Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010041H06.5 |
| Conread position: | 1-151 |
| Cow position: | chr18:33407485-33407640 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-170 |
| Cow position: | chr18:4540009-4539840 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 60 |
| Conread position: | 1-181 |
| Cow position: | chr18:11183815-11183993 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 60 |
| Conread position: | 1-182 |
| Cow position: | chr18:6309951-6310136 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 139 |
| Conread position: | 1-194 |
| Cow position: | chr18:19619822-19620008 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 1-194 |
| Cow position: | chr18:34527229-34527029 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 1-195 |
| Cow position: | chr18:4381160-4381360 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 8, 137 |
| Conread position: | 1-202 |
| Cow position: | chr18:33158824-33159016 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 58 |
| Conread position: | 1-218 |
| Cow position: | chr18:50382127-50382340 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 182, 62 |
| Conread position: | 1-235 |
| Cow position: | chr18:47511875-47512115 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 40 |
| Conread position: | 1-237 |
| Cow position: | chr18:8171216-8170973 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-240 |
| Cow position: | chr18:25006619-25006385 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 15, 59 |
| Conread position: | 1-240 |
| Cow position: | chr18:44262499-44262744 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 63, 9 |
| Conread position: | 1-241 |
| Cow position: | chr18:28101501-28101752 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 15, 116 |
| Conread position: | 1-296 |
| Cow position: | chr18:11691538-11691256 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 2-151 |
| Cow position: | chr18:11831999-11832143 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 2-161 |
| Cow position: | chr18:9557854-9558011 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 2-161 |
| Cow position: | chr18:23623762-23623600 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-168 |
| Cow position: | chr18:12023764-12023597 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 94 |
| Conread position: | 2-170 |
| Cow position: | chr18:13507868-13507698 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 138 |
| Conread position: | 2-182 |
| Cow position: | chr18:23766542-23766355 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-194 |
| Cow position: | chr18:31711695-31711495 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 2-202 |
| Cow position: | chr18:36201757-36201555 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 14, 82 |
| Conread position: | 2-202 |
| Cow position: | chr18:44802017-44801815 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 2-202 |
| Cow position: | chr18:45570885-45571086 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 66, 144 |
| Conread position: | 2-203 |
| Cow position: | chr18:45904023-45903822 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 14, 39 |
| Conread position: | 2-205 |
| Cow position: | chr18:55787799-55787998 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 121 |
| Conread position: | 2-217 |
| Cow position: | chr18:28923965-28923754 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 2-218 |
| Cow position: | chr18:47183412-47183205 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 2-219 |
| Cow position: | chr18:4796843-4797067 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 16, 32 |
| Conread position: | 2-222 |
| Cow position: | chr18:49100499-49100274 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 2-236 |
| Cow position: | chr18:5578177-5578412 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 113 |
| Conread position: | 2-236 |
| Cow position: | chr18:48451929-48452182 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 108 |
| Conread position: | 2-237 |
| Cow position: | chr18:9974453-9974212 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 15, 65 |
| Conread position: | 2-237 |
| Cow position: | chr18:38985562-38985809 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 209 |
| Conread position: | 2-237 |
| Cow position: | chr18:48713420-48713660 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 14, 126 |
| Conread position: | 2-240 |
| Cow position: | chr18:18592346-18592585 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 16, 54 |
| Conread position: | 2-240 |
| Cow position: | chr18:29356756-29356512 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-242 |
| Cow position: | chr18:33299772-33300012 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 12, 65 |
| Conread position: | 2-275 |
| Cow position: | chr18:56183812-56184076 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 85, 57 |
| Conread position: | 2-296 |
| Cow position: | chr18:25647381-25647068 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 14, 139 |
| Conread position: | 2-296 |
| Cow position: | chr18:33007931-33008234 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 207 |
| Conread position: | 2-296 |
| Cow position: | chr18:39875388-39875095 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 2-296 |
| Cow position: | chr18:42479717-42479430 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 11, 197 |
| Conread position: | 3-165 |
| Cow position: | chr18:30248263-30248102 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 64, 133 |
| Conread position: | 3-281 |
| Cow position: | chr18:52403098-52402826 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 58, 146 |
| Conread position: | 5-132 |
| Cow position: | chr18:44549041-44548908 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 5-152 |
| Cow position: | chr18:45079599-45079449 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 52, 142 |
| Conread position: | 5-188 |
| Cow position: | chr18:5487122-5487302 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 17, 56 |
| Conread position: | 5-202 |
| Cow position: | chr18:50082376-50082183 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 5-202 |
| Cow position: | chr18:51190717-51190525 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 73, 27 |
| Conread position: | 5-202 |
| Cow position: | chr18:51594928-51594730 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 5-203 |
| Cow position: | chr18:55505281-55505479 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 11, 77 |
| Conread position: | 5-236 |
