• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Lng1-LNG010075C11.5
        

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:42827617-42827922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr18:50295400-50295866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
167, 18
               

               
Conread position:
               
1-541
               

               
Cow position:
               
chr18:50281802-50282341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-586
               

               
Cow position:
               
chr18:50031022-50030436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 22
               

               
Conread position:
               
1-586
               

               
Cow position:
               
chr18:50083662-50084246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 18
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr18:42693667-42693046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 5
               

               
Conread position:
               
1-627
               

               
Cow position:
               
chr18:49032749-49032125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
513, 7
               

               
Conread position:
               
1-628
               

               
Cow position:
               
chr18:50295232-50295858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 17
               

               
Conread position:
               
1-633
               

               
Cow position:
               
chr18:42792185-42792815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
1-633
               

               
Cow position:
               
chr18:50048927-50048301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 20
               

               
Conread position:
               
1-857
               

               
Cow position:
               
chr18:50848632-50849495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
540
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 5
               

               
Conread position:
               
1-861
               

               
Cow position:
               
chr18:51400325-51401192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 5
               

               
Conread position:
               
1-863
               

               
Cow position:
               
chr18:53586871-53586001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
1-864
               

               
Cow position:
               
chr18:41197788-41198658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
634, 7
               

               
Conread position:
               
2-376
               

               
Cow position:
               
chr18:42984843-42984470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
3-864
               

               
Cow position:
               
chr18:56330226-56329356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
627, 704
               

               
Conread position:
               
4-561
               

               
Cow position:
               
chr18:14453890-14453330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
547, 0
               

               
Conread position:
               
4-823
               

               
Cow position:
               
chr18:42791598-42792426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
833
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 174
               

               
Conread position:
               
4-834
               

               
Cow position:
               
chr18:40086806-40085972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
534
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
6-450
               

               
Cow position:
               
chr18:43168093-43168536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
6-586
               

               
Cow position:
               
chr18:50059490-50058911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 17
               

               
Conread position:
               
6-617
               

               
Cow position:
               
chr18:50022015-50021402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
248, 13
               

               
Conread position:
               
6-628
               

               
Cow position:
               
chr18:50281639-50282260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
6-629
               

               
Cow position:
               
chr18:40086299-40085684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
6-633
               

               
Cow position:
               
chr18:43167841-43168467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 13
               

               
Conread position:
               
6-825
               

               
Cow position:
               
chr18:50098940-50099767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
834
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 13
               

               
Conread position:
               
6-829
               

               
Cow position:
               
chr18:50083331-50084162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
838
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 13
               

               
Conread position:
               
6-831
               

               
Cow position:
               
chr18:50022354-50021515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
843
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 17
               

               
Conread position:
               
6-860
               

               
Cow position:
               
chr18:50848216-50849078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
6-864
               

               
Cow position:
               
chr18:50059238-50058374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 13
               

               
Conread position:
               
7-395
               

               
Cow position:
               
chr18:42792526-42792913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
7-629
               

               
Cow position:
               
chr18:53635658-53635037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 17
               

               
Conread position:
               
7-863
               

               
Cow position:
               
chr18:49032996-49032132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 17
               

               
Conread position:
               
8-304
               

               
Cow position:
               
chr18:43174717-43174431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
8-366
               

               
Cow position:
               
chr18:56494147-56494503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
8-487
               

               
Cow position:
               
chr18:56316604-56317083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
461, 11
               

               
Conread position:
               
8-554
               

               
Cow position:
               
chr18:51400667-51401212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 15
               

               
Conread position:
               
8-559
               

               
Cow position:
               
chr18:52433621-52434171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 15
               

               
Conread position:
               
8-633
               

               
Cow position:
               
chr18:40075074-40075698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
8-790
               

               
Cow position:
               
chr18:56329634-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
794
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 659
               

               
Conread position:
               
8-796
               

               
Cow position:
               
chr18:40324581-40323789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
8-864
               

               
Cow position:
               
chr18:33064803-33063939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
8-864
               

               
Cow position:
               
chr18:49022363-49023225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
8-864
               

               
Cow position:
               
chr18:52447075-52447939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 15
               

               
Conread position:
               
8-864
               

               
Cow position:
               
chr18:52447243-52448107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
10-481
               

               
Cow position:
               
chr18:55066806-55066335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
10-521
               

               
Cow position:
               
chr18:53560314-53560821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
452, 0
               

               
Conread position:
               
10-625
               

               
Cow position:
               
chr18:42675101-42674486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 335
               

               
Conread position:
               
10-626
               

               
Cow position:
               
chr18:53509374-53509990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 245
               

               
Conread position:
               
10-626
               

               
Cow position:
               
chr18:53525828-53526444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 238
               

               
Conread position:
               
11-628
               

               
Cow position:
               
chr18:56316186-56316803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
11-864
               

               
Cow position:
               
chr18:56329715-56328852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
569
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 651
               

               
Conread position:
               
12-417
               

               
Cow position:
               
chr18:50271768-50272171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
155, 7
               

               
Conread position:
               
12-419
               

               
Cow position:
               
chr18:50246384-50246790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
75, 7
               

