Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010046H10.5 |
| Conread position: | 280-502 |
| Cow position: | chr9:10110521-10110303 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 166, 8 |
| Conread position: | 312-504 |
| Cow position: | chr9:3388939-3389132 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 94 |
| Conread position: | 317-445 |
| Cow position: | chr9:15835830-15835958 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 81, 108 |
| Conread position: | 317-504 |
| Cow position: | chr9:23044327-23044124 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 318-504 |
| Cow position: | chr9:13472707-13472892 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 71, 135 |
| Conread position: | 318-504 |
| Cow position: | chr9:20319663-20319475 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 7, 107 |
| Conread position: | 321-500 |
| Cow position: | chr9:47005592-47005408 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 321-504 |
| Cow position: | chr9:35747033-35747217 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 93 |
| Conread position: | 321-511 |
| Cow position: | chr9:31093068-31093259 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 321-512 |
| Cow position: | chr9:25976381-25976184 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 111 |
| Conread position: | 322-431 |
| Cow position: | chr9:30475124-30475015 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 80, 94 |
| Conread position: | 322-435 |
| Cow position: | chr9:20577725-20577607 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 322-435 |
| Cow position: | chr9:46525356-46525469 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 322-460 |
| Cow position: | chr9:3960317-3960457 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 322-460 |
| Cow position: | chr9:11544551-11544411 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 37 |
| Conread position: | 322-460 |
| Cow position: | chr9:52002245-52002383 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 73, 104 |
| Conread position: | 322-469 |
| Cow position: | chr9:52401809-52401662 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 77, 142 |
| Conread position: | 322-474 |
| Cow position: | chr9:27392765-27392611 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-478 |
| Cow position: | chr9:3052132-3052291 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 124, 82 |
| Conread position: | 322-482 |
| Cow position: | chr9:2835145-2835311 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-491 |
| Cow position: | chr9:28785192-28785011 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-491 |
| Cow position: | chr9:37072216-37072386 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 77 |
| Conread position: | 322-496 |
| Cow position: | chr9:16516605-16516428 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 50 |
| Conread position: | 322-496 |
| Cow position: | chr9:22438204-22438026 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 76, 115 |
| Conread position: | 322-497 |
| Cow position: | chr9:1991685-1991866 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-498 |
| Cow position: | chr9:11851014-11851196 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 124, 80 |
| Conread position: | 322-498 |
| Cow position: | chr9:39813165-39812983 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-499 |
| Cow position: | chr9:5627669-5627486 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-500 |
| Cow position: | chr9:1741016-1741200 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-500 |
| Cow position: | chr9:2806512-2806694 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-500 |
| Cow position: | chr9:3729898-3729717 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 322-500 |
| Cow position: | chr9:6764922-6765105 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 322-500 |
| Cow position: | chr9:7005569-7005385 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-500 |
| Cow position: | chr9:7059215-7059396 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 50 |
| Conread position: | 322-500 |
| Cow position: | chr9:10567516-10567700 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 124, 77 |
| Conread position: | 322-500 |
| Cow position: | chr9:10856870-10856686 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-500 |
| Cow position: | chr9:17303122-17303306 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-500 |
| Cow position: | chr9:17870344-17870160 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-500 |
| Cow position: | chr9:18539513-18539330 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 22 |
| Conread position: | 322-500 |
| Cow position: | chr9:22655662-22655479 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 77, 14 |
| Conread position: | 322-500 |
| Cow position: | chr9:23421443-23421256 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 322-500 |
| Cow position: | chr9:27037958-27037774 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-500 |
| Cow position: | chr9:28658199-28658383 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-500 |
| Cow position: | chr9:29337612-29337431 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 322-500 |
| Cow position: | chr9:30674925-30674741 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 322-500 |
| Cow position: | chr9:31810428-31810245 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 157 |
| Conread position: | 322-500 |
| Cow position: | chr9:37067697-37067512 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 80, 55 |
| Conread position: | 322-500 |
| Cow position: | chr9:40143504-40143687 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 76, 172 |
| Conread position: | 322-500 |
| Cow position: | chr9:59479998-59480182 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-500 |
| Cow position: | chr9:59508323-59508507 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 156 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 76, 92 |
| Conread position: | 322-500 |
| Cow position: | chr9:61740185-61740369 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 150 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-501 |
| Cow position: | chr9:9327215-9327389 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 76, 137 |
| Conread position: | 322-502 |
| Cow position: | chr9:2484766-2484952 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-502 |
| Cow position: | chr9:3075011-3074825 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 9 |
| Conread position: | 322-502 |
| Cow position: | chr9:3997908-3998097 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 322-502 |
| Cow position: | chr9:26325596-26325409 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-502 |
| Cow position: | chr9:34696095-34695911 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 322-502 |
| Cow position: | chr9:50840283-50840097 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-502 |
| Cow position: | chr9:54459652-54459837 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 322-503 |
| Cow position: | chr9:777964-778153 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-503 |
| Cow position: | chr9:17301280-17301468 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 322-503 |
| Cow position: | chr9:18109269-18109085 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 135, 74 |
| Conread position: | 322-503 |
| Cow position: | chr9:38678978-38678792 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 77, 109 |
| Conread position: | 322-503 |
| Cow position: | chr9:41506996-41507183 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:128002-128189 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 77, 32 |
| Conread position: | 322-504 |
| Cow position: | chr9:202434-202628 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:218265-218453 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:1000315-1000127 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:1062845-1063037 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:1099444-1099256 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:1249147-1249335 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:1850764-1850952 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 322-504 |
| Cow position: | chr9:2173385-2173199 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 77, 51 |
| Conread position: | 322-504 |
| Cow position: | chr9:2856694-2856506 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:2873324-2873136 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:3061441-3061253 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:3412070-3412255 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 322-504 |
