Cow genome map

Conread name: Ss1.1-Lng1-LNG010041H06.5

Conread position: 1-112
Cow position:
Alignm length: 114
Alignm identity: 98
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 1-194
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 45

Conread position: 1-194
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 134

Conread position: 1-202
Cow position:
Alignm length: 204
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 1-202
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 15, 63

Conread position: 1-219
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 1-233
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 15, 112

Conread position: 1-240
Cow position:
Alignm length: 249
Alignm identity: 179
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 17, 147

Conread position: 1-240
Cow position:
Alignm length: 249
Alignm identity: 185
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 15, 70

Conread position: 1-240
Cow position:
Alignm length: 250
Alignm identity: 189
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 69, 0

Conread position: 1-240
Cow position:
Alignm length: 255
Alignm identity: 192
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 12, 48

Conread position: 1-240
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 6, 58

Conread position: 1-246
Cow position:
Alignm length: 254
Alignm identity: 191
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 19, 90

Conread position: 1-284
Cow position:
Alignm length: 290
Alignm identity: 196
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 115

Conread position: 1-295
Cow position:
Alignm length: 308
Alignm identity: 216
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 137

Conread position: 1-296
Cow position:
Alignm length: 303
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 47

Conread position: 2-166
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 2-169
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 56

Conread position: 2-170
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 2-182
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 38

Conread position: 2-183
Cow position:
Alignm length: 184
Alignm identity: 145
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 14, 69

Conread position: 2-193
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 39

Conread position: 2-194
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 146

Conread position: 2-196
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 51

Conread position: 2-202
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 59, 124

Conread position: 2-202
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 80

Conread position: 2-202
Cow position:
Alignm length: 207
Alignm identity: 157
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 2-203
Cow position:
Alignm length: 205
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 99

Conread position: 2-209
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 14, 138

Conread position: 2-237
Cow position:
Alignm length: 253
Alignm identity: 191
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 7

Conread position: 2-240
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 2-240
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 20

Conread position: 2-275
Cow position:
Alignm length: 282
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 242

Conread position: 2-278
Cow position:
Alignm length: 282
Alignm identity: 193
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 137

Conread position: 2-296
Cow position:
Alignm length: 308
Alignm identity: 209
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 253

Conread position: 2-302
Cow position:
Alignm length: 314
Alignm identity: 225
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 57, 134

Conread position: 3-296
Cow position:
Alignm length: 307
Alignm identity: 204
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 140

Conread position: 5-202
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 63

Conread position: 5-202
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 137

Conread position: 5-217
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 5-219
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 41

Conread position: 5-232
Cow position:
Alignm length: 237
Alignm identity: 163
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 77

Conread position: 5-237
Cow position:
Alignm length: 244
Alignm identity: 171
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 11, 62

Conread position: 5-292
Cow position:
Alignm length: 296
Alignm identity: 201
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 11, 138

Conread position: 5-296
Cow position:
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 12

Conread position: 6-165
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 81

Conread position: 6-182
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 26

Conread position: 6-194
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 6-194
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 6-194
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 137

Conread position: 6-194
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 67

Conread position: 6-196
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 75

Conread position: 6-196
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 6-203
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 133

Conread position: 6-203
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 27

Conread position: 6-218
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 22

Conread position: 6-237
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 212

Conread position: 6-237
Cow position:
Alignm length: 233
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 101

Conread position: 6-240
Cow position:
Alignm length: 244
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 128

Conread position: 6-243
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 10, 0

Conread position: 6-248
Cow position:
Alignm length: 250
Alignm identity: 177
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 10, 191

Conread position: 6-296
Cow position:
Alignm length: 301
Alignm identity: 204
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 52

Conread position: 7-218
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 9, 93

Conread position: 7-242
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 55, 203

Conread position: 9-203
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 9-204
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 182

Conread position: 9-205
Cow position:
Alignm length: 200
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 128

Conread position: 9-237
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 127

Conread position: 9-240
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 55

Conread position: 10-240
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 175

Conread position: 10-241
Cow position:
Alignm length: 237
Alignm identity: 155
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 11-170
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 64

Conread position: 11-240
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 12-194
Cow position:
Alignm length: 183
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 12-202
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 14-170
Cow position:
Alignm length: 160
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 14-170
Cow position:
Alignm length: 159
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 14-189
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 49, 174

Conread position: 14-192
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 13

Conread position: 14-194
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 57

Conread position: 14-198
Cow position:
Alignm length: 190
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 14-201
Cow position:
Alignm length: 189
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 20

Conread position: 14-201
Cow position:
Alignm length: 190
Alignm identity: 146
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 20, 9

Conread position: 14-202
Cow position:
Alignm length: 189
Alignm identity: 148
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 14-202
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 49

Conread position: 14-202
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 137, 116

Conread position: 14-202
Cow position:
Alignm length: 189
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 14-202
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 58, 29

Conread position: 14-202
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 14-218
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 14-218
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 14-219
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 14-219
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 48, 0

Conread position: 14-233
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 14-237
Cow position:
Alignm length: 230
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 140

Conread position: 14-240
Cow position:
Alignm length: 239
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 128

Conread position: 14-240
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 14-240
Cow position:
Alignm length: 230
Alignm identity: 176
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 43, 173

Conread position: 14-240
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 18

Conread position: 14-240
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 60, 18

Conread position: 14-241
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 149, 54

Conread position: 14-263
Cow position:
Alignm length: 259
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 100

Conread position: 14-296
Cow position:
Alignm length: 297
Alignm identity: 205
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 14

Conread position: 14-296
Cow position:
Alignm length: 284
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 276, 43

Conread position: 14-296
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 124

Conread position: 14-296
Cow position:
Alignm length: 285
Alignm identity: 190
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 56

Conread position: 14-296
Cow position:
Alignm length: 284
Alignm identity: 197
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 276, 62

Conread position: 14-304
Cow position:
Alignm length: 300
Alignm identity: 193
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 190

Conread position: 14-307
Cow position:
Alignm length: 305
Alignm identity: 221
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 42, 76

Conread position: 15-202
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 16-170
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 17-219
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 18-205
Cow position:
Alignm length: 189
Alignm identity: 129
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 155

Conread position: 21-296
Cow position:
Alignm length: 283
Alignm identity: 204
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 36, 113

Conread position: 22-182
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 22-218
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 182, 37

Conread position: 25-147
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 41

Conread position: 25-240
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 87, 35

Conread position: 26-296
Cow position:
Alignm length: 276
Alignm identity: 198
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 43, 19

Conread position: 30-210
Cow position:
Alignm length: 186
Alignm identity: 145
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 28, 0

Conread position: 33-241
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 34, 102

Conread position: 34-187
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 144

Conread position: 34-203
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 36-293
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 7

Conread position: 37-226
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 39-202
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 99

Conread position: 39-296
Cow position:
Alignm length: 261
Alignm identity: 180
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 76

Conread position: 53-237
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 55-296
Cow position:
Alignm length: 245
Alignm identity: 167
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 21, 76

Conread position: 56-240
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 65-292
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 225, 79

Conread position: 76-339
Cow position:
Alignm length: 266
Alignm identity: 181
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 106, 154

Conread position: 82-296
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 208, 114

Conread position: 90-292
Cow position:
Alignm length: 203
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 106, 0

Show alignments to all cow chromosomes.