               
Conread position:
               
12-555
               

               
Cow position:
               
chr18:41198218-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 7
               

               
Conread position:
               
12-861
               

               
Cow position:
               
chr18:42792027-42792884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
553
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
623, 7
               

               
Conread position:
               
12-864
               

               
Cow position:
               
chr18:51368548-51367688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
517, 503
               

               
Conread position:
               
13-864
               

               
Cow position:
               
chr18:42675265-42674406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
565
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 8
               

               
Conread position:
               
16-861
               

               
Cow position:
               
chr18:51766023-51765170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 7
               

               
Conread position:
               
17-629
               

               
Cow position:
               
chr18:44253340-44252740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
18-384
               

               
Cow position:
               
chr18:44184322-44183956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
154, 162
               

               
Conread position:
               
18-388
               

               
Cow position:
               
chr18:50099959-50100329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
18-589
               

               
Cow position:
               
chr18:33093046-33092475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
18-590
               

               
Cow position:
               
chr18:53525920-53526490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
103, 93
               

               
Conread position:
               
18-633
               

               
Cow position:
               
chr18:44398211-44397596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 98
               

               
Conread position:
               
18-633
               

               
Cow position:
               
chr18:44398295-44397680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 166
               

               
Conread position:
               
18-831
               

               
Cow position:
               
chr18:53635816-53634994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
827
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 76
               

               
Conread position:
               
18-847
               

               
Cow position:
               
chr18:41949204-41948366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
844
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
18-849
               

               
Cow position:
               
chr18:44154139-44153318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 153
               

               
Conread position:
               
18-864
               

               
Cow position:
               
chr18:56248099-56247242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
534
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 193
               

               
Conread position:
               
19-307
               

               
Cow position:
               
chr18:33063869-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
19-313
               

               
Cow position:
               
chr18:43093105-43092812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
149, 158
               

               
Conread position:
               
19-340
               

               
Cow position:
               
chr18:40085959-40085637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
160, 150
               

               
Conread position:
               
19-376
               

               
Cow position:
               
chr18:43022338-43021981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-376
               

               
Cow position:
               
chr18:44240490-44240847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-418
               

               
Cow position:
               
chr18:50251144-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
151, 165
               

               
Conread position:
               
19-438
               

               
Cow position:
               
chr18:42837539-42837120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 95
               

               
Conread position:
               
19-485
               

               
Cow position:
               
chr18:55523873-55524339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
19-555
               

               
Cow position:
               
chr18:42792369-42792905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 222
               

               
Conread position:
               
19-561
               

               
Cow position:
               
chr18:56247584-56247054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
19-581
               

               
Cow position:
               
chr18:55018109-55018671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
19-589
               

               
Cow position:
               
chr18:56247668-56247108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 158
               

               
Conread position:
               
19-610
               

               
Cow position:
               
chr18:43120094-43119502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 69
               

               
Conread position:
               
19-627
               

               
Cow position:
               
chr18:50246054-50246662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 162
               

               
Conread position:
               
19-629
               

               
Cow position:
               
chr18:42744404-42743794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 146
               

               
Conread position:
               
19-629
               

               
Cow position:
               
chr18:42792285-42792895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 243
               

               
Conread position:
               
19-633
               

               
Cow position:
               
chr18:54979789-54980403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
19-633
               

               
Cow position:
               
chr18:55523705-55524319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 330
               

               
Conread position:
               
19-806
               

               
Cow position:
               
chr18:40074916-40075711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
803
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
19-830
               

               
Cow position:
               
chr18:54992797-54993617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
830
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
19-841
               

               
Cow position:
               
chr18:42837959-42837128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
834
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 227
               

               
Conread position:
               
19-859
               

               
Cow position:
               
chr18:54979537-54980386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
856
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
19-864
               

               
Cow position:
               
chr18:41197636-41198490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
616, 678
               

               
Conread position:
               
19-864
               

               
Cow position:
               
chr18:42675593-42674742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
859
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 55
               

               
Conread position:
               
19-864
               

               
Cow position:
               
chr18:42791445-42792299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 90
               

               
Conread position:
               
19-864
               

               
Cow position:
               
chr18:50049250-50048392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
19-864
               

               
Cow position:
               
chr18:56248180-56247326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 19
               

               
Conread position:
               
20-377
               

               
Cow position:
               
chr18:43168190-43168547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
240, 233
               

               
Conread position:
               
20-385
               

               
Cow position:
               
chr18:56267480-56267117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
173, 7
               

               
Conread position:
               
20-467
               

               
Cow position:
               
chr18:44397957-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 134
               

               
Conread position:
               
20-500
               

               
Cow position:
               
chr18:52012046-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 224
               

               
Conread position:
               
20-511
               

               
Cow position:
               
chr18:40086118-40085634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
20-561
               

               
Cow position:
               
chr18:43175042-43174501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 163
               

               
Conread position:
               
20-585
               

               
Cow position:
               
chr18:50271607-50272171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
405, 412
               

               
Conread position:
               
20-586
               

               
Cow position:
               
chr18:41198141-41198707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
20-604
               