| Cow position: | chr9:3756981-3757169 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:4940648-4940837 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:5430317-5430129 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:5452790-5452978 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:6550027-6549839 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:6708067-6708257 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:7104381-7104569 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:8283358-8283546 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:9015924-9015736 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:9492498-9492691 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:9958333-9958518 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 124, 77 |
| Conread position: | 322-504 |
| Cow position: | chr9:10643788-10643976 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:10939574-10939386 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 322-504 |
| Cow position: | chr9:13312415-13312227 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:14002890-14002702 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:14794704-14794520 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 100 |
| Conread position: | 322-504 |
| Cow position: | chr9:15053030-15053220 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 76, 103 |
| Conread position: | 322-504 |
| Cow position: | chr9:17017604-17017411 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:18506974-18507162 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:21412162-21411974 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:27782040-27782228 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:27897858-27897675 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 322-504 |
| Cow position: | chr9:28681050-28680862 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:32972217-32972038 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 322-504 |
| Cow position: | chr9:34240249-34240437 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:34688223-34688045 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 83, 132 |
| Conread position: | 322-504 |
| Cow position: | chr9:35543678-35543866 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:35593239-35593432 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 32 |
| Conread position: | 322-504 |
| Cow position: | chr9:43493794-43493606 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:43495984-43495796 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:44168440-44168252 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:46627161-46626975 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 77, 23 |
| Conread position: | 322-504 |
| Cow position: | chr9:46667950-46668136 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 77, 89 |
| Conread position: | 322-504 |
| Cow position: | chr9:47044797-47044609 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:47170898-47170708 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:48795442-48795630 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:49457175-49456987 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:50003298-50003121 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 130 |
| Conread position: | 322-504 |
| Cow position: | chr9:56166564-56166750 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:56176620-56176432 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:56301590-56301778 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:59431358-59431179 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 124, 79 |
| Conread position: | 322-504 |
| Cow position: | chr9:62444124-62444312 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-504 |
| Cow position: | chr9:64012379-64012567 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 322-510 |
| Cow position: | chr9:14766908-14766719 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 124, 35 |
| Conread position: | 322-511 |
| Cow position: | chr9:8952187-8952382 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-511 |
| Cow position: | chr9:26277504-26277309 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-511 |
| Cow position: | chr9:40416208-40416392 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 84, 38 |
| Conread position: | 322-511 |
| Cow position: | chr9:52723257-52723061 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 39, 103 |
| Conread position: | 322-513 |
| Cow position: | chr9:26088149-26088348 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 51 |
| Conread position: | 322-527 |
| Cow position: | chr9:28024669-28024458 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 322-1152 |
| Cow position: | chr9:17008112-17008961 (view UCSC Genome Browser custom track) |
| Alignm length: | 850 |
| Alignm identity: | 763 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 323-469 |
| Cow position: | chr9:6979052-6978908 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 77 |
| Conread position: | 323-501 |
| Cow position: | chr9:18569693-18569865 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 97 |
| Conread position: | 323-504 |
| Cow position: | chr9:8738649-8738835 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 323-504 |
| Cow position: | chr9:36845078-36845260 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 122, 76 |
| Conread position: | 323-504 |
| Cow position: | chr9:42570065-42569878 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 323-513 |
| Cow position: | chr9:12161457-12161262 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 72, 188 |
| Conread position: | 323-513 |
| Cow position: | chr9:34946173-34946370 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 75, 190 |
| Conread position: | 324-500 |
| Cow position: | chr9:37158762-37158944 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 324-502 |
| Cow position: | chr9:3545675-3545492 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 324-504 |
| Cow position: | chr9:3311467-3311281 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 68, 58 |
| Conread position: | 324-504 |
| Cow position: | chr9:11157514-11157697 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 94, 75 |
| Conread position: | 324-504 |
| Cow position: | chr9:21461327-21461147 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 68, 77 |
| Conread position: | 324-504 |
| Cow position: | chr9:54995485-54995310 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 82, 63 |
| Conread position: | 324-504 |
| Cow position: | chr9:55797256-55797442 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 324-505 |
| Cow position: | chr9:28774394-28774579 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 74, 161 |
| Conread position: | 324-510 |
| Cow position: | chr9:1071436-1071629 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 324-511 |
| Cow position: | chr9:59196705-59196510 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 325-502 |
| Cow position: | chr9:19078491-19078323 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 325-504 |
| Cow position: | chr9:33068648-33068826 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 124, 27 |
| Conread position: | 326-502 |
| Cow position: | chr9:2222283-2222466 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 326-504 |
| Cow position: | chr9:3576426-3576610 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 327-500 |
| Cow position: | chr9:51179059-51179235 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 28 |
| Conread position: | 327-504 |
| Cow position: | chr9:31417659-31417842 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 329-502 |
| Cow position: | chr9:6886435-6886255 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 329-504 |
| Cow position: | chr9:43667674-43667495 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 45 |
| Conread position: | 330-462 |
| Cow position: | chr9:37097464-37097330 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 330-501 |
| Cow position: | chr9:5534090-5534267 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 330-502 |
| Cow position: | chr9:5525777-5525954 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 332-504 |
| Cow position: | chr9:4306229-4306407 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 342-504 |
| Cow position: | chr9:44203239-44203407 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 345-501 |
| Cow position: | chr9:29787834-29787993 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 54 |
| Conread position: | 347-504 |
| Cow position: | chr9:3934821-3934987 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 352-500 |
| Cow position: | chr9:19156465-19156618 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 32 |
Show alignments to all cow chromosomes.