Cow genome map

Conread name: Ss1.1-Lng1-LNG010041H06.5

Conread position: 1-142
Cow position:
Alignm length: 145
Alignm identity: 118
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 15, 64

Conread position: 1-204
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 1-235
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 193, 64

Conread position: 1-240
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 19, 80

Conread position: 1-240
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 12, 160

Conread position: 1-240
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 227

Conread position: 1-292
Cow position:
Alignm length: 303
Alignm identity: 214
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 15, 122

Conread position: 2-156
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 2-164
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 2-165
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 123

Conread position: 2-194
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 30

Conread position: 2-194
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 16, 33

Conread position: 2-202
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 45

Conread position: 2-202
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 44

Conread position: 2-204
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 49

Conread position: 2-204
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 184

Conread position: 2-236
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 56, 16

Conread position: 2-237
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 173
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 16, 67

Conread position: 2-240
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 16

Conread position: 2-240
Cow position:
Alignm length: 248
Alignm identity: 175
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 14, 57

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 180, 16

Conread position: 2-293
Cow position:
Alignm length: 302
Alignm identity: 215
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 2-339
Cow position:
Alignm length: 352
Alignm identity: 234
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 14, 32

Conread position: 4-195
Cow position:
Alignm length: 195
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 57

Conread position: 5-194
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 5-202
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 5-203
Cow position:
Alignm length: 199
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 5-222
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 5-235
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 0

Conread position: 5-237
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 11, 213

Conread position: 5-239
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 11, 225

Conread position: 5-296
Cow position:
Alignm length: 298
Alignm identity: 211
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 71, 142

Conread position: 6-161
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 86

Conread position: 6-161
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 6-192
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 32

Conread position: 6-194
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 29

Conread position: 6-194
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 42

Conread position: 6-194
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 128

Conread position: 6-203
Cow position:
Alignm length: 201
Alignm identity: 137
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 82

Conread position: 6-236
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 114

Conread position: 6-237
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 10, 171

Conread position: 6-237
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 6-238
Cow position:
Alignm length: 238
Alignm identity: 159
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 10, 67

Conread position: 6-240
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 136

Conread position: 6-240
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 105, 52

Conread position: 6-240
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 222

Conread position: 6-296
Cow position:
Alignm length: 299
Alignm identity: 207
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 10, 147

Conread position: 7-152
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 7-240
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 11, 32

Conread position: 9-202
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 148

Conread position: 9-240
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 120

Conread position: 10-272
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 73, 13

Conread position: 10-296
Cow position:
Alignm length: 293
Alignm identity: 196
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 184, 236

Conread position: 10-296
Cow position:
Alignm length: 301
Alignm identity: 199
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 24

Conread position: 12-262
Cow position:
Alignm length: 257
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 6, 53

Conread position: 12-296
Cow position:
Alignm length: 289
Alignm identity: 194
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 195, 24

Conread position: 14-153
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 124

Conread position: 14-168
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 14-169
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 14-194
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 101, 95

Conread position: 14-194
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 61, 121

Conread position: 14-201
Cow position:
Alignm length: 189
Alignm identity: 130
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 14-202
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 51, 27

Conread position: 14-202
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 12

Conread position: 14-203
Cow position:
Alignm length: 194
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 10

Conread position: 14-203
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 25

Conread position: 14-205
Cow position:
Alignm length: 192
Alignm identity: 152
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 0

Conread position: 14-217
Cow position:
Alignm length: 210
Alignm identity: 144
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 14-222
Cow position:
Alignm length: 211
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 190, 48

Conread position: 14-224
Cow position:
Alignm length: 211
Alignm identity: 145
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 14-236
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 181, 31

Conread position: 14-237
Cow position:
Alignm length: 227
Alignm identity: 174
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 190, 45

Conread position: 14-237
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 181

Conread position: 14-238
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 185

Conread position: 14-240
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 18

Conread position: 14-240
Cow position:
Alignm length: 246
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 128

Conread position: 14-240
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 119

Conread position: 14-243
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 19

Conread position: 15-201
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 48, 17

Conread position: 16-218
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 28

Conread position: 17-194
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 40

Conread position: 17-202
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 13

Conread position: 17-240
Cow position:
Alignm length: 239
Alignm identity: 172
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 18-170
Cow position:
Alignm length: 159
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 19-240
Cow position:
Alignm length: 224
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 113

Conread position: 22-240
Cow position:
Alignm length: 225
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 14

Conread position: 22-296
Cow position:
Alignm length: 283
Alignm identity: 203
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 197

Conread position: 23-237
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 24-240
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 44, 146

Conread position: 24-269
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 7

Conread position: 25-237
Cow position:
Alignm length: 221
Alignm identity: 174
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 52

Conread position: 27-205
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 30, 120

Conread position: 28-237
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 20

Conread position: 30-218
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 112

Conread position: 32-296
Cow position:
Alignm length: 269
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 82

Conread position: 33-219
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 161, 26

Conread position: 33-235
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 43, 19

Conread position: 33-236
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 132

Conread position: 35-240
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 159, 27

Conread position: 39-185
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 99

Conread position: 39-212
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 20, 97

Conread position: 51-218
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 23, 84

Conread position: 59-240
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 145, 9

Conread position: 59-240
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 139, 173

Conread position: 60-296
Cow position:
Alignm length: 250
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 20

Conread position: 62-235
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 5, 150

Conread position: 63-202
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 66-202
Cow position:
Alignm length: 137
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 74-240
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 76-240
Cow position:
Alignm length: 165
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 91-223
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 0

Show alignments to all cow chromosomes.