Cow genome map

Conread name: Ss1.1-Lng1-LNG010041H06.5

Conread position: 1-161
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 159

Conread position: 1-182
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-194
Cow position:
Alignm length: 196
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-194
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 17, 137

Conread position: 1-194
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 45

Conread position: 1-202
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 15, 48

Conread position: 1-203
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 15, 136

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 165
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 15, 60

Conread position: 1-206
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 82

Conread position: 1-208
Cow position:
Alignm length: 214
Alignm identity: 149
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 129

Conread position: 1-240
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 8, 133

Conread position: 1-240
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 1-240
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 60

Conread position: 1-252
Cow position:
Alignm length: 264
Alignm identity: 196
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 15, 34

Conread position: 1-296
Cow position:
Alignm length: 302
Alignm identity: 218
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 15, 198

Conread position: 1-296
Cow position:
Alignm length: 299
Alignm identity: 222
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 15, 65

Conread position: 1-296
Cow position:
Alignm length: 302
Alignm identity: 216
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 9, 178

Conread position: 2-143
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 2-194
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 73

Conread position: 2-202
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 8, 62

Conread position: 2-202
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 2-203
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 155

Conread position: 2-213
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 14, 32

Conread position: 2-232
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 15, 0

Conread position: 2-235
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 32

Conread position: 2-236
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 14, 99

Conread position: 2-240
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 31

Conread position: 2-240
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 16, 148

Conread position: 2-240
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 2-293
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 14, 71

Conread position: 2-297
Cow position:
Alignm length: 299
Alignm identity: 201
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 14, 51

Conread position: 5-168
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 60, 131

Conread position: 5-182
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 5-182
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 5-196
Cow position:
Alignm length: 194
Alignm identity: 150
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 62

Conread position: 5-236
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 48

Conread position: 5-240
Cow position:
Alignm length: 249
Alignm identity: 179
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 11, 116

Conread position: 6-193
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 82

Conread position: 6-194
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 73

Conread position: 6-201
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 50, 195

Conread position: 6-202
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 65

Conread position: 6-202
Cow position:
Alignm length: 202
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 155

Conread position: 6-210
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 28

Conread position: 6-218
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 6-232
Cow position:
Alignm length: 229
Alignm identity: 175
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 10, 48

Conread position: 6-240
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 118

Conread position: 6-296
Cow position:
Alignm length: 299
Alignm identity: 198
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 24

Conread position: 6-296
Cow position:
Alignm length: 300
Alignm identity: 201
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 145

Conread position: 7-161
Cow position:
Alignm length: 161
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 112

Conread position: 9-141
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 23

Conread position: 9-188
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 167

Conread position: 9-237
Cow position:
Alignm length: 242
Alignm identity: 184
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 7, 0

Conread position: 9-292
Cow position:
Alignm length: 294
Alignm identity: 190
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 20

Conread position: 10-150
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 40

Conread position: 10-293
Cow position:
Alignm length: 296
Alignm identity: 191
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 11-163
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 11-218
Cow position:
Alignm length: 213
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 107

Conread position: 11-240
Cow position:
Alignm length: 246
Alignm identity: 185
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 135

Conread position: 12-240
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 47, 0

Conread position: 13-182
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 113

Conread position: 14-153
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 14-176
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 14-182
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 61, 27

Conread position: 14-182
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 14-192
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 64, 160

Conread position: 14-194
Cow position:
Alignm length: 182
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 97, 83

Conread position: 14-194
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 7

Conread position: 14-194
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 135

Conread position: 14-194
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 14-198
Cow position:
Alignm length: 186
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 14-200
Cow position:
Alignm length: 188
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 14-202
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 50, 121

Conread position: 14-202
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 53, 42

Conread position: 14-203
Cow position:
Alignm length: 192
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 15, 118

Conread position: 14-203
Cow position:
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 77

Conread position: 14-218
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 50, 145

Conread position: 14-219
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 45, 27

Conread position: 14-230
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 59

Conread position: 14-235
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 14-236
Cow position:
Alignm length: 232
Alignm identity: 174
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 54, 0

Conread position: 14-237
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 29

Conread position: 14-240
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 123

Conread position: 14-240
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 14-240
Cow position:
Alignm length: 227
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 14-241
Cow position:
Alignm length: 242
Alignm identity: 185
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 25, 121

Conread position: 14-274
Cow position:
Alignm length: 265
Alignm identity: 176
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 54, 150

Conread position: 14-286
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 14-287
Cow position:
Alignm length: 280
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 169

Conread position: 14-292
Cow position:
Alignm length: 288
Alignm identity: 202
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 49, 75

Conread position: 14-296
Cow position:
Alignm length: 286
Alignm identity: 188
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 34

Conread position: 14-296
Cow position:
Alignm length: 293
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 87

Conread position: 14-296
Cow position:
Alignm length: 284
Alignm identity: 193
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 276, 43

Conread position: 14-312
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 124

Conread position: 15-194
Cow position:
Alignm length: 183
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 14

Conread position: 15-194
Cow position:
Alignm length: 181
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 16-210
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 123

Conread position: 17-182
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 24-219
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 32, 21

Conread position: 25-240
Cow position:
Alignm length: 225
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 89

Conread position: 28-147
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 28-170
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 29-179
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 50, 30

Conread position: 33-202
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 33-203
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 105

Conread position: 37-182
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 6

Conread position: 38-240
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 150, 31

Conread position: 45-203
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 45-241
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 14

Conread position: 61-194
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 62-236
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 142, 0

Conread position: 62-237
Cow position:
Alignm length: 180
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 142, 0

Conread position: 68-194
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 10

Show alignments to all cow chromosomes.