Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010075C11.5 |
| Conread position: | 11-294 |
| Cow position: | chr10:9031380-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 18-452 |
| Cow position: | chr10:9031472-9031888 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 358, 111 |
| Conread position: | 20-506 |
| Cow position: | chr10:9010347-9009861 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 238 |
| Conread position: | 23-409 |
| Cow position: | chr10:21939016-21938633 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 267, 0 |
| Conread position: | 23-554 |
| Cow position: | chr10:8996532-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-864 |
| Cow position: | chr10:8996868-8996018 (view UCSC Genome Browser custom track) |
| Alignm length: | 853 |
| Alignm identity: | 582 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 74 |
| Conread position: | 24-378 |
| Cow position: | chr10:9031310-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-495 |
| Cow position: | chr10:21939099-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 249 |
| Conread position: | 24-633 |
| Cow position: | chr10:8996615-8996006 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 233 |
| Conread position: | 24-633 |
| Cow position: | chr10:9010511-9009902 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 81 |
| Conread position: | 26-462 |
| Cow position: | chr10:9031228-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 89 |
| Conread position: | 33-577 |
| Cow position: | chr10:21939174-21938633 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 210 |
| Conread position: | 45-616 |
| Cow position: | chr10:9010406-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 64-546 |
| Cow position: | chr10:9031182-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 68-625 |
| Cow position: | chr10:21939223-21938668 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 111 |
| Conread position: | 69-638 |
| Cow position: | chr10:9010550-9009981 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 179 |
| Conread position: | 119-859 |
| Cow position: | chr10:9010584-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 150 |
| Conread position: | 149-580 |
| Cow position: | chr10:21939226-21938795 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 271 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 189-861 |
| Cow position: | chr10:9010600-9009917 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 412 |
| Conread position: | 198-577 |
| Cow position: | chr10:9031232-9031611 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 236-633 |
| Cow position: | chr10:21939223-21938826 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 257 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 261-864 |
| Cow position: | chr10:8996882-8996270 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 374, 446 |
| Conread position: | 281-864 |
| Cow position: | chr10:9031231-9031804 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 65 |
| Conread position: | 326-864 |
| Cow position: | chr10:8996901-8996354 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 98 |
| Conread position: | 333-633 |
| Cow position: | chr10:9031199-9031499 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 405-626 |
| Cow position: | chr10:9031672-9031894 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 444-863 |
| Cow position: | chr10:9010511-9010083 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 196, 417 |
Show alignments to all cow chromosomes.