Cow genome map

Conread name: Ss1.1-Lng1-LNG010041H06.5

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 60

Conread position: 1-157
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 1-198
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 67, 96

Conread position: 1-201
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 7, 135

Conread position: 1-203
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 1-205
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 47

Conread position: 1-205
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 1-205
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 1-206
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 68, 31

Conread position: 1-237
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 207

Conread position: 1-240
Cow position:
Alignm length: 254
Alignm identity: 193
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 15, 0

Conread position: 1-240
Cow position:
Alignm length: 249
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 232

Conread position: 1-240
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 59, 17

Conread position: 2-159
Cow position:
Alignm length: 159
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 92, 60

Conread position: 2-161
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 2-164
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 71

Conread position: 2-168
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 29

Conread position: 2-181
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 58

Conread position: 2-194
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 14, 163

Conread position: 2-194
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 2-208
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 6, 0

Conread position: 2-218
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 104

Conread position: 2-226
Cow position:
Alignm length: 233
Alignm identity: 173
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 14, 33

Conread position: 2-237
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 45

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 62

Conread position: 2-240
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 97

Conread position: 2-292
Cow position:
Alignm length: 303
Alignm identity: 202
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 16, 229

Conread position: 2-296
Cow position:
Alignm length: 300
Alignm identity: 210
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 65, 198

Conread position: 3-118
Cow position:
Alignm length: 121
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 3-170
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 5, 23

Conread position: 3-202
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 3-222
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 3-286
Cow position:
Alignm length: 300
Alignm identity: 205
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 11

Conread position: 5-182
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 11

Conread position: 5-202
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 51

Conread position: 5-202
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 5-205
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 40

Conread position: 5-208
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 71, 88

Conread position: 5-232
Cow position:
Alignm length: 234
Alignm identity: 177
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 210

Conread position: 5-240
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 11, 0

Conread position: 5-240
Cow position:
Alignm length: 244
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 25

Conread position: 6-237
Cow position:
Alignm length: 237
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 101

Conread position: 6-240
Cow position:
Alignm length: 247
Alignm identity: 186
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 10, 0

Conread position: 7-240
Cow position:
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 9-165
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 24

Conread position: 9-202
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 126

Conread position: 9-202
Cow position:
Alignm length: 197
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 63, 23

Conread position: 9-232
Cow position:
Alignm length: 233
Alignm identity: 175
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 52, 23

Conread position: 9-240
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 115

Conread position: 10-205
Cow position:
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 10-240
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 60, 98

Conread position: 10-240
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 58, 206

Conread position: 11-240
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 209, 50

Conread position: 11-283
Cow position:
Alignm length: 273
Alignm identity: 201
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 48, 0

Conread position: 14-161
Cow position:
Alignm length: 148
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-165
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 104

Conread position: 14-170
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 14-182
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 14-182
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 129

Conread position: 14-193
Cow position:
Alignm length: 183
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 73

Conread position: 14-194
Cow position:
Alignm length: 184
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 79

Conread position: 14-194
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 14-194
Cow position:
Alignm length: 186
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 14-202
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 14-202
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 153

Conread position: 14-202
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 14-203
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 14-203
Cow position:
Alignm length: 191
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 77

Conread position: 14-204
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 14-205
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 55, 22

Conread position: 14-210
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 43

Conread position: 14-218
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 31

Conread position: 14-236
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 43, 145

Conread position: 14-240
Cow position:
Alignm length: 235
Alignm identity: 169
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 191, 18

Conread position: 14-240
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 49, 115

Conread position: 14-240
Cow position:
Alignm length: 237
Alignm identity: 160
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 62, 50

Conread position: 14-243
Cow position:
Alignm length: 234
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 14-283
Cow position:
Alignm length: 274
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 186

Conread position: 14-292
Cow position:
Alignm length: 285
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 187

Conread position: 14-293
Cow position:
Alignm length: 284
Alignm identity: 191
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 217

Conread position: 14-293
Cow position:
Alignm length: 287
Alignm identity: 196
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 80

Conread position: 14-296
Cow position:
Alignm length: 285
Alignm identity: 199
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 189, 45

Conread position: 14-297
Cow position:
Alignm length: 292
Alignm identity: 201
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 44, 12

Conread position: 15-128
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 15-194
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 47, 107

Conread position: 16-240
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 77, 16

Conread position: 18-182
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 45, 31

Conread position: 22-194
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 22-194
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 23-222
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 96

Conread position: 23-237
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 173, 0

Conread position: 24-296
Cow position:
Alignm length: 283
Alignm identity: 187
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 25-182
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 25-293
Cow position:
Alignm length: 274
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 128, 23

Conread position: 28-296
Cow position:
Alignm length: 274
Alignm identity: 192
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 210

Conread position: 32-202
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 33-196
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 33-219
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 26

Conread position: 33-240
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 33-293
Cow position:
Alignm length: 262
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 257, 12

Conread position: 34-194
Cow position:
Alignm length: 165
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 113

Conread position: 34-222
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 126

Conread position: 34-296
Cow position:
Alignm length: 279
Alignm identity: 188
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 104

Conread position: 37-309
Cow position:
Alignm length: 286
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 83

Conread position: 56-240
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 129

Conread position: 57-293
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 233, 150

Conread position: 59-202
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 59-240
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 125, 10

Conread position: 60-218
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 150, 0

Conread position: 66-236
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 73-240
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 131, 0

Conread position: 80-283
Cow position:
Alignm length: 204
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 148, 0

Show alignments to all cow chromosomes.