Cow genome map

Conread name: Ss1.1-Lng1-LNG010041H06.5

Conread position: 1-143
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 1-161
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 1-182
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 136

Conread position: 1-188
Cow position:
Alignm length: 198
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 34

Conread position: 1-205
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 75, 17

Conread position: 1-207
Cow position:
Alignm length: 207
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-235
Cow position:
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 141

Conread position: 1-240
Cow position:
Alignm length: 251
Alignm identity: 183
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 1-283
Cow position:
Alignm length: 285
Alignm identity: 214
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 56, 22

Conread position: 1-293
Cow position:
Alignm length: 302
Alignm identity: 212
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 15, 23

Conread position: 1-296
Cow position:
Alignm length: 307
Alignm identity: 210
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 57, 244

Conread position: 2-125
Cow position:
Alignm length: 129
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 2-170
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 37

Conread position: 2-170
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 2-182
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 14, 59

Conread position: 2-191
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 132

Conread position: 2-194
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 108

Conread position: 2-194
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 2-202
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 159

Conread position: 2-202
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 138

Conread position: 2-202
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 54

Conread position: 2-202
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 117

Conread position: 2-202
Cow position:
Alignm length: 208
Alignm identity: 156
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 14, 139

Conread position: 2-203
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 174

Conread position: 2-205
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 2-212
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 16, 0

Conread position: 2-215
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 42

Conread position: 2-219
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 14, 38

Conread position: 2-236
Cow position:
Alignm length: 237
Alignm identity: 174
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 192, 78

Conread position: 2-237
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 2-237
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 92

Conread position: 2-240
Cow position:
Alignm length: 251
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 2-240
Cow position:
Alignm length: 247
Alignm identity: 179
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 159

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 170
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 13, 138

Conread position: 2-277
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 59

Conread position: 2-293
Cow position:
Alignm length: 302
Alignm identity: 194
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 2-296
Cow position:
Alignm length: 311
Alignm identity: 211
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 127

Conread position: 2-296
Cow position:
Alignm length: 305
Alignm identity: 215
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 14, 45

Conread position: 2-296
Cow position:
Alignm length: 300
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 198

Conread position: 2-296
Cow position:
Alignm length: 300
Alignm identity: 209
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 30

Conread position: 2-296
Cow position:
Alignm length: 306
Alignm identity: 208
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 179

Conread position: 3-240
Cow position:
Alignm length: 248
Alignm identity: 175
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 19, 141

Conread position: 3-240
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 54

Conread position: 3-296
Cow position:
Alignm length: 303
Alignm identity: 206
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 5, 200

Conread position: 5-170
Cow position:
Alignm length: 172
Alignm identity: 138
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 17, 131

Conread position: 5-170
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 5-182
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 11, 133

Conread position: 5-194
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 11, 117

Conread position: 5-218
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 132

Conread position: 5-293
Cow position:
Alignm length: 295
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 169

Conread position: 5-296
Cow position:
Alignm length: 305
Alignm identity: 213
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 185

Conread position: 6-157
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 6-181
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 30

Conread position: 6-194
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 6-194
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 28

Conread position: 6-194
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 72

Conread position: 6-236
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 6-240
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 61

Conread position: 6-240
Cow position:
Alignm length: 245
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 181

Conread position: 6-240
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 29

Conread position: 6-241
Cow position:
Alignm length: 249
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 135

Conread position: 6-296
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 10, 42

Conread position: 6-296
Cow position:
Alignm length: 300
Alignm identity: 202
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 198

Conread position: 7-154
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 9-240
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 58, 108

Conread position: 9-288
Cow position:
Alignm length: 291
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 175, 241

Conread position: 10-170
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 10-198
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 166, 22

Conread position: 11-165
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 46, 17

Conread position: 11-182
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 11, 36

Conread position: 12-194
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 82, 70

Conread position: 12-240
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 22, 165

Conread position: 14-141
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 14-169
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 14-170
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 14-194
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 14-194
Cow position:
Alignm length: 183
Alignm identity: 127
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 14-198
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 14-198
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 49, 19

Conread position: 14-202
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 75

Conread position: 14-202
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 74

Conread position: 14-202
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 14-202
Cow position:
Alignm length: 191
Alignm identity: 133
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 53, 81

Conread position: 14-202
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 147

Conread position: 14-216
Cow position:
Alignm length: 207
Alignm identity: 141
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 18

Conread position: 14-218
Cow position:
Alignm length: 211
Alignm identity: 145
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 35

Conread position: 14-219
Cow position:
Alignm length: 212
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 59

Conread position: 14-236
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 61, 125

Conread position: 14-240
Cow position:
Alignm length: 230
Alignm identity: 153
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 49, 82

Conread position: 14-240
Cow position:
Alignm length: 234
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 188, 116

Conread position: 14-240
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 19

Conread position: 14-288
Cow position:
Alignm length: 283
Alignm identity: 199
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 171, 44

Conread position: 14-293
Cow position:
Alignm length: 282
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 162, 158

Conread position: 14-296
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 247

Conread position: 14-296
Cow position:
Alignm length: 289
Alignm identity: 211
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 50, 187

Conread position: 14-296
Cow position:
Alignm length: 289
Alignm identity: 194
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 103

Conread position: 14-296
Cow position:
Alignm length: 291
Alignm identity: 200
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 62, 189

Conread position: 15-183
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 30

Conread position: 16-240
Cow position:
Alignm length: 240
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 10

Conread position: 18-206
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 46, 52

Conread position: 19-240
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 185, 38

Conread position: 24-222
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 44, 166

Conread position: 24-237
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 170

Conread position: 24-296
Cow position:
Alignm length: 278
Alignm identity: 194
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 49, 113

Conread position: 25-202
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 104

Conread position: 25-237
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 26-170
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 26-193
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 30-182
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 33-202
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 22, 54

Conread position: 33-212
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 32, 142

Conread position: 34-219
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 160, 36

Conread position: 34-236
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 29, 106

Conread position: 34-296
Cow position:
Alignm length: 268
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 101

Conread position: 36-182
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 43-194
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 44-203
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 44-242
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 25, 45

Conread position: 56-236
Cow position:
Alignm length: 183
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 156, 0

Conread position: 57-240
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 8, 15

Conread position: 58-240
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 126, 28

Conread position: 59-262
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 146, 65

Conread position: 62-203
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 67-242
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 114, 0

Conread position: 74-218
Cow position:
Alignm length: 145
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.