Cow genome map


           Conread name:
           Ss1.1-Lng1-LNG010042C10.5.5
        

               Conread position:
               18-296
               

               Cow position:
               chr23:20799341-20799085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               289-461
               

               Cow position:
               chr23:20797919-20797747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               456-596
               

               Cow position:
               chr23:20797496-20797356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               132
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               640-826
               

               Cow position:
               chr23:20797060-20796874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               822-977
               

               Cow position:
               chr23:20791777-20791622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               145
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               976-1075
               

               Cow position:
               chr23:20791412-20791313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1072-1194
               

               Cow position:
               chr23:20791224-20791102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               119
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1168-1339
               

               Cow position:
               chr23:20790990-20790820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               152
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1333-1429
               

               Cow position:
               chr23:20790606-20790510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1427-1504
               

               Cow position:
               chr23:20790425-20790348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               78
               

               Alignm identity:
               76
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.