Cow genome map

Conread name: Ss1.1-Lng1-LNG010041H06.5

Conread position: 1-132
Cow position:
Alignm length: 139
Alignm identity: 116
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 1-187
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 71

Conread position: 1-199
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 15, 202

Conread position: 1-201
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 1-202
Cow position:
Alignm length: 207
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 1-202
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 139

Conread position: 1-202
Cow position:
Alignm length: 208
Alignm identity: 162
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 15, 0

Conread position: 1-205
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 140

Conread position: 1-237
Cow position:
Alignm length: 251
Alignm identity: 188
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 131

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 15, 165

Conread position: 1-240
Cow position:
Alignm length: 257
Alignm identity: 174
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 158

Conread position: 1-240
Cow position:
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 1-240
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 15, 32

Conread position: 1-245
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 12, 80

Conread position: 1-293
Cow position:
Alignm length: 298
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 15, 87

Conread position: 1-293
Cow position:
Alignm length: 300
Alignm identity: 211
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 15, 30

Conread position: 1-296
Cow position:
Alignm length: 299
Alignm identity: 204
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 54

Conread position: 2-132
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 2-182
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 2-182
Cow position:
Alignm length: 183
Alignm identity: 144
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 60

Conread position: 2-194
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 30

Conread position: 2-194
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 126

Conread position: 2-196
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 11, 112

Conread position: 2-202
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 14, 0

Conread position: 2-202
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 117

Conread position: 2-202
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 114

Conread position: 2-205
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 2-219
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 59

Conread position: 2-235
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 14, 190

Conread position: 2-236
Cow position:
Alignm length: 242
Alignm identity: 176
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 2-236
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 57

Conread position: 2-240
Cow position:
Alignm length: 257
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 38

Conread position: 2-240
Cow position:
Alignm length: 249
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 65

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 173
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 14, 62

Conread position: 2-240
Cow position:
Alignm length: 243
Alignm identity: 178
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 182, 30

Conread position: 2-245
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 16, 42

Conread position: 2-293
Cow position:
Alignm length: 295
Alignm identity: 203
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 55

Conread position: 2-296
Cow position:
Alignm length: 307
Alignm identity: 213
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 236

Conread position: 2-296
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 14, 201

Conread position: 3-182
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 133

Conread position: 5-201
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 5-203
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 42

Conread position: 5-206
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 0

Conread position: 5-218
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 5-218
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 133

Conread position: 5-218
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 11, 29

Conread position: 5-240
Cow position:
Alignm length: 248
Alignm identity: 185
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 53

Conread position: 5-240
Cow position:
Alignm length: 244
Alignm identity: 184
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 11, 199

Conread position: 5-296
Cow position:
Alignm length: 297
Alignm identity: 216
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 15, 194

Conread position: 5-296
Cow position:
Alignm length: 304
Alignm identity: 212
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 11, 246

Conread position: 6-182
Cow position:
Alignm length: 180
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 6-194
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 66

Conread position: 6-194
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 6-194
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 59

Conread position: 6-203
Cow position:
Alignm length: 202
Alignm identity: 138
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 74, 53

Conread position: 6-206
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 165

Conread position: 6-218
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 145

Conread position: 6-237
Cow position:
Alignm length: 237
Alignm identity: 162
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 126

Conread position: 6-240
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 9, 26

Conread position: 6-283
Cow position:
Alignm length: 280
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 28

Conread position: 6-296
Cow position:
Alignm length: 300
Alignm identity: 207
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 44

Conread position: 6-323
Cow position:
Alignm length: 340
Alignm identity: 236
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 10, 32

Conread position: 6-332
Cow position:
Alignm length: 332
Alignm identity: 220
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 111

Conread position: 7-202
Cow position:
Alignm length: 202
Alignm identity: 139
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 7-237
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 61, 129

Conread position: 9-162
Cow position:
Alignm length: 156
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 9-181
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 130

Conread position: 9-194
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 18

Conread position: 9-222
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 62

Conread position: 9-242
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 50, 98

Conread position: 9-296
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 225

Conread position: 10-194
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 45, 61

Conread position: 10-195
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 10-232
Cow position:
Alignm length: 224
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 100

Conread position: 11-240
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 12-218
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 13-212
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 185, 50

Conread position: 14-121
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 14-170
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 14

Conread position: 14-170
Cow position:
Alignm length: 157
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 14-182
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 14-182
Cow position:
Alignm length: 173
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 14-194
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 49, 107

Conread position: 14-194
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 56

Conread position: 14-194
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 58, 9

Conread position: 14-194
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 14-202
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 9

Conread position: 14-203
Cow position:
Alignm length: 196
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 58, 182

Conread position: 14-203
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 14-206
Cow position:
Alignm length: 193
Alignm identity: 151
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 14-218
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 190, 42

Conread position: 14-230
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 65, 0

Conread position: 14-236
Cow position:
Alignm length: 230
Alignm identity: 155
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 48, 222

Conread position: 14-237
Cow position:
Alignm length: 230
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 178

Conread position: 14-237
Cow position:
Alignm length: 230
Alignm identity: 177
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 190, 48

Conread position: 14-237
Cow position:
Alignm length: 229
Alignm identity: 153
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 50, 191

Conread position: 14-240
Cow position:
Alignm length: 240
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 14-240
Cow position:
Alignm length: 231
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 0

Conread position: 14-240
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 51, 0

Conread position: 14-275
Cow position:
Alignm length: 268
Alignm identity: 183
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 34

Conread position: 14-293
Cow position:
Alignm length: 295
Alignm identity: 206
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 63, 12

Conread position: 14-296
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 43, 0

Conread position: 14-296
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 32, 132

Conread position: 14-296
Cow position:
Alignm length: 287
Alignm identity: 195
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 58, 68

Conread position: 14-304
Cow position:
Alignm length: 292
Alignm identity: 194
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 58, 107

Conread position: 15-170
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 15-194
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 21

Conread position: 15-194
Cow position:
Alignm length: 185
Alignm identity: 146
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 55, 11

Conread position: 16-218
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 101

Conread position: 16-240
Cow position:
Alignm length: 240
Alignm identity: 174
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 17-182
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 15

Conread position: 17-194
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 18-208
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 54, 44

Conread position: 18-219
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 52, 171

Conread position: 18-237
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 80, 41

Conread position: 20-218
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 20-240
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 43, 218

Conread position: 21-218
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 38, 167

Conread position: 22-164
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 24-202
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 24

Conread position: 25-202
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 26-237
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 26-293
Cow position:
Alignm length: 274
Alignm identity: 194
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 174

Conread position: 27-234
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 150

Conread position: 30-204
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 33, 109

Conread position: 30-234
Cow position:
Alignm length: 211
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 33-170
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 33-182
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 34-296
Cow position:
Alignm length: 268
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 40, 204

Conread position: 35-202
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 35-240
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 37-202
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 109

Conread position: 37-202
Cow position:
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 44-202
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 148

Conread position: 55-240
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 148, 19

Conread position: 56-212
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 56-240
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 132, 0

Conread position: 61-296
Cow position:
Alignm length: 243
Alignm identity: 163
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 33, 71

Conread position: 62-237
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 63-240
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 141, 0

Conread position: 71-240
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 125, 0

Conread position: 72-219
Cow position:
Alignm length: 148
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 72-237
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 132, 0

Conread position: 86-296
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 104, 96

Conread position: 88-240
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 0

Show alignments to all cow chromosomes.