Cow genome map

Conread name: Ss1.1-Lng1-LNG010041H06.5

Conread position: 1-150
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 65

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 15, 35

Conread position: 1-176
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 58

Conread position: 1-182
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 1-194
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 161

Conread position: 1-194
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 73, 0

Conread position: 1-203
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 15, 108

Conread position: 1-205
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 9, 33

Conread position: 1-205
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 15, 115

Conread position: 1-218
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 15, 0

Conread position: 1-218
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 15, 31

Conread position: 1-235
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 14, 31

Conread position: 1-240
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 15, 202

Conread position: 1-240
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 1-240
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 31

Conread position: 1-296
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 15, 45

Conread position: 1-296
Cow position:
Alignm length: 301
Alignm identity: 206
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 57, 146

Conread position: 1-296
Cow position:
Alignm length: 310
Alignm identity: 208
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 15, 110

Conread position: 2-132
Cow position:
Alignm length: 135
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 88

Conread position: 2-194
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 195

Conread position: 2-194
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 92

Conread position: 2-194
Cow position:
Alignm length: 195
Alignm identity: 147
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 14, 69

Conread position: 2-199
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 32

Conread position: 2-202
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 2-203
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 2-218
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 41

Conread position: 2-237
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 14, 72

Conread position: 2-238
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 2-240
Cow position:
Alignm length: 251
Alignm identity: 189
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 14, 56

Conread position: 2-249
Cow position:
Alignm length: 255
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 33

Conread position: 2-296
Cow position:
Alignm length: 298
Alignm identity: 210
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 57, 30

Conread position: 2-296
Cow position:
Alignm length: 298
Alignm identity: 212
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 16, 62

Conread position: 3-205
Cow position:
Alignm length: 205
Alignm identity: 155
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 7, 68

Conread position: 4-219
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 79, 5

Conread position: 5-196
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 46

Conread position: 5-204
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 11, 111

Conread position: 5-205
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 28

Conread position: 5-237
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 59, 15

Conread position: 5-240
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 13

Conread position: 6-170
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 6-182
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 6-182
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 6-183
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 6-194
Cow position:
Alignm length: 191
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 59

Conread position: 6-194
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 6-194
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 66

Conread position: 6-202
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 57, 0

Conread position: 6-205
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 149

Conread position: 6-206
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 6-208
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 10, 195

Conread position: 6-240
Cow position:
Alignm length: 250
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 6-240
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 20

Conread position: 6-240
Cow position:
Alignm length: 240
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 195

Conread position: 6-296
Cow position:
Alignm length: 297
Alignm identity: 188
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 226

Conread position: 7-202
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 179

Conread position: 7-219
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 27, 54

Conread position: 9-351
Cow position:
Alignm length: 355
Alignm identity: 235
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 149

Conread position: 10-205
Cow position:
Alignm length: 198
Alignm identity: 154
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 74, 146

Conread position: 10-218
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 124

Conread position: 10-240
Cow position:
Alignm length: 239
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 119

Conread position: 12-202
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 94

Conread position: 12-240
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 54, 127

Conread position: 13-296
Cow position:
Alignm length: 292
Alignm identity: 193
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 14-152
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 49, 120

Conread position: 14-159
Cow position:
Alignm length: 149
Alignm identity: 120
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 14-170
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 57

Conread position: 14-182
Cow position:
Alignm length: 174
Alignm identity: 141
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 53, 20

Conread position: 14-182
Cow position:
Alignm length: 169
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 14-201
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 14-201
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 14-201
Cow position:
Alignm length: 191
Alignm identity: 147
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 14-202
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 51, 17

Conread position: 14-202
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 58, 26

Conread position: 14-202
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 44, 126

Conread position: 14-202
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 23

Conread position: 14-203
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 145

Conread position: 14-205
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 124

Conread position: 14-205
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 18

Conread position: 14-205
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 14-206
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 126

Conread position: 14-208
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 64, 124

Conread position: 14-216
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 31

Conread position: 14-219
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 14-237
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 100

Conread position: 14-239
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 126

Conread position: 14-240
Cow position:
Alignm length: 236
Alignm identity: 170
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 45, 102

Conread position: 14-240
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 188

Conread position: 14-240
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 170, 57

Conread position: 14-240
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 99

Conread position: 14-240
Cow position:
Alignm length: 233
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 16

Conread position: 14-287
Cow position:
Alignm length: 281
Alignm identity: 180
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 18

Conread position: 14-296
Cow position:
Alignm length: 286
Alignm identity: 188
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 159

Conread position: 14-296
Cow position:
Alignm length: 285
Alignm identity: 184
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 181

Conread position: 14-307
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 271, 22

Conread position: 15-182
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 15-235
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 192, 56

Conread position: 16-202
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 47

Conread position: 18-219
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 18-240
Cow position:
Alignm length: 229
Alignm identity: 169
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 43, 56

Conread position: 19-240
Cow position:
Alignm length: 226
Alignm identity: 164
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 52, 27

Conread position: 20-202
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 111

Conread position: 20-237
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 181

Conread position: 21-234
Cow position:
Alignm length: 216
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 152, 47

Conread position: 25-202
Cow position:
Alignm length: 179
Alignm identity: 139
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 39, 49

Conread position: 26-195
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 46

Conread position: 28-240
Cow position:
Alignm length: 216
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 0

Conread position: 29-202
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 121, 156

Conread position: 29-240
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 175, 30

Conread position: 30-203
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 29, 160

Conread position: 33-194
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 57

Conread position: 33-240
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 55

Conread position: 33-296
Cow position:
Alignm length: 274
Alignm identity: 179
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 102

Conread position: 37-203
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 37-203
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 40-206
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 155

Conread position: 52-182
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 58-219
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 146, 13

Conread position: 70-240
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 134, 0

Conread position: 71-236
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 60

Conread position: 74-243
Cow position:
Alignm length: 174
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 130, 0

Conread position: 81-235
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 84-296
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 204, 46

Show alignments to all cow chromosomes.