Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010041H06.5 |
| Conread position: | 1-143 |
| Cow position: | chr21:23192548-23192397 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-161 |
| Cow position: | chr21:13488488-13488657 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-182 |
| Cow position: | chr21:33982840-33982659 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 136 |
| Conread position: | 1-188 |
| Cow position: | chr21:45262846-45262651 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 34 |
| Conread position: | 1-205 |
| Cow position: | chr21:37299430-37299636 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 75, 17 |
| Conread position: | 1-207 |
| Cow position: | chr21:45915742-45915542 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-235 |
| Cow position: | chr21:44214090-44214324 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 141 |
| Conread position: | 1-240 |
| Cow position: | chr21:30222310-30222560 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-283 |
| Cow position: | chr21:29214189-29213922 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 214 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 1-293 |
| Cow position: | chr21:46264138-46264435 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 1-296 |
| Cow position: | chr21:29014594-29014290 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 57, 244 |
| Conread position: | 2-125 |
| Cow position: | chr21:18041881-18041753 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-170 |
| Cow position: | chr21:22465164-22465330 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 2-170 |
| Cow position: | chr21:36297457-36297632 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 2-182 |
| Cow position: | chr21:82046-82218 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 2-191 |
| Cow position: | chr21:35899811-35900001 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 2-194 |
| Cow position: | chr21:28626207-28626400 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 108 |
| Conread position: | 2-194 |
| Cow position: | chr21:42135653-42135453 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-202 |
| Cow position: | chr21:11740154-11739949 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 14, 159 |
| Conread position: | 2-202 |
| Cow position: | chr21:27229827-27229624 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 138 |
| Conread position: | 2-202 |
| Cow position: | chr21:27624676-27624869 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 54 |
| Conread position: | 2-202 |
| Cow position: | chr21:28190999-28191203 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 117 |
| Conread position: | 2-202 |
| Cow position: | chr21:29484946-29485149 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 14, 139 |
| Conread position: | 2-203 |
| Cow position: | chr21:16569868-16570071 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 174 |
| Conread position: | 2-205 |
| Cow position: | chr21:38121068-38121275 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 2-212 |
| Cow position: | chr21:297720-297935 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 2-215 |
| Cow position: | chr21:2679523-2679731 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 2-219 |
| Cow position: | chr21:34654043-34654261 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 2-236 |
| Cow position: | chr21:32559392-32559158 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 192, 78 |
| Conread position: | 2-237 |
| Cow position: | chr21:641553-641799 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-237 |
| Cow position: | chr21:20262366-20262129 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 2-240 |
| Cow position: | chr21:10561617-10561367 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-240 |
| Cow position: | chr21:22860966-22861210 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 14, 159 |
| Conread position: | 2-240 |
| Cow position: | chr21:31691449-31691691 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 13, 138 |
| Conread position: | 2-277 |
| Cow position: | chr21:41522440-41522181 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 14, 59 |
| Conread position: | 2-293 |
| Cow position: | chr21:36795567-36795868 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-296 |
| Cow position: | chr21:13365305-13365612 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 127 |
| Conread position: | 2-296 |
| Cow position: | chr21:22014154-22014438 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 2-296 |
| Cow position: | chr21:24858282-24858563 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 198 |
| Conread position: | 2-296 |
| Cow position: | chr21:27569196-27568912 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 30 |
| Conread position: | 2-296 |
| Cow position: | chr21:29002191-29001899 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 179 |
| Conread position: | 3-240 |
| Cow position: | chr21:28030256-28030501 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 3-240 |
| Cow position: | chr21:28211165-28211394 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 54 |
| Conread position: | 3-296 |
| Cow position: | chr21:42841633-42841338 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 5, 200 |
| Conread position: | 5-170 |
| Cow position: | chr21:724916-724746 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 17, 131 |
| Conread position: | 5-170 |
| Cow position: | chr21:11645000-11644827 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 5-182 |
| Cow position: | chr21:20192867-20193045 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 11, 133 |
| Conread position: | 5-194 |
| Cow position: | chr21:395840-396030 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 11, 117 |
| Conread position: | 5-218 |
| Cow position: | chr21:4280702-4280488 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 132 |
| Conread position: | 5-293 |
| Cow position: | chr21:45835432-45835146 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 169 |
| Conread position: | 5-296 |
| Cow position: | chr21:20260351-20260050 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 185 |
| Conread position: | 6-157 |
| Cow position: | chr21:17856513-17856670 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 6-181 |
| Cow position: | chr21:16187837-16187657 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 6-194 |
| Cow position: | chr21:20160649-20160839 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 6-194 |
| Cow position: | chr21:26244891-26245077 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 10, 28 |
| Conread position: | 6-194 |
| Cow position: | chr21:32339766-32339577 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 72 |
| Conread position: | 6-236 |
| Cow position: | chr21:12461999-12461756 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 6-240 |
| Cow position: | chr21:14126259-14126490 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 6-240 |
| Cow position: | chr21:28919553-28919313 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 181 |
| Conread position: | 6-240 |
| Cow position: | chr21:48234189-48233956 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 29 |
| Conread position: | 6-241 |
| Cow position: | chr21:8349299-8349544 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 135 |
| Conread position: | 6-296 |
| Cow position: | chr21:868954-868672 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 6-296 |
| Cow position: | chr21:47363767-47363477 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 198 |
