Cow genome map

Conread name: Ss1.1-Lng1-LNG010041H06.5

Conread position: 1-167
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 1-194
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 1-202
Cow position:
Alignm length: 209
Alignm identity: 159
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 15, 0

Conread position: 1-202
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 35

Conread position: 1-202
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 71

Conread position: 1-237
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 15, 105

Conread position: 1-240
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 15, 118

Conread position: 1-240
Cow position:
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 1-244
Cow position:
Alignm length: 253
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 135

Conread position: 1-245
Cow position:
Alignm length: 260
Alignm identity: 190
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 15, 169

Conread position: 1-293
Cow position:
Alignm length: 301
Alignm identity: 208
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 66, 90

Conread position: 2-131
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 2-170
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 14, 69

Conread position: 2-182
Cow position:
Alignm length: 188
Alignm identity: 154
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 29

Conread position: 2-182
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 142

Conread position: 2-194
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 109

Conread position: 2-194
Cow position:
Alignm length: 198
Alignm identity: 150
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 14, 175

Conread position: 2-202
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 2-202
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 2-202
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 34

Conread position: 2-218
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 137

Conread position: 2-235
Cow position:
Alignm length: 246
Alignm identity: 181
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 2-240
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 11, 202

Conread position: 2-283
Cow position:
Alignm length: 303
Alignm identity: 211
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 2-288
Cow position:
Alignm length: 298
Alignm identity: 203
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 51

Conread position: 2-296
Cow position:
Alignm length: 298
Alignm identity: 202
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 64

Conread position: 4-202
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 160

Conread position: 5-182
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 11, 70

Conread position: 5-195
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 41

Conread position: 5-202
Cow position:
Alignm length: 204
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 5-203
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 48

Conread position: 5-212
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 13, 28

Conread position: 5-233
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 62, 124

Conread position: 5-240
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 16, 128

Conread position: 5-288
Cow position:
Alignm length: 288
Alignm identity: 213
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 56, 195

Conread position: 6-170
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 37

Conread position: 6-187
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 59

Conread position: 6-202
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 124, 59

Conread position: 6-235
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 188, 26

Conread position: 6-237
Cow position:
Alignm length: 234
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 55

Conread position: 6-238
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 186

Conread position: 6-292
Cow position:
Alignm length: 296
Alignm identity: 197
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 10, 146

Conread position: 6-296
Cow position:
Alignm length: 305
Alignm identity: 208
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 26

Conread position: 6-296
Cow position:
Alignm length: 294
Alignm identity: 194
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 10, 59

Conread position: 6-296
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 162, 37

Conread position: 6-296
Cow position:
Alignm length: 300
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 222

Conread position: 7-236
Cow position:
Alignm length: 239
Alignm identity: 169
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 9, 58

Conread position: 7-296
Cow position:
Alignm length: 299
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 154

Conread position: 9-158
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 128

Conread position: 9-237
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 68

Conread position: 9-296
Cow position:
Alignm length: 292
Alignm identity: 206
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 17

Conread position: 10-164
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 11

Conread position: 10-293
Cow position:
Alignm length: 290
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 56

Conread position: 10-298
Cow position:
Alignm length: 296
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 166, 282

Conread position: 11-240
Cow position:
Alignm length: 234
Alignm identity: 169
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 54, 77

Conread position: 11-292
Cow position:
Alignm length: 289
Alignm identity: 189
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 107

Conread position: 11-296
Cow position:
Alignm length: 297
Alignm identity: 190
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 223

Conread position: 14-125
Cow position:
Alignm length: 117
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 14-140
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 14-164
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 125

Conread position: 14-165
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 14-190
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 171

Conread position: 14-194
Cow position:
Alignm length: 182
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 44

Conread position: 14-194
Cow position:
Alignm length: 182
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 14-194
Cow position:
Alignm length: 182
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 14-196
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 14-200
Cow position:
Alignm length: 190
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 169

Conread position: 14-202
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 14-202
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 14-212
Cow position:
Alignm length: 199
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 14-218
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 14-218
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 77

Conread position: 14-234
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 14

Conread position: 14-237
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 14-237
Cow position:
Alignm length: 234
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 14-240
Cow position:
Alignm length: 228
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 133, 49

Conread position: 14-240
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 54, 33

Conread position: 14-240
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 44

Conread position: 14-240
Cow position:
Alignm length: 232
Alignm identity: 174
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 179, 42

Conread position: 14-241
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 170, 51

Conread position: 14-241
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 93

Conread position: 14-277
Cow position:
Alignm length: 278
Alignm identity: 194
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 44, 111

Conread position: 14-293
Cow position:
Alignm length: 285
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 9

Conread position: 14-296
Cow position:
Alignm length: 284
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 276, 55

Conread position: 14-296
Cow position:
Alignm length: 297
Alignm identity: 198
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 49

Conread position: 14-296
Cow position:
Alignm length: 300
Alignm identity: 213
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 104, 16

Conread position: 15-150
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 99

Conread position: 15-182
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 116

Conread position: 15-293
Cow position:
Alignm length: 284
Alignm identity: 195
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 97, 42

Conread position: 16-194
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 123

Conread position: 16-219
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 17

Conread position: 16-240
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 212

Conread position: 17-180
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 114

Conread position: 18-202
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 18-203
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 21-222
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 21-302
Cow position:
Alignm length: 288
Alignm identity: 190
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 213

Conread position: 23-296
Cow position:
Alignm length: 280
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 135

Conread position: 24-182
Cow position:
Alignm length: 164
Alignm identity: 130
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 41, 111

Conread position: 24-203
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 72

Conread position: 24-237
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 176

Conread position: 24-240
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 170, 41

Conread position: 25-205
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 25-240
Cow position:
Alignm length: 227
Alignm identity: 154
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 26-201
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 162

Conread position: 26-202
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 112

Conread position: 26-240
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 26-252
Cow position:
Alignm length: 235
Alignm identity: 174
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 156, 36

Conread position: 27-202
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 27-202
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 37

Conread position: 28-240
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 156, 42

Conread position: 28-293
Cow position:
Alignm length: 273
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 109

Conread position: 30-306
Cow position:
Alignm length: 286
Alignm identity: 188
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 108

Conread position: 31-203
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 34

Conread position: 33-165
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 33-202
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 33-237
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 142

Conread position: 45-202
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 91

Conread position: 53-181
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 54-200
Cow position:
Alignm length: 147
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 55-202
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 58-296
Cow position:
Alignm length: 242
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 184, 178

Conread position: 59-296
Cow position:
Alignm length: 247
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 12

Conread position: 62-296
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 174, 7

Conread position: 62-296
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 228, 12

Conread position: 62-296
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 226, 54

Conread position: 64-218
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 128, 70

Conread position: 67-240
Cow position:
Alignm length: 175
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 70-203
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 71-219
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 74-296
Cow position:
Alignm length: 224
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 214, 128

Conread position: 80-237
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 135

Conread position: 80-320
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 124, 168

Conread position: 88-306
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 0

Show alignments to all cow chromosomes.