Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010041H06.5 |
| Conread position: | 1-161 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 12, 125 |
| Conread position: | 1-182 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-195 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-203 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 1-203 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 15, 115 |
| Conread position: | 1-203 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 1-217 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 64 |
| Conread position: | 1-237 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 1-240 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 59 |
| Conread position: | 1-277 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 63, 223 |
| Conread position: | 2-142 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-170 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 2-170 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 2-182 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-194 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 2-194 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-194 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 2-201 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 14, 183 |
| Conread position: | 2-202 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 2-202 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 2-205 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 14, 91 |
| Conread position: | 2-235 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 166 |
| Conread position: | 2-237 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 2-239 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 2-240 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 2-288 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 2-296 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 3-202 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 73, 15 |
| Conread position: | 3-240 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 20, 142 |
| Conread position: | 4-240 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 12, 75 |
| Conread position: | 5-165 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 5-169 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 5-203 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 5-230 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 5-237 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 68 |
| Conread position: | 5-240 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 5-304 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 11, 68 |
| Conread position: | 6-169 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 66 |
| Conread position: | 6-169 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 130 |
| Conread position: | 6-170 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 64, 12 |
| Conread position: | 6-186 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 77 |
| Conread position: | 6-194 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 10, 43 |
| Conread position: | 6-202 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 10, 131 |
| Conread position: | 6-235 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 10, 128 |
| Conread position: | 6-235 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 48, 172 |
| Conread position: | 6-236 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 7, 31 |
| Conread position: | 6-242 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 10, 221 |
| Conread position: | 6-292 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 104 |
| Conread position: | 6-296 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 139 |
| Conread position: | 9-183 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 7, 52 |
| Conread position: | 9-202 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 169 |
| Conread position: | 9-206 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 9-237 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 76, 200 |
| Conread position: | 9-240 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 125 |
| Conread position: | 9-240 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 71, 23 |
| Conread position: | 11-143 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 11-240 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 11-240 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 38, 135 |
| Conread position: | 11-240 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 48, 137 |
| Conread position: | 14-170 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 14-170 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 14-194 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 14-196 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 41, 120 |
| Conread position: | 14-202 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 178 |
| Conread position: | 14-202 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 14-202 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 42 |
| Conread position: | 14-203 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 77 |
| Conread position: | 14-203 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 45, 91 |
| Conread position: | 14-203 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 54, 65 |
| Conread position: | 14-219 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 14-237 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 45, 12 |
| Conread position: | 14-240 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 184, 67 |
| Conread position: | 14-247 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 162, 12 |
| Conread position: | 14-284 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 53, 216 |
| Conread position: | 14-298 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 45, 243 |
| Conread position: | 18-115 |
| Cow position: | |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 18-240 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 19-202 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 19-240 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 126 |
| Conread position: | 22-296 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 41, 217 |
| Conread position: | 23-288 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 36, 143 |
| Conread position: | 24-203 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 24-237 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 180, 45 |
| Conread position: | 25-240 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 25-296 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 265, 31 |
| Conread position: | 33-189 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 80, 26 |
| Conread position: | 33-202 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 28, 133 |
| Conread position: | 33-240 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 32, 130 |
| Conread position: | 34-321 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 136 |
| Conread position: | 35-202 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 38-164 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 41-293 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 89 |
| Conread position: | 45-296 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 16, 70 |
| Conread position: | 56-218 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 6 |
| Conread position: | 58-296 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 145, 162 |
| Conread position: | 64-203 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 102, 126 |
| Conread position: | 65-205 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-240 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 86-237 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 98, 48 |
Show alignments to all cow chromosomes.