chr17:25612033-25612282 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 18, 47 |
| Conread position: | 2-277 |
| Cow position: | chr17:29157361-29157659 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 61, 138 |
| Conread position: | 2-287 |
| Cow position: | chr17:24553953-24554236 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 63 |
| Conread position: | 2-293 |
| Cow position: | chr17:4225549-4225265 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 202, 56 |
| Conread position: | 2-296 |
| Cow position: | chr17:11664644-11664353 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 11, 178 |
| Conread position: | 2-296 |
| Cow position: | chr17:15340808-15340501 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 2-296 |
| Cow position: | chr17:32138475-32138192 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 2-296 |
| Cow position: | chr17:40331711-40332003 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 3-296 |
| Cow position: | chr17:3153626-3153344 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 5-202 |
| Cow position: | chr17:1634542-1634344 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 71, 27 |
| Conread position: | 5-205 |
| Cow position: | chr17:20022569-20022363 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 11, 185 |
| Conread position: | 5-206 |
| Cow position: | chr17:40421617-40421823 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 5-219 |
| Cow position: | chr17:35126655-35126882 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-240 |
| Cow position: | chr17:908690-908934 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 5-296 |
| Cow position: | chr17:30713296-30713570 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 6-170 |
| Cow position: | chr17:38614907-38615076 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 6-182 |
| Cow position: | chr17:21039512-21039685 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 6-194 |
| Cow position: | chr17:12591115-12591314 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 6-194 |
| Cow position: | chr17:20157555-20157747 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 6-194 |
| Cow position: | chr17:27203095-27202906 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 10, 61 |
| Conread position: | 6-196 |
| Cow position: | chr17:16158439-16158633 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 6-196 |
| Cow position: | chr17:20780459-20780657 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 6-196 |
| Cow position: | chr17:20848471-20848664 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 6-202 |
| Cow position: | chr17:22051644-22051442 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 10, 64 |
| Conread position: | 6-218 |
| Cow position: | chr17:7590509-7590299 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 6-240 |
| Cow position: | chr17:6423709-6423949 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 209 |
| Conread position: | 6-240 |
| Cow position: | chr17:12447454-12447208 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 12, 170 |
| Conread position: | 6-240 |
| Cow position: | chr17:18934205-18934453 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 12, 135 |
| Conread position: | 6-240 |
| Cow position: | chr17:24883619-24883375 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 10, 60 |
| Conread position: | 6-240 |
| Cow position: | chr17:25815549-25815790 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 188 |
| Conread position: | 6-296 |
| Cow position: | chr17:21325281-21325568 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 7-202 |
| Cow position: | chr17:32419162-32418968 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 7-237 |
| Cow position: | chr17:28285079-28284840 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 62, 21 |
| Conread position: | 9-165 |
| Cow position: | chr17:31231160-31231012 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 9-169 |
| Cow position: | chr17:35338964-35338806 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 58 |
| Conread position: | 9-212 |
| Cow position: | chr17:11368898-11368689 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 151 |
| Conread position: | 9-240 |
| Cow position: | chr17:36331005-36330773 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 11-235 |
| Cow position: | chr17:24750872-24751107 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 116, 47 |
| Conread position: | 12-194 |
| Cow position: | chr17:40638906-40639086 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 47, 60 |
| Conread position: | 12-205 |
| Cow position: | chr17:40406400-40406595 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 12-240 |
| Cow position: | chr17:24004327-24004568 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 13-209 |
| Cow position: | chr17:21243832-21243635 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 125 |
| Conread position: | 13-218 |
| Cow position: | chr17:6318910-6318703 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 14-132 |
| Cow position: | chr17:20269689-20269810 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 100 |
| Conread position: | 14-176 |
| Cow position: | chr17:25032525-25032360 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 14-182 |
| Cow position: | chr17:35573715-35573880 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 14-187 |
| Cow position: | chr17:37816232-37816060 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 14-194 |
| Cow position: | chr17:5423112-5422929 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 14-196 |
| Cow position: | chr17:21489665-21489484 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 56, 85 |
| Conread position: | 14-201 |
| Cow position: | chr17:9853945-9854123 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 14-202 |
| Cow position: | chr17:24787065-24786876 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 53, 145 |
| Conread position: | 14-202 |
| Cow position: | chr17:30728469-30728652 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 14-203 |
| Cow position: | chr17:979197-979018 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 14-203 |
| Cow position: | chr17:10458979-10458783 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 14-217 |
| Cow position: | chr17:38263535-38263326 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 14-218 |
| Cow position: | chr17:265628-265834 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 51, 95 |
| Conread position: | 14-218 |
| Cow position: | chr17:15102932-15102728 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 190, 29 |
| Conread position: | 14-218 |