               
Cow position:
               
chr18:41948866-41948284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 159
               

               
Conread position:
               
20-618
               

               
Cow position:
               
chr18:55008789-55009385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
20-627
               

               
Cow position:
               
chr18:50246223-50246830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 65
               

               
Conread position:
               
20-628
               

               
Cow position:
               
chr18:40086368-40085770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 161
               

               
Conread position:
               
20-629
               

               
Cow position:
               
chr18:52428367-52428976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
20-629
               

               
Cow position:
               
chr18:52433548-52434157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
20-633
               

               
Cow position:
               
chr18:50048993-50048380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
20-837
               

               
Cow position:
               
chr18:51812822-51811996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
830
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 228
               

               
Conread position:
               
20-843
               

               
Cow position:
               
chr18:56128182-56129015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
838
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 249
               

               
Conread position:
               
20-859
               

               
Cow position:
               
chr18:52427779-52428627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 328
               

               
Conread position:
               
20-859
               

               
Cow position:
               
chr18:52427947-52428795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 162
               

               
Conread position:
               
20-859
               

               
Cow position:
               
chr18:52433128-52433976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
853
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 155
               

               
Conread position:
               
20-860
               

               
Cow position:
               
chr18:44239987-44240836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
853
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 157
               

               
Conread position:
               
20-860
               

               
Cow position:
               
chr18:56128099-56128948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
613, 841
               

               
Conread position:
               
20-861
               

               
Cow position:
               
chr18:42985582-42984732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
860
               

               
Alignm identity:
               
562
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
20-864
               

               
Cow position:
               
chr18:51789663-51788810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
628, 0
               

               
Conread position:
               
21-252
               

               
Cow position:
               
chr18:51765179-51764948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-418
               

               
Cow position:
               
chr18:51367616-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 84
               

               
Conread position:
               
21-503
               

               
Cow position:
               
chr18:50083765-50084247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 163
               

               
Conread position:
               
21-860
               

               
Cow position:
               
chr18:42791867-42792715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
614, 637
               

               
Conread position:
               
21-861
               

               
Cow position:
               
chr18:49022206-49023054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
858
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
21-861
               

               
Cow position:
               
chr18:55523373-55524220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
858
               

               
Alignm identity:
               
534
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
22-220
               

               
Cow position:
               
chr18:43053395-43053197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
22-390
               

               
Cow position:
               
chr18:1418234-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
234, 225
               

               
Conread position:
               
22-397
               

               
Cow position:
               
chr18:51839161-51838786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
22-468
               

               
Cow position:
               
chr18:42693396-42692950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 78
               

               
Conread position:
               
22-559
               

               
Cow position:
               
chr18:14454040-14453503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 39
               

               
Conread position:
               
22-586
               

               
Cow position:
               
chr18:50250982-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 82
               

               
Conread position:
               
22-625
               

               
Cow position:
               
chr18:42693984-42693381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 82
               

               
Conread position:
               
22-831
               

               
Cow position:
               
chr18:42791112-42791930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
823
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 80
               

               
Conread position:
               
22-861
               

               
Cow position:
               
chr18:42693816-42692968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
860
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 72
               

               
Conread position:
               
22-861
               

               
Cow position:
               
chr18:43023091-43022243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
611, 633
               

               
Conread position:
               
23-215
               

               
Cow position:
               
chr18:42837283-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-294
               

               
Cow position:
               
chr18:42984739-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
146, 154
               

               
Conread position:
               
23-294
               

               
Cow position:
               
chr18:43022250-43021979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-294
               

               
Cow position:
               
chr18:44240578-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-310
               

               
Cow position:
               
chr18:14453139-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-324
               

               
Cow position:
               
chr18:42792625-42792926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
151, 143
               

               
Conread position:
               
23-324
               

               
Cow position:
               
chr18:50021660-50021361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
276, 0
               

               
Conread position:
               
23-338
               

               
Cow position:
               
chr18:43119754-43119439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
235, 218
               

               
Conread position:
               
23-344
               

               
Cow position:
               
chr18:49032309-49031988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
234, 218
               

               
Conread position:
               
23-347
               

               
Cow position:
               
chr18:51812231-51811907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-364
               

               
Cow position:
               
chr18:43048663-43048322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-391
               

               
Cow position:
               
chr18:52448013-52448382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 154
               

               
Conread position:
               
23-416
               

               
Cow position:
               
chr18:53610066-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 223
               

               
Conread position:
               
23-450
               

               
Cow position:
               
chr18:43093185-43092760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
361, 0
               

               
Conread position:
               
23-466
               

               
Cow position:
               
chr18:42959814-42959379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
415, 70
               

               
Conread position:
               
23-467
               

               
Cow position:
               
chr18:56329282-56328838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 220
               

               
Conread position:
               
23-506
               

               
Cow position:
               
chr18:33092957-33092474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 63
               

               
Conread position:
               
23-506
               

               
Cow position:
               
chr18:50083935-50084420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
144, 155
               

               
Conread position:
               
23-509
               

               
Cow position:
               
chr18:51367698-51367212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
79, 86
               

               
Conread position:
               