| Cow position: | chr18:49038335-49038576 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 5-240 |
| Cow position: | chr18:6881474-6881235 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 5-240 |
| Cow position: | chr18:9010595-9010826 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 5-240 |
| Cow position: | chr18:10904723-10904968 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 5-240 |
| Cow position: | chr18:42432220-42431971 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 11, 140 |
| Conread position: | 5-292 |
| Cow position: | chr18:3085641-3085361 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 77 |
| Conread position: | 5-296 |
| Cow position: | chr18:42751738-42751438 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 11, 169 |
| Conread position: | 6-143 |
| Cow position: | chr18:29991637-29991495 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 6-170 |
| Cow position: | chr18:6609983-6609815 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 6-170 |
| Cow position: | chr18:19687895-19688066 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 6-176 |
| Cow position: | chr18:4556291-4556121 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 10, 129 |
| Conread position: | 6-182 |
| Cow position: | chr18:20174254-20174075 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 6-182 |
| Cow position: | chr18:38686965-38687134 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 13, 53 |
| Conread position: | 6-193 |
| Cow position: | chr18:29796550-29796363 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 10, 66 |
| Conread position: | 6-194 |
| Cow position: | chr18:34834365-34834558 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 10, 105 |
| Conread position: | 6-202 |
| Cow position: | chr18:1571362-1571163 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 10, 112 |
| Conread position: | 6-202 |
| Cow position: | chr18:37002508-37002706 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 6-219 |
| Cow position: | chr18:46048635-46048843 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 6-236 |
| Cow position: | chr18:9089574-9089811 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 28 |
| Conread position: | 6-240 |
| Cow position: | chr18:19193491-19193251 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 6-240 |
| Cow position: | chr18:29958282-29958052 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 6-283 |
| Cow position: | chr18:33896555-33896275 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 10, 229 |
| Conread position: | 6-296 |
| Cow position: | chr18:36458808-36459102 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 10, 126 |
| Conread position: | 6-296 |
| Cow position: | chr18:37023678-37023387 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 225 |
| Conread position: | 6-296 |
| Cow position: | chr18:43555650-43555363 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 10, 210 |
| Conread position: | 6-299 |
| Cow position: | chr18:22056005-22055709 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 10, 208 |
| Conread position: | 9-182 |
| Cow position: | chr18:10891393-10891568 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 9-201 |
| Cow position: | chr18:12242154-12242347 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 50, 124 |
| Conread position: | 9-202 |
| Cow position: | chr18:2849392-2849195 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 9-223 |
| Cow position: | chr18:3370776-3370996 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 8, 132 |
| Conread position: | 10-125 |
| Cow position: | chr18:41258023-41257905 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 10-202 |
| Cow position: | chr18:29759906-29760101 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 10-296 |
| Cow position: | chr18:40759087-40759371 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 194 |
| Conread position: | 11-240 |
| Cow position: | chr18:50095516-50095288 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 65, 121 |
| Conread position: | 12-240 |
| Cow position: | chr18:9066575-9066821 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 14-163 |
| Cow position: | chr18:45104560-45104406 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 14-169 |
| Cow position: | chr18:4602128-4601977 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 107 |
| Conread position: | 14-181 |
| Cow position: | chr18:44483887-44483720 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-193 |
| Cow position: | chr18:21740925-21740750 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 14-194 |
| Cow position: | chr18:29058609-29058435 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 59, 88 |
| Conread position: | 14-202 |
| Cow position: | chr18:10977328-10977137 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 120 |
| Conread position: | 14-202 |
| Cow position: | chr18:20641604-20641422 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 14-202 |
| Cow position: | chr18:42431728-42431537 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 14-210 |
| Cow position: | chr18:18369478-18369280 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 41, 107 |
| Conread position: | 14-213 |
| Cow position: | chr18:52406586-52406777 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 14-214 |
| Cow position: | chr18:23162777-23162973 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 101 |
| Conread position: | 14-216 |
| Cow position: | chr18:26938864-26939071 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 14-218 |
| Cow position: | chr18:16686452-16686245 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 14-219 |
| Cow position: | chr18:35535266-35535055 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 14-230 |
| Cow position: | chr18:55000859-55000634 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 146 |
| Conread position: | 14-235 |
| Cow position: | chr18:46452996-46452767 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 14-235 |
| Cow position: | chr18:55119754-55119985 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 14-236 |
| Cow position: | chr18:23630721-23630498 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 14-237 |
| Cow position: | chr18:20462810-20462589 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 178 |
| Conread position: | 14-240 |
| Cow position: | chr18:2146701-2146471 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 14-240 |
| Cow position: | chr18:10575987-10576224 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 14-240 |