| Cow position: | chr17:32989434-32989640 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 14-218 |
| Cow position: | chr17:32993666-32993460 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 14-219 |
| Cow position: | chr17:20993081-20992876 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 102 |
| Conread position: | 14-219 |
| Cow position: | chr17:25097421-25097619 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 90 |
| Conread position: | 14-234 |
| Cow position: | chr17:32471826-32471599 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 14-237 |
| Cow position: | chr17:1063138-1063363 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 102, 56 |
| Conread position: | 14-237 |
| Cow position: | chr17:13922437-13922674 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 14-237 |
| Cow position: | chr17:25126310-25126536 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 14-240 |
| Cow position: | chr17:4299971-4299747 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 117, 55 |
| Conread position: | 14-240 |
| Cow position: | chr17:4601586-4601366 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 14-240 |
| Cow position: | chr17:11912545-11912310 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 14-240 |
| Cow position: | chr17:25800924-25800689 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 14-240 |
| Cow position: | chr17:33155197-33154963 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 90 |
| Conread position: | 14-240 |
| Cow position: | chr17:36864589-36864818 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 49, 22 |
| Conread position: | 14-240 |
| Cow position: | chr17:39606388-39606620 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 14-240 |
| Cow position: | chr17:40851935-40852162 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 14-241 |
| Cow position: | chr17:3577494-3577723 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 43, 175 |
| Conread position: | 14-241 |
| Cow position: | chr17:5767867-5768095 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 50, 45 |
| Conread position: | 14-242 |
| Cow position: | chr17:17059384-17059615 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 19 |
| Conread position: | 14-243 |
| Cow position: | chr17:29715240-29715014 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 34 |
| Conread position: | 14-296 |
| Cow position: | chr17:7810786-7810523 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 162, 45 |
| Conread position: | 14-296 |
| Cow position: | chr17:9117605-9117905 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 170, 55 |
| Conread position: | 14-296 |
| Cow position: | chr17:10432018-10431740 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 131, 199 |
| Conread position: | 14-296 |
| Cow position: | chr17:22017129-22016840 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 52, 148 |
| Conread position: | 14-296 |
| Cow position: | chr17:35051565-35051844 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 170, 51 |
| Conread position: | 15-205 |
| Cow position: | chr17:18473132-18473314 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 188, 9 |
| Conread position: | 15-218 |
| Cow position: | chr17:4106033-4105826 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 47, 17 |
| Conread position: | 15-218 |
| Cow position: | chr17:4121769-4121561 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 50, 17 |
| Conread position: | 15-296 |
| Cow position: | chr17:25901156-25901432 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 194 |
| Conread position: | 18-203 |
| Cow position: | chr17:40289033-40288851 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 18-218 |
| Cow position: | chr17:17044371-17044169 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 45, 169 |
| Conread position: | 18-283 |
| Cow position: | chr17:24824204-24824459 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 188 |
| Conread position: | 22-201 |
| Cow position: | chr17:11306186-11306356 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 23-226 |
| Cow position: | chr17:32333125-32332918 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 24-169 |
| Cow position: | chr17:8948996-8948849 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 24-237 |
| Cow position: | chr17:40412554-40412771 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 170, 41 |
| Conread position: | 28-201 |
| Cow position: | chr17:25511214-25511391 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 62 |
| Conread position: | 28-238 |
| Cow position: | chr17:33288687-33288465 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 29-202 |
| Cow position: | chr17:29995465-29995288 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 33-205 |
| Cow position: | chr17:26575254-26575072 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 33-240 |
| Cow position: | chr17:12959082-12959296 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 34-182 |
| Cow position: | chr17:18848183-18848030 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 34-240 |
| Cow position: | chr17:12325785-12325575 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 34-240 |
| Cow position: | chr17:29084158-29084365 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 170, 24 |
| Conread position: | 35-240 |
| Cow position: | chr17:21793874-21793678 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 27, 64 |
| Conread position: | 36-182 |
| Cow position: | chr17:7851067-7851215 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 36-296 |
| Cow position: | chr17:22048811-22048534 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 38-196 |
| Cow position: | chr17:11478747-11478911 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 39-240 |
| Cow position: | chr17:9932319-9932116 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 28, 161 |
| Conread position: | 54-203 |
| Cow position: | chr17:37341036-37340882 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 108, 10 |
| Conread position: | 54-203 |
| Cow position: | chr17:43315285-43315140 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 54-228 |
| Cow position: | chr17:27666105-27665933 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 57-240 |
| Cow position: | chr17:42150394-42150583 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 58-222 |
| Cow position: | chr17:12556574-12556735 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 88 |
| Conread position: | 79-202 |
| Cow position: | chr17:18109524-18109401 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 83-288 |
| Cow position: | chr17:9713313-9713106 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 159, 145 |
Show alignments to all cow chromosomes.