23-514
               

               
Cow position:
               
chr18:51812399-51811908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-541
               

               
Cow position:
               
chr18:43168025-43168543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 221
               

               
Conread position:
               
23-541
               

               
Cow position:
               
chr18:49021632-49022151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
23-542
               

               
Cow position:
               
chr18:43093353-43092834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 161
               

               
Conread position:
               
23-554
               

               
Cow position:
               
chr18:51789156-51788626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
483, 0
               

               
Conread position:
               
23-555
               

               
Cow position:
               
chr18:51838992-51838443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 63
               

               
Conread position:
               
23-558
               

               
Cow position:
               
chr18:44398038-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 72
               

               
Conread position:
               
23-563
               

               
Cow position:
               
chr18:44184485-44183945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 223
               

               
Conread position:
               
23-569
               

               
Cow position:
               
chr18:1418067-1418613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 102
               

               
Conread position:
               
23-571
               

               
Cow position:
               
chr18:51839328-51838780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 164
               

               
Conread position:
               
23-587
               

               
Cow position:
               
chr18:51367782-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 160
               

               
Conread position:
               
23-619
               

               
Cow position:
               
chr18:42960150-42959563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 223
               

               
Conread position:
               
23-619
               

               
Cow position:
               
chr18:49032645-49032049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-625
               

               
Cow position:
               
chr18:42985075-42984473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
23-625
               

               
Cow position:
               
chr18:43022586-43021984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
23-625
               

               
Cow position:
               
chr18:44398122-44397520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 79
               

               
Conread position:
               
23-625
               

               
Cow position:
               
chr18:51367949-51367348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 140
               

               
Conread position:
               
23-627
               

               
Cow position:
               
chr18:43120174-43119570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 71
               

               
Conread position:
               
23-628
               

               
Cow position:
               
chr18:56316282-56316887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 139
               

               
Conread position:
               
23-629
               

               
Cow position:
               
chr18:41198060-41198666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-629
               

               
Cow position:
               
chr18:42960066-42959469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 0
               

               
Conread position:
               
23-629
               

               
Cow position:
               
chr18:42985159-42984553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 70
               

               
Conread position:
               
23-629
               

               
Cow position:
               
chr18:44184653-44184047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 91
               

               
Conread position:
               
23-632
               

               
Cow position:
               
chr18:42675004-42674395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 320
               

               
Conread position:
               
23-632
               

               
Cow position:
               
chr18:44253658-44253063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
406, 274
               

               
Conread position:
               
23-633
               

               
Cow position:
               
chr18:40306738-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
23-633
               

               
Cow position:
               
chr18:43093521-43092911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 155
               

               
Conread position:
               
23-633
               

               
Cow position:
               
chr18:43120258-43119648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 223
               

               
Conread position:
               
23-633
               

               
Cow position:
               
chr18:50099544-50100154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 161
               

               
Conread position:
               
23-633
               

               
Cow position:
               
chr18:51367865-51367256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 56
               

               
Conread position:
               
23-789
               

               
Cow position:
               
chr18:42744568-42743793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
493, 504
               

               
Conread position:
               
23-791
               

               
Cow position:
               
chr18:42837871-42837094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
506, 499
               

               
Conread position:
               
23-793
               

               
Cow position:
               
chr18:53559991-53560770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
787
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
23-798
               

               
Cow position:
               
chr18:41197976-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 218
               

               
Conread position:
               
23-799
               

               
Cow position:
               
chr18:1417815-1418600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
787
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
488, 482
               

               
Conread position:
               
23-808
               

               
Cow position:
               
chr18:52428202-52428996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
799
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 159
               

               
Conread position:
               
23-809
               

               
Cow position:
               
chr18:43175291-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
801
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
400, 422
               

               
Conread position:
               
23-825
               

               
Cow position:
               
chr18:33064537-33063726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
815
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 336
               

               
Conread position:
               
23-825
               

               
Cow position:
               
chr18:51812987-51812176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
814
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
612, 688
               

               
Conread position:
               
23-829
               

               
Cow position:
               
chr18:40306318-40307133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
608, 746
               

               
Conread position:
               
23-829
               

               
Cow position:
               
chr18:56330038-56329223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
817
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
600, 688
               

               
Conread position:
               
23-830
               

               
Cow position:
               
chr18:50099292-50100108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
822
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 162
               

               
Conread position:
               
23-832
               

               
Cow position:
               
chr18:50099712-50100517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
822
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 80
               

               
Conread position:
               
23-837
               

               
Cow position:
               
chr18:50848484-50849307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
829
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 338
               

               
Conread position:
               
23-848
               

               
Cow position:
               
chr18:51368117-51367284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
838
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 217
               

               
Conread position:
               
23-849
               

               
Cow position:
               
chr18:44184905-44184070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
841
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 64
               

               
Conread position:
               
23-859
               

               
Cow position:
               
chr18:52427614-52428459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
850
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 64
               

               
Conread position:
               
23-859
               

               
Cow position:
               
chr18:52432963-52433808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 64
               

               
Conread position:
               
23-860
               

               
Cow position:
               
chr18:42744652-42743806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
506, 499
               

               
Conread position:
               
