Cow genome map

Conread name: Ss1.1-Lng1-LNG010046H10.5

Conread position: 291-502
Cow position: chr12:21090795-21091011 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 104, 154

Conread position: 321-504
Cow position: chr12:17981365-17981178 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 85, 52

Conread position: 321-504
Cow position: chr12:22517965-22518154 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 322-446
Cow position: chr12:32986481-32986356 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 322-456
Cow position: chr12:30501586-30501450 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 322-500
Cow position: chr12:20459773-20459957 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 322-500
Cow position: chr12:22202722-22202906 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 322-500
Cow position: chr12:24029784-24029966 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 85

Conread position: 322-500
Cow position: chr12:25260567-25260752 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 322-500
Cow position: chr12:27852999-27853184 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 51

Conread position: 322-500
Cow position: chr12:27929846-27930030 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 322-500
Cow position: chr12:28764053-28764240 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 322-500
Cow position: chr12:40538654-40538838 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 76, 0

Conread position: 322-500
Cow position: chr12:42856585-42856767 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 50

Conread position: 322-501
Cow position: chr12:41338284-41338466 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 99

Conread position: 322-502
Cow position: chr12:42232255-42232069 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 59, 49

Conread position: 322-503
Cow position: chr12:62262-62449 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 322-503
Cow position: chr12:536623-536810 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 322-503
Cow position: chr12:11101194-11101007 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 322-503
Cow position: chr12:21309107-21309294 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 322-503
Cow position: chr12:22593702-22593517 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 322-504
Cow position: chr12:1437874-1437686 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 322-504
Cow position: chr12:1469179-1469367 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 322-504
Cow position: chr12:1511818-1512006 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 322-504
Cow position: chr12:1886406-1886594 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 322-504
Cow position: chr12:3363889-3363700 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 322-504
Cow position: chr12:5327964-5328151 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 89

Conread position: 322-504
Cow position: chr12:6106402-6106590 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 26

Conread position: 322-504
Cow position: chr12:10358641-10358456 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 124, 68

Conread position: 322-504
Cow position: chr12:10931022-10930834 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 322-504
Cow position: chr12:12755209-12755397 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 50

Conread position: 322-504
Cow position: chr12:13259366-13259178 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 74, 104

Conread position: 322-504
Cow position: chr12:14568869-14569057 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 322-504
Cow position: chr12:15539744-15539556 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 322-504
Cow position: chr12:17718246-17718059 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 94

Conread position: 322-504
Cow position: chr12:21430909-21430721 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 113, 0

Conread position: 322-504
Cow position: chr12:21610539-21610350 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 49

Conread position: 322-504
Cow position: chr12:21665081-21664894 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 77, 10

Conread position: 322-504
Cow position: chr12:22480050-22480239 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 322-504
Cow position: chr12:22748160-22747972 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 322-504
Cow position: chr12:24696491-24696304 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 77, 10

Conread position: 322-504
Cow position: chr12:24980667-24980479 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 322-504
Cow position: chr12:24992877-24993065 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 322-504
Cow position: chr12:25266387-25266575 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 76, 0

Conread position: 322-504
Cow position: chr12:26822631-26822443 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 322-504
Cow position: chr12:27506703-27506891 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 322-504
Cow position: chr12:27958580-27958768 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 322-504
Cow position: chr12:27994046-27993858 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 322-504
Cow position: chr12:30686686-30686499 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 70, 181

Conread position: 322-504
Cow position: chr12:31027875-31028059 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 124, 66

Conread position: 322-504
Cow position: chr12:31423849-31424037 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 322-504
Cow position: chr12:32656500-32656313 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 77, 109

Conread position: 322-504
Cow position: chr12:34176310-34176122 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 322-504
Cow position: chr12:34964353-34964540 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 76, 98

Conread position: 322-504
Cow position: chr12:35548181-35548368 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 322-504
Cow position: chr12:36213202-36213014 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 49

Conread position: 322-504
Cow position: chr12:36405722-36405910 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 322-504
Cow position: chr12:37561954-37561766 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 169

Conread position: 322-504
Cow position: chr12:38893308-38893120 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 322-504
Cow position: chr12:39930114-39929926 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 322-504
Cow position: chr12:42605230-42605418 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 322-504
Cow position: chr12:46163685-46163497 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 322-504
Cow position: chr12:47803122-47802938 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 80, 0

Conread position: 322-510
Cow position: chr12:1407777-1407586 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 80

Conread position: 322-510
Cow position: chr12:12928960-12929151 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 56

Conread position: 322-511
Cow position: chr12:20847084-20846889 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 322-515
Cow position: chr12:19861632-19861445 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 96

Conread position: 322-547
Cow position: chr12:21211694-21211459 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 323-504
Cow position: chr12:18585617-18585434 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 45

Conread position: 323-504
Cow position: chr12:23138384-23138568 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 123, 76

Conread position: 324-493
Cow position: chr12:3094679-3094854 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 74, 0

Conread position: 324-500
Cow position: chr12:8675120-8675302 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 0

Conread position: 324-502
Cow position: chr12:1774973-1775155 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 122, 0

Conread position: 324-502
Cow position: chr12:21392080-21392264 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 324-504
Cow position: chr12:758364-758176 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 324-504
Cow position: chr12:3717330-3717512 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 118, 72

Conread position: 324-504
Cow position: chr12:20994815-20994999 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 101

Conread position: 324-513
Cow position: chr12:25097320-25097514 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 74, 187

Conread position: 325-504
Cow position: chr12:17968931-17968754 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 130, 72

Conread position: 326-500
Cow position: chr12:1500089-1499911 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 36

Conread position: 326-500
Cow position: chr12:5712904-5712733 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 38

Conread position: 326-501
Cow position: chr12:21945984-21945803 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 327-495
Cow position: chr12:17662915-17662740 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 331-504
Cow position: chr12:45144994-45144814 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 332-504
Cow position: chr12:35311957-35312133 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 89

Conread position: 333-502
Cow position: chr12:47168065-47167889 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 333-504
Cow position: chr12:30141358-30141181 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 334-502
Cow position: chr12:23159964-23160138 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 43

Conread position: 335-504
Cow position: chr12:27479711-27479537 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 150

Conread position: 344-504
Cow position: chr12:22571767-22571601 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 352-504
Cow position: chr12:7961821-7961979 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 136

Conread position: 365-493
Cow position: chr12:8843037-8843171 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.