Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010061E04.5 |
| Conread position: | 3-425 |
| Cow position: | chrX:29799065-29798647 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 277 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 84, 155 |
| Conread position: | 52-452 |
| Cow position: | chrX:19927438-19927841 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 56, 72 |
| Conread position: | 55-470 |
| Cow position: | chrX:17632713-17632285 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 279 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 101, 26 |
| Conread position: | 61-363 |
| Cow position: | chrX:6251494-6251195 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 197 |
| Conread position: | 65-308 |
| Cow position: | chrX:28876408-28876169 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 192, 34 |
| Conread position: | 94-342 |
| Cow position: | chrX:41890199-41889954 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 157, 102 |
| Conread position: | 204-441 |
| Cow position: | chrX:29812992-29813229 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 54 |
| Conread position: | 213-452 |
| Cow position: | chrX:27409190-27409418 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 260-474 |
| Cow position: | chrX:978955-979167 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 264-447 |
| Cow position: | chrX:31192422-31192242 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 286-448 |
| Cow position: | chrX:24137035-24136873 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 288-454 |
| Cow position: | chrX:28876029-28875863 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 138, 82 |
Show alignments to all cow chromosomes.