23-860
               

               
Cow position:
               
chr18:49022461-49023305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
852
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
469, 135
               

               
Conread position:
               
23-860
               

               
Cow position:
               
chr18:52447173-52448019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
852
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
23-860
               

               
Cow position:
               
chr18:53636063-53635217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 241
               

               
Conread position:
               
23-861
               

               
Cow position:
               
chr18:42985495-42984648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
856
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 81
               

               
Conread position:
               
23-861
               

               
Cow position:
               
chr18:49033317-49032470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
601, 688
               

               
Conread position:
               
23-861
               

               
Cow position:
               
chr18:52447509-52448357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 153
               

               
Conread position:
               
23-861
               

               
Cow position:
               
chr18:56329870-56329023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
850
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
610, 670
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:41197556-41198406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
588, 670
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:41949283-41948433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
852
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
610, 688
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:42675340-42674490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
855
               

               
Alignm identity:
               
569
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 231
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:42790945-42791795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
856
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 156
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:42791533-42792383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
852
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
612, 688
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:42960480-42959645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
850
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 100
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:42985411-42984561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 93
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:43022838-43021988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
855
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 80
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:43175459-43174609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
551
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 94
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:43175543-43174693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
856
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 93
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:44154302-44153471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 75
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:44239906-44240756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
855
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:50059306-50058458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
855
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 406
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:51368453-51367604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
852
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
608, 743
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:52433215-52434065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
853
               

               
Alignm identity:
               
544
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:52447341-52448191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
853
               

               
Alignm identity:
               
553
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
612, 688
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:52447425-52448275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
853
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 154
               

               
Conread position:
               
23-864
               

               
Cow position:
               
chr18:56128354-56129203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
853
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 234
               

               
Conread position:
               
24-327
               

               
Cow position:
               
chr18:52448098-52448403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
24-338
               

               
Cow position:
               
chr18:51765260-51764946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
236, 222
               

               
Conread position:
               
24-364
               

               
Cow position:
               
chr18:53498626-53498967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
97, 88
               

               
Conread position:
               
24-373
               

               
Cow position:
               
chr18:55497388-55497039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-394
               

               
Cow position:
               
chr18:14453222-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 224
               

               
Conread position:
               
24-398
               

               
Cow position:
               
chr18:55066708-55066334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
24-418
               

               
Cow position:
               
chr18:51751933-51751538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
240, 230
               

               
Conread position:
               
24-422
               

               
Cow position:
               
chr18:51969657-51970046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
230, 147
               

               
Conread position:
               
24-426
               

               
Cow position:
               
chr18:42827554-42827961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
232, 224
               

               
Conread position:
               
24-457
               

               
Cow position:
               
chr18:44240411-44240844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 152
               

               
Conread position:
               
24-460
               

               
Cow position:
               
chr18:49022880-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
24-475
               

               
Cow position:
               
chr18:33064032-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
24-481
               

               
Cow position:
               
chr18:52433720-52434177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-495
               

               
Cow position:
               
chr18:53610149-53609679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 249
               

               
Conread position:
               
24-518
               

               
Cow position:
               
chr18:42724438-42723943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
66, 91
               

               
Conread position:
               
24-542
               

               
Cow position:
               
chr18:42984990-42984472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 81
               

               
Conread position:
               
24-542
               

               
Cow position:
               
chr18:43022501-43021983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-548
               

               
Cow position:
               
chr18:56329365-56328841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-554
               

               
Cow position:
               
chr18:51752269-51751739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
24-556
               

               
Cow position:
               
chr18:40086198-40085673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 148
               

               
Conread position:
               
24-568
               

               
Cow position:
               
chr18:55523794-55524338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
24-587
               

               
Cow position:
               
chr18:51752185-51751622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
24-588
               

               
Cow position:
               
chr18:51812482-51811918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-589
               

               
Cow position:
               
chr18:33092872-33092313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 230
               

               
Conread position:
               
24-589
               

               
Cow position:
               
chr18:51839411-51838846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 160
               

               
Conread position:
               
24-589
               

               
Cow position:
               
chr18:51969491-51970045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 63
               

               
Conread position:
               
24-593
               

               
Cow position:
               
chr18:51838720-51838162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
153, 131
               

               
Conread position:
               
24-594
               

               
Cow position:
               
chr18:51765932-51765362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
400, 413
               

               
Conread position:
               
24-605
               

               
Cow position:
               
chr18:42959981-42959409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
543, 230
               

               
Conread position:
               
24-613
               

               
Cow position:
               
chr18:49032560-49031971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 181
               

               
Conread position:
               
24-618
               

               
Cow position:
               
chr18:55066960-55066366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 87
               

               
Conread position:
               
24-625
               

               
Cow position:
               
chr18:51874045-51874639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
24-627
               

               
Cow position:
               
chr18:33064200-33063597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 62
               

               
Conread position:
               
24-627
               

               
Cow position:
               
chr18:56316367-56316970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 384
               

               
Conread position:
               
24-628
               

               
Cow position:
               
chr18:51789323-51788719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 79
               

               
Conread position:
               
24-628
               

               
Cow position:
               
chr18:51812566-51811962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
24-629
               

