Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010046H10.5 |
| Conread position: | 321-504 |
| Cow position: | chr27:25965009-25965198 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 322-451 |
| Cow position: | chr27:26784768-26784637 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-451 |
| Cow position: | chr27:27235159-27235290 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 322-457 |
| Cow position: | chr27:29447130-29447267 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-466 |
| Cow position: | chr27:5925219-5925074 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-470 |
| Cow position: | chr27:22329160-22329011 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 84, 139 |
| Conread position: | 322-478 |
| Cow position: | chr27:10578892-10578730 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-485 |
| Cow position: | chr27:2000791-2000620 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-498 |
| Cow position: | chr27:12749979-12749797 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-498 |
| Cow position: | chr27:15634388-15634568 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 104 |
| Conread position: | 322-500 |
| Cow position: | chr27:3232588-3232769 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 322-500 |
| Cow position: | chr27:3991951-3991769 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 76, 51 |
| Conread position: | 322-500 |
| Cow position: | chr27:4982318-4982134 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-500 |
| Cow position: | chr27:9990263-9990446 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 77, 65 |
| Conread position: | 322-500 |
| Cow position: | chr27:10379133-10378949 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-500 |
| Cow position: | chr27:13900840-13900656 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-500 |
| Cow position: | chr27:15034147-15034330 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-500 |
| Cow position: | chr27:19523762-19523950 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-502 |
| Cow position: | chr27:1082216-1082403 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-502 |
| Cow position: | chr27:15273126-15273313 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 322-504 |
| Cow position: | chr27:773721-773533 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr27:1520626-1520438 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr27:1536127-1535942 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 124, 77 |
| Conread position: | 322-504 |
| Cow position: | chr27:8960083-8960271 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr27:9332693-9332505 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr27:12146697-12146885 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr27:14297164-14296974 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr27:15543961-15543773 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr27:16031451-16031639 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr27:18697287-18697099 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr27:20810367-20810172 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr27:22647960-22648148 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr27:22742468-22742648 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 143 |
| Conread position: | 322-504 |
| Cow position: | chr27:24260742-24260936 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 322-504 |
| Cow position: | chr27:25801259-25801447 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr27:26856012-26855821 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 103 |
| Conread position: | 322-504 |
| Cow position: | chr27:27665947-27665759 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr27:29036423-29036612 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-510 |
| Cow position: | chr27:6017586-6017396 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 61, 94 |
| Conread position: | 322-511 |
| Cow position: | chr27:8592012-8591819 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 76, 102 |
| Conread position: | 322-511 |
| Cow position: | chr27:15874142-15874332 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 322-511 |
| Cow position: | chr27:21451391-21451194 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 322-520 |
| Cow position: | chr27:28685754-28685960 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 322-523 |
| Cow position: | chr27:17568049-17567841 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 77, 198 |
| Conread position: | 323-510 |
| Cow position: | chr27:23317989-23318170 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 9 |
| Conread position: | 324-502 |
| Cow position: | chr27:5984086-5984271 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 324-504 |
| Cow position: | chr27:4331796-4331982 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 324-504 |
| Cow position: | chr27:27045127-27044941 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 324-504 |
| Cow position: | chr27:30571777-30571591 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 74, 63 |
| Conread position: | 324-511 |
| Cow position: | chr27:8426802-8426613 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 324-511 |
| Cow position: | chr27:25799203-25799009 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 29 |
| Conread position: | 329-500 |
| Cow position: | chr27:15405588-15405412 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 72, 150 |
| Conread position: | 329-504 |
| Cow position: | chr27:11488946-11488770 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 117, 65 |
| Conread position: | 329-504 |
| Cow position: | chr27:31268165-31267987 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 117, 70 |
| Conread position: | 330-504 |
| Cow position: | chr27:30035753-30035572 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 331-502 |
| Cow position: | chr27:30584223-30584399 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 68, 46 |
| Conread position: | 331-511 |
| Cow position: | chr27:2897269-2897086 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 41 |
| Conread position: | 332-504 |
| Cow position: | chr27:28923944-28923771 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 114, 50 |
| Conread position: | 334-504 |
| Cow position: | chr27:8972379-8972205 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 345-504 |
| Cow position: | chr27:8200730-8200565 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 365-510 |
| Cow position: | chr27:20761586-20761434 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 369-510 |
| Cow position: | chr27:16427574-16427431 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 379-500 |
| Cow position: | chr27:25785725-25785852 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.