| Cow position: | chr18:15613975-15613743 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 14-240 |
| Cow position: | chr18:20126190-20126413 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 51, 33 |
| Conread position: | 14-240 |
| Cow position: | chr18:31672625-31672397 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 178, 75 |
| Conread position: | 14-240 |
| Cow position: | chr18:32883191-32883417 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 41, 120 |
| Conread position: | 14-240 |
| Cow position: | chr18:49017387-49017607 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 44, 99 |
| Conread position: | 14-240 |
| Cow position: | chr18:56181579-56181338 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 43, 162 |
| Conread position: | 14-241 |
| Cow position: | chr18:50959370-50959611 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 118 |
| Conread position: | 14-282 |
| Cow position: | chr18:36230840-36230569 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 53, 86 |
| Conread position: | 14-283 |
| Cow position: | chr18:49841163-49841422 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 54, 121 |
| Conread position: | 14-287 |
| Cow position: | chr18:12270385-12270652 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 54, 25 |
| Conread position: | 14-288 |
| Cow position: | chr18:30360259-30360002 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 81, 44 |
| Conread position: | 14-296 |
| Cow position: | chr18:1954704-1954430 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 14-296 |
| Cow position: | chr18:17391098-17390840 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 276, 45 |
| Conread position: | 14-307 |
| Cow position: | chr18:8299900-8300183 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 147 |
| Conread position: | 15-194 |
| Cow position: | chr18:9365802-9365987 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 15-201 |
| Cow position: | chr18:28658023-28657838 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 15-206 |
| Cow position: | chr18:10954364-10954544 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 16-194 |
| Cow position: | chr18:51212067-51212249 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 138 |
| Conread position: | 16-286 |
| Cow position: | chr18:4535129-4534867 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 117, 43 |
| Conread position: | 16-297 |
| Cow position: | chr18:51178830-51178562 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 175, 41 |
| Conread position: | 18-182 |
| Cow position: | chr18:43797065-43796901 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-212 |
| Cow position: | chr18:11684869-11685066 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 18-229 |
| Cow position: | chr18:11313050-11312835 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 133 |
| Conread position: | 19-206 |
| Cow position: | chr18:56165873-56166058 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 39, 51 |
| Conread position: | 22-219 |
| Cow position: | chr18:7076849-7077047 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 23-194 |
| Cow position: | chr18:11790815-11790987 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 36, 115 |
| Conread position: | 24-180 |
| Cow position: | chr18:28930745-28930584 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 24-202 |
| Cow position: | chr18:30794321-30794500 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 24-240 |
| Cow position: | chr18:35367292-35367081 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 148, 35 |
| Conread position: | 25-216 |
| Cow position: | chr18:49324528-49324347 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 178, 40 |
| Conread position: | 25-230 |
| Cow position: | chr18:49015023-49015229 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 8 |
| Conread position: | 26-237 |
| Cow position: | chr18:25598345-25598115 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 26-296 |
| Cow position: | chr18:34220025-34219756 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 135, 182 |
| Conread position: | 27-296 |
| Cow position: | chr18:53038724-53038999 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 205 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 23, 186 |
| Conread position: | 30-282 |
| Cow position: | chr18:15880947-15880688 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 186 |
| Conread position: | 33-165 |
| Cow position: | chr18:17660654-17660523 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 33-202 |
| Cow position: | chr18:22569164-22568992 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 33-240 |
| Cow position: | chr18:8949890-8949676 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 34-240 |
| Cow position: | chr18:32189607-32189393 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 37-240 |
| Cow position: | chr18:4884612-4884398 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 110 |
| Conread position: | 40-283 |
| Cow position: | chr18:9176811-9177065 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 81 |
| Conread position: | 53-168 |
| Cow position: | chr18:11811877-11811988 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 54-296 |
| Cow position: | chr18:18699068-18699314 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 128, 17 |
| Conread position: | 59-219 |
| Cow position: | chr18:31082416-31082254 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 136, 10 |
| Conread position: | 62-275 |
| Cow position: | chr18:52413899-52414102 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 136 |
| Conread position: | 65-223 |
| Cow position: | chr18:47548049-47547890 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 139, 112 |
| Conread position: | 67-203 |
| Cow position: | chr18:23505270-23505406 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 68-222 |
| Cow position: | chr18:49981499-49981345 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 68-277 |
| Cow position: | chr18:21081951-21081747 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 70-203 |
| Cow position: | chr18:44917699-44917832 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-293 |
| Cow position: | chr18:16378867-16379090 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 131, 170 |
| Conread position: | 80-240 |
| Cow position: | chr18:50632490-50632324 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 87-296 |
| Cow position: | chr18:11672002-11672203 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 203, 62 |
Show alignments to all cow chromosomes.