               
Cow position:
               
chr18:51400598-51401203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 81
               

               
Conread position:
               
24-629
               

               
Cow position:
               
chr18:52428287-52428892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
24-629
               

               
Cow position:
               
chr18:52433468-52434073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 74
               

               
Conread position:
               
24-629
               

               
Cow position:
               
chr18:53610317-53609712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 240
               

               
Conread position:
               
24-629
               

               
Cow position:
               
chr18:56316115-56316720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-633
               

               
Cow position:
               
chr18:40306655-40307264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 233
               

               
Conread position:
               
24-633
               

               
Cow position:
               
chr18:40324650-40324041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
24-633
               

               
Cow position:
               
chr18:50083600-50084209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
24-633
               

               
Cow position:
               
chr18:50246143-50246752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
24-633
               

               
Cow position:
               
chr18:50271443-50272052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
24-633
               

               
Cow position:
               
chr18:50271527-50272136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
24-633
               

               
Cow position:
               
chr18:51765596-51764987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
24-633
               

               
Cow position:
               
chr18:51765680-51765071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 161
               

               
Conread position:
               
24-633
               

               
Cow position:
               
chr18:54993138-54993747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 330
               

               
Conread position:
               
24-633
               

               
Cow position:
               
chr18:55067044-55066435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
400, 412
               

               
Conread position:
               
24-798
               

               
Cow position:
               
chr18:43167774-43168555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
785
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
611, 687
               

               
Conread position:
               
24-826
               

               
Cow position:
               
chr18:52012377-52011566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
817
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 79
               

               
Conread position:
               
24-828
               

               
Cow position:
               
chr18:44253741-44252942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
576, 352
               

               
Conread position:
               
24-828
               

               
Cow position:
               
chr18:51368621-51367807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
816
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 688
               

               
Conread position:
               
24-830
               

               
Cow position:
               
chr18:56128439-56129253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
616, 692
               

               
Conread position:
               
24-833
               

               
Cow position:
               
chr18:43093604-43092787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
822
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 79
               

               
Conread position:
               
24-834
               

               
Cow position:
               
chr18:51969173-51969963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
819
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
504, 63
               

               
Conread position:
               
24-841
               

               
Cow position:
               
chr18:51789827-51789001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
830
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 150
               

               
Conread position:
               
24-852
               

               
Cow position:
               
chr18:40306235-40307072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
841
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
400, 420
               

               
Conread position:
               
24-854
               

               
Cow position:
               
chr18:41949114-41948277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
841
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
611, 687
               

               
Conread position:
               
24-859
               

               
Cow position:
               
chr18:42693898-42693055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
852
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
24-859
               

               
Cow position:
               
chr18:56128271-56129115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 71
               

               
Conread position:
               
24-861
               

               
Cow position:
               
chr18:33064452-33063606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
414, 421
               

               
Conread position:
               
24-861
               

               
Cow position:
               
chr18:44239823-44240669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
852
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 403
               

               
Conread position:
               
24-861
               

               
Cow position:
               
chr18:49033148-49032302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
852
               

               
Alignm identity:
               
569
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 154
               

               
Conread position:
               
24-861
               

               
Cow position:
               
chr18:50245723-50246569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
859
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 159
               

               
Conread position:
               
24-861
               

               
Cow position:
               
chr18:51789575-51788729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 89
               

               
Conread position:
               
24-861
               

               
Cow position:
               
chr18:53498035-53498887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 97
               

               
Conread position:
               
24-862
               

               
Cow position:
               
chr18:51368200-51367354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
852
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 152
               

               
Conread position:
               
24-864
               

               
Cow position:
               
chr18:14453954-14453129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
843
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
415, 420
               

               
Conread position:
               
24-864
               

               
Cow position:
               
chr18:42791366-42792215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 217
               

               
Conread position:
               
24-864
               

               
Cow position:
               
chr18:42985326-42984477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
856
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 64
               

               
Conread position:
               
24-864
               

               
Cow position:
               
chr18:44398373-44397524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
853
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
492, 502
               

               
Conread position:
               
24-864
               

               
Cow position:
               
chr18:50059389-50058540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
855
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 84
               

               
Conread position:
               
24-864
               

               
Cow position:
               
chr18:52428035-52428884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
854
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
24-864
               

               
Cow position:
               
chr18:53559824-53560673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
25-581
               

               
Cow position:
               
chr18:56433535-56434089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
163, 104
               

               
Conread position:
               
25-864
               

               
Cow position:
               
chr18:50059556-50058708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 145
               

               
Conread position:
               
26-819
               

               
Cow position:
               
chr18:44154470-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
806
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 405
               

               
Conread position:
               
26-847
               

               
Cow position:
               
chr18:51400264-51401094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
833
               

               
Alignm identity:
               
540
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 236
               

               
Conread position:
               
26-864
               

               
Cow position:
               
chr18:42960315-42959477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
850
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
403, 398
               

               
Conread position:
               
27-628
               

               
Cow position:
               
chr18:42694063-42693462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 77
               

               
Conread position:
               
27-860
               

               
Cow position:
               
chr18:49033397-49032555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
847
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 70
               