| Conread position: | 7-154 |
| Cow position: | chr21:18845043-18844889 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 9-240 |
| Cow position: | chr21:742261-742492 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 58, 108 |
| Conread position: | 9-288 |
| Cow position: | chr21:42384486-42384774 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 175, 241 |
| Conread position: | 10-170 |
| Cow position: | chr21:44515240-44515403 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 10-198 |
| Cow position: | chr21:28442723-28442899 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 166, 22 |
| Conread position: | 11-165 |
| Cow position: | chr21:10601402-10601241 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 11-182 |
| Cow position: | chr21:25764610-25764786 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 12-194 |
| Cow position: | chr21:12723136-12723314 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 82, 70 |
| Conread position: | 12-240 |
| Cow position: | chr21:71563-71804 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 22, 165 |
| Conread position: | 14-141 |
| Cow position: | chr21:44733192-44733063 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 14-169 |
| Cow position: | chr21:8426427-8426584 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 14-170 |
| Cow position: | chr21:19363481-19363320 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 14-194 |
| Cow position: | chr21:12801771-12801584 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 14-194 |
| Cow position: | chr21:29978779-29978597 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 14-198 |
| Cow position: | chr21:42414120-42413930 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 14-198 |
| Cow position: | chr21:42540241-42540055 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 14-202 |
| Cow position: | chr21:9990491-9990681 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 14-202 |
| Cow position: | chr21:33350721-33350912 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 74 |
| Conread position: | 14-202 |
| Cow position: | chr21:37479934-37480136 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 14-202 |
| Cow position: | chr21:45906640-45906452 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 53, 81 |
| Conread position: | 14-202 |
| Cow position: | chr21:47465140-47464948 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 147 |
| Conread position: | 14-216 |
| Cow position: | chr21:11360020-11360223 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 14-218 |
| Cow position: | chr21:41590585-41590376 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 62, 35 |
| Conread position: | 14-219 |
| Cow position: | chr21:7581925-7581715 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 59 |
| Conread position: | 14-236 |
| Cow position: | chr21:7673101-7673327 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 61, 125 |
| Conread position: | 14-240 |
| Cow position: | chr21:4399784-4400011 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 14-240 |
| Cow position: | chr21:19258805-19259034 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 188, 116 |
| Conread position: | 14-240 |
| Cow position: | chr21:47719324-47719086 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 14-288 |
| Cow position: | chr21:30250215-30249939 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 171, 44 |
| Conread position: | 14-293 |
| Cow position: | chr21:33702-33977 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 162, 158 |
| Conread position: | 14-296 |
| Cow position: | chr21:5392559-5392258 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 25, 247 |
| Conread position: | 14-296 |
| Cow position: | chr21:29069348-29069076 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 50, 187 |
| Conread position: | 14-296 |
| Cow position: | chr21:30835344-30835613 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 56, 103 |
| Conread position: | 14-296 |
| Cow position: | chr21:44825910-44825628 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 62, 189 |
| Conread position: | 15-183 |
| Cow position: | chr21:47160199-47160370 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 30 |
| Conread position: | 16-240 |
| Cow position: | chr21:829227-828992 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 48, 10 |
| Conread position: | 18-206 |
| Cow position: | chr21:13036915-13036731 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 46, 52 |
| Conread position: | 19-240 |
| Cow position: | chr21:802321-802106 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 185, 38 |
| Conread position: | 24-222 |
| Cow position: | chr21:674675-674876 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 44, 166 |
| Conread position: | 24-237 |
| Cow position: | chr21:21615765-21615994 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 32, 170 |
| Conread position: | 24-296 |
| Cow position: | chr21:30980587-30980312 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 49, 113 |
| Conread position: | 25-202 |
| Cow position: | chr21:41046796-41046977 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 104 |
| Conread position: | 25-237 |
| Cow position: | chr21:7169677-7169902 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 26-170 |
| Cow position: | chr21:11057882-11057742 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 26-193 |
| Cow position: | chr21:20183064-20183233 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 30-182 |
| Cow position: | chr21:19240880-19240722 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 33-202 |
| Cow position: | chr21:643324-643495 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 33-212 |
| Cow position: | chr21:46599359-46599538 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 32, 142 |
| Conread position: | 34-219 |
| Cow position: | chr21:35437478-35437299 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 160, 36 |
| Conread position: | 34-236 |
| Cow position: | chr21:24598656-24598860 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 29, 106 |
| Conread position: | 34-296 |
| Cow position: | chr21:7394284-7394024 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 101 |
| Conread position: | 36-182 |
| Cow position: | chr21:12104367-12104517 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 43-194 |
| Cow position: | chr21:19360167-19360013 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 44-203 |
| Cow position: | chr21:36682332-36682497 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 44-242 |
| Cow position: | chr21:19868946-19868742 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 25, 45 |
| Conread position: | 56-236 |
| Cow position: | chr21:6851197-6851379 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 57-240 |
| Cow position: | chr21:20163734-20163926 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 8, 15 |
| Conread position: | 58-240 |
| Cow position: | chr21:22850949-22851133 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 126, 28 |
| Conread position: | 59-262 |
| Cow position: | chr21:17252950-17252737 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 146, 65 |
| Conread position: | 62-203 |
| Cow position: | chr21:46451921-46451782 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 67-242 |
| Cow position: | chr21:39393784-39393968 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 74-218 |
| Cow position: | chr21:5342051-5341907 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.