Cow genome map

Conread name: Ss1.1-Lng1-LNG010063B07.5

Conread position: 67-372
Cow position: chrX:864621-864325 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 98

Conread position: 159-422
Cow position: chrX:8962209-8961945 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 64

Conread position: 191-369
Cow position: chrX:25429721-25429536 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 36

Conread position: 191-374
Cow position: chrX:36838359-36838549 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 50

Conread position: 191-420
Cow position: chrX:28586629-28586864 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 21, 35

Conread position: 191-431
Cow position: chrX:16036799-16036558 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 36

Conread position: 191-431
Cow position: chrX:16780930-16781176 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 47

Conread position: 191-431
Cow position: chrX:38149239-38149486 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 35, 22

Conread position: 191-443
Cow position: chrX:27592341-27592082 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 36

Conread position: 191-444
Cow position: chrX:4743366-4743104 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 51

Conread position: 191-444
Cow position: chrX:21581134-21581394 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 169
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 69, 180

Conread position: 191-444
Cow position: chrX:21590950-21591207 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 41

Conread position: 191-445
Cow position: chrX:322112-322372 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 22

Conread position: 191-445
Cow position: chrX:9094291-9094551 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 58

Conread position: 191-445
Cow position: chrX:13411482-13411223 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 34

Conread position: 191-445
Cow position: chrX:20724614-20724875 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 40

Conread position: 191-445
Cow position: chrX:21752794-21752528 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 56

Conread position: 191-445
Cow position: chrX:21831155-21831416 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 70, 180

Conread position: 191-445
Cow position: chrX:22127485-22127224 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 44, 180

Conread position: 191-445
Cow position: chrX:23278671-23278932 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 180

Conread position: 191-445
Cow position: chrX:23454371-23454110 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 172
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 180

Conread position: 191-445
Cow position: chrX:27979171-27978911 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 22

Conread position: 191-445
Cow position: chrX:30182279-30182022 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 70, 22

Conread position: 191-446
Cow position: chrX:26342635-26342377 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 70, 179

Conread position: 191-447
Cow position: chrX:41849576-41849314 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 32

Conread position: 191-450
Cow position: chrX:20760253-20759990 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 21

Conread position: 191-458
Cow position: chrX:21225119-21225390 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 180

Conread position: 192-360
Cow position: chrX:5393198-5393022 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 50

Conread position: 192-400
Cow position: chrX:27124053-27124268 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 50

Conread position: 192-400
Cow position: chrX:29936247-29936462 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 35

Conread position: 192-410
Cow position: chrX:37813795-37814022 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 50

Conread position: 192-412
Cow position: chrX:30168430-30168197 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 182

Conread position: 192-419
Cow position: chrX:14783829-14783597 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 33

Conread position: 192-421
Cow position: chrX:3374260-3374024 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 69, 179

Conread position: 192-421
Cow position: chrX:10530141-10529906 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 34

Conread position: 192-422
Cow position: chrX:673558-673321 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 20, 39

Conread position: 192-422
Cow position: chrX:15117455-15117223 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 53

Conread position: 192-422
Cow position: chrX:15177787-15177550 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 179

Conread position: 192-422
Cow position: chrX:24323916-24323680 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 20, 50

Conread position: 192-422
Cow position: chrX:24771213-24770974 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 181

Conread position: 192-422
Cow position: chrX:28505620-28505383 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 50

Conread position: 192-422
Cow position: chrX:29909776-29909540 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 34

Conread position: 192-431
Cow position: chrX:1941717-1941469 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 52

Conread position: 192-431
Cow position: chrX:2561207-2560961 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 51

Conread position: 192-431
Cow position: chrX:2814834-2814589 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 34

Conread position: 192-431
Cow position: chrX:2857728-2857483 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 34

Conread position: 192-431
Cow position: chrX:3083488-3083243 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 50

Conread position: 192-431
Cow position: chrX:3466998-3466752 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 50

Conread position: 192-431
Cow position: chrX:5600861-5600614 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 180

Conread position: 192-431
Cow position: chrX:7032102-7032349 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 181

Conread position: 192-431
Cow position: chrX:7095117-7095362 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 30

Conread position: 192-431
Cow position: chrX:8589829-8590079 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 52

Conread position: 192-431
Cow position: chrX:9126730-9126973 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 50

Conread position: 192-431
Cow position: chrX:11147684-11147439 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 20, 40

Conread position: 192-431
Cow position: chrX:13930084-13929839 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 12

Conread position: 192-431
Cow position: chrX:14596493-14596739 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 50

Conread position: 192-431
Cow position: chrX:15622855-15622602 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 110

Conread position: 192-431
Cow position: chrX:16277298-16277542 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 34

Conread position: 192-431
Cow position: chrX:16361471-16361226 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 20, 39

Conread position: 192-431
Cow position: chrX:16684187-16683941 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 69, 179

Conread position: 192-431
Cow position: chrX:17053200-17053446 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 39

Conread position: 192-431
Cow position: chrX:17476771-17476525 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 50

Conread position: 192-431
Cow position: chrX:18221067-18221312 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 178

Conread position: 192-431
Cow position: chrX:19397418-19397665 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 20, 50

Conread position: 192-431
Cow position: chrX:21766267-21766512 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 34

Conread position: 192-431
Cow position: chrX:24446580-24446334 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 35

Conread position: 192-431
Cow position: chrX:26398477-26398231 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 50

Conread position: 192-431
Cow position: chrX:30436493-30436739 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 69, 179

Conread position: 192-431
Cow position: chrX:34094185-34093939 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 69, 179

Conread position: 192-431
Cow position: chrX:35531504-35531750 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 39

Conread position: 192-431
Cow position: chrX:37850789-37851034 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 34

Conread position: 192-443
Cow position: chrX:16810242-16809982 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 39

Conread position: 192-444
Cow position: chrX:8481096-8481357 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 34

Conread position: 192-444
Cow position: chrX:9009985-9010245 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 50

Conread position: 192-444
Cow position: chrX:15261974-15261707 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 186

Conread position: 192-444
Cow position: chrX:29095677-29095417 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 50

Conread position: 192-445
Cow position: chrX:2144618-2144876 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 171
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 33

Conread position: 192-445
Cow position: chrX:27410366-27410109 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 39

Conread position: 192-446
Cow position: chrX:20873406-20873146 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 29

Conread position: 195-422
Cow position: chrX:5282133-5281900 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 47

Conread position: 196-431
Cow position: chrX:11459164-11458923 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 45

Conread position: 197-431
Cow position: chrX:12358528-12358771 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 176

Conread position: 214-398
Cow position: chrX:6197559-6197367 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 182

Conread position: 214-440
Cow position: chrX:5359677-5359909 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 27

Conread position: 224-445
Cow position: chrX:9170688-9170468 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 146
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 84, 24

Conread position: 225-444
Cow position: chrX:39764269-39764490 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 51

Conread position: 225-445
Cow position: chrX:21731099-21730878 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 79

Conread position: 225-445
Cow position: chrX:23212371-23212156 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 27

Conread position: 259-413
Cow position: chrX:25321870-25321709 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 111

Conread position: 259-445
Cow position: chrX:6281065-6280878 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 38

Show alignments to all cow chromosomes.