               
Conread position:
               
28-533
               

               
Cow position:
               
chr18:56316539-56317044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
28-864
               

               
Cow position:
               
chr18:44398453-44397608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
847
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
618, 674
               

               
Conread position:
               
35-459
               

               
Cow position:
               
chr18:51765333-51764909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
136, 147
               

               
Conread position:
               
35-511
               

               
Cow position:
               
chr18:51765417-51764941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 86
               

               
Conread position:
               
35-626
               

               
Cow position:
               
chr18:53498304-53498895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 145
               

               
Conread position:
               
36-461
               

               
Cow position:
               
chr18:14453294-14452869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 25
               

               
Conread position:
               
36-633
               

               
Cow position:
               
chr18:44184556-44183959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 135
               

               
Conread position:
               
36-829
               

               
Cow position:
               
chr18:43094000-43093209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
808
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 134
               

               
Conread position:
               
36-860
               

               
Cow position:
               
chr18:50848161-50848994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
836
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 80
               

               
Conread position:
               
36-864
               

               
Cow position:
               
chr18:44253813-44252990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
840
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
597, 423
               

               
Conread position:
               
37-625
               

               
Cow position:
               
chr18:56247821-56247238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 307
               

               
Conread position:
               
37-831
               

               
Cow position:
               
chr18:40306164-40306967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
809
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 144
               

               
Conread position:
               
37-864
               

               
Cow position:
               
chr18:33065027-33064191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
841
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 85
               

               
Conread position:
               
40-831
               

               
Cow position:
               
chr18:54993068-54993870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
807
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 545
               

               
Conread position:
               
42-634
               

               
Cow position:
               
chr18:53509236-53509830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
42-832
               

               
Cow position:
               
chr18:53525690-53526488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
808
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
42-864
               

               
Cow position:
               
chr18:51789893-51789062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
837
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
43-478
               

               
Cow position:
               
chr18:54968121-54968559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 200
               

               
Conread position:
               
43-546
               

               
Cow position:
               
chr18:54968037-54968542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
43-568
               

               
Cow position:
               
chr18:53586412-53585885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 427
               

               
Conread position:
               
43-569
               

               
Cow position:
               
chr18:55018383-55018910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
10, 221
               

               
Conread position:
               
43-581
               

               
Cow position:
               
chr18:22634639-22635179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 145
               

               
Conread position:
               
43-633
               

               
Cow position:
               
chr18:54967787-54968377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 244
               

               
Conread position:
               
43-633
               

               
Cow position:
               
chr18:54993491-54994080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 226
               

               
Conread position:
               
43-651
               

               
Cow position:
               
chr18:53498220-53498833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 229
               

               
Conread position:
               
43-793
               

               
Cow position:
               
chr18:54979979-54980737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 404
               

               
Conread position:
               
43-824
               

               
Cow position:
               
chr18:53559757-53560549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
799
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 223
               

               
Conread position:
               
43-859
               

               
Cow position:
               
chr18:54967454-54968276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
830
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 233
               

               
Conread position:
               
43-861
               

               
Cow position:
               
chr18:53587084-53586255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
833
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
44-471
               

               
Cow position:
               
chr18:55497452-55497026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
216, 202
               

               
Conread position:
               
44-534
               

               
Cow position:
               
chr18:55497536-55497046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 136
               

               
Conread position:
               
44-541
               

               
Cow position:
               
chr18:49022814-49023313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
44-584
               

               
Cow position:
               
chr18:53610213-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 202
               

               
Conread position:
               
44-588
               

               
Cow position:
               
chr18:50246331-50246872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 139
               

               
Conread position:
               
44-588
               

               
Cow position:
               
chr18:53635538-53634994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
518, 503
               

               
Conread position:
               
44-629
               

               
Cow position:
               
chr18:54967956-54968541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 74
               

               
Conread position:
               
44-633
               

               
Cow position:
               
chr18:53586661-53586072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
44-633
               

               
Cow position:
               
chr18:53610381-53609792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 202
               

               
Conread position:
               
44-831
               

               
Cow position:
               
chr18:53636126-53635330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
44-831
               

               
Cow position:
               
chr18:56128039-56128835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
44-837
               

               
Cow position:
               
chr18:51766080-51765278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
810
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
44-861
               

               
Cow position:
               
chr18:49033044-49032218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
828
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
591, 811
               

               
Conread position:
               
45-409
               

               
Cow position:
               
chr18:49021738-49022103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
42, 54
               

               
Conread position:
               
45-472
               

               
Cow position:
               
chr18:56391260-56390833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
46, 56
               

               
Conread position:
               
45-541
               

               
Cow position:
               
chr18:43048725-43048231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 198
               

               
Conread position:
               
45-546
               

               
Cow position:
               
chr18:55066855-55066354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
45-563
               

               
Cow position:
               
chr18:42827407-42827925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
45-584
               

               
Cow position:
               
chr18:52012104-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
378, 383
               

               
Conread position:
               
45-589
               

               
Cow position:
               
chr18:51838783-51838244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
304, 192
               

               
Conread position:
               
45-598
               

               
Cow position:
               
chr18:49022733-49023286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
45-630
               

               
Cow position:
               
chr18:50281761-50282344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 16
               

               
Conread position:
               
45-633
               

               
Cow position:
               
chr18:51839474-51838886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
45-633
               

               
Cow position:
               
chr18:53509325-53509913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 132
               

               
Conread position:
               
45-633
               

               
Cow position:
               
chr18:55523647-55524235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 210
               

               
Conread position:
               
45-661
               

               
Cow position:
               
chr18:56247726-56247114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
590, 236
               

               
Conread position:
               
45-830
               

               
Cow position:
               
chr18:33065103-33064309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
803
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
45-831
               

               
Cow position:
               
chr18:40324713-40323919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
799
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 193
               

               
Conread position:
               
45-858
               

               
Cow position:
               
chr18:42744714-42743892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
825
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 198
               

               
Conread position:
               
45-859
               

               
Cow position:
               
chr18:52432901-52433724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
826
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
45-860
               

               
Cow position:
               
chr18:41949345-41948521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
826
               

               
Alignm identity:
               
544
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
471, 484
               

               
Conread position:
               
45-860
               

               
Cow position:
               
chr18:52427552-52428376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
831
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
45-861
               

               
Cow position:
               
chr18:44154364-44153558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
828
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
45-861
               

               
Cow position:
               
chr18:44239760-44240585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
833
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 139
               

               
Conread position:
               
45-861
               

               
Cow position:
               
chr18:50059620-50058795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
831
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 289
               

               
Conread position:
               
45-861
               

               
Cow position:
               
chr18:53635705-53634882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
830
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
588, 657
               

               
Conread position:
               
45-864
               

               
Cow position:
               
chr18:40324881-40324053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
830
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
471, 484
               

               
Conread position:
               
45-864
               

               
Cow position:
               
chr18:50245996-50246824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
835
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 50
               

               
Conread position:
               
45-864
               

               
Cow position:
               
chr18:52012439-52011612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
831
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 16
               

               
Conread position:
               
46-628
               

               
Cow position:
               
chr18:42724584-42724002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
75, 70
               

               
Conread position:
               
46-831
               

               
Cow position:
               
chr18:43120319-43119525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 306
               

               
Conread position:
               
46-859
               

               
Cow position:
               
chr18:52447028-52447850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
824
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
594, 665
               

               
Conread position:
               
46-864
               

               
Cow position:
               
chr18:43175352-43174525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
833
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 70
               

               
Conread position:
               
46-864
               

               
Cow position:
               
chr18:44253887-44253074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
827
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 59
               

               
Conread position:
               
47-471
               

               
Cow position:
               
chr18:42724331-42723907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
213, 207
               

               
Conread position:
               
47-586
               

               
Cow position:
               
chr18:33093101-33092562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
47-633
               

               
Cow position:
               
chr18:55497617-55497031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 217
               

               
Conread position:
               
47-859
               

               
Cow position:
               
chr18:52427722-52428543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
825
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 375
               

               
Conread position:
               
47-859
               

               
Cow position:
               
chr18:52446945-52447766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
824
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
594, 664
               

               
Conread position:
               
48-625
               

               
Cow position:
               
chr18:49021492-49022066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
48-864
               

               
Cow position:
               
chr18:43093664-43092839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
828
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 132
               

               
Conread position:
               
51-627
               

               
Cow position:
               
chr18:56391422-56390846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
122, 133
               

               
Conread position:
               
51-628
               

               
Cow position:
               
chr18:56391590-56391013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
51-859
               

               
Cow position:
               
chr18:53610542-53609725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
462, 454
               

               
Conread position:
               
51-864
               

               
Cow position:
               
chr18:41197500-41198322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
827
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 53
               

               
Conread position:
               
51-864
               

               
Cow position:
               
chr18:51813044-51812221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
827
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 128
               

               
Conread position:
               
53-591
               

               
Cow position:
               
chr18:56391504-56390966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
206, 216
               

               
Conread position:
               
53-613
               

               
Cow position:
               
chr18:55497695-55497135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
55-861
               

               
Cow position:
               
chr18:42694203-42693388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
826
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 49
               

               
Conread position:
               
56-748
               

               
Cow position:
               
chr18:51839547-51838846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 122
               

               
Conread position:
               
56-801
               

               
Cow position:
               
chr18:55067096-55066343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 197
               

               
Conread position:
               
56-831
               

               
Cow position:
               
chr18:53559688-53560472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
788
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 208
               

               
Conread position:
               
57-628
               

               
Cow position:
               
chr18:56493943-56494514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
57-745
               

               
Cow position:
               
chr18:51969356-51970043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 114
               

               
Conread position:
               
57-841
               

               
Cow position:
               
chr18:53497987-53498780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
804
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
57-854
               

               
Cow position:
               
chr18:51752319-51751512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
816
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
57-856
               

               
Cow position:
               
chr18:56316064-56316872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
815
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 46
               

               
Conread position:
               
57-859
               

               
Cow position:
               
chr18:43175593-43174782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
817
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 121
               

               
Conread position:
               
57-861
               

               
Cow position:
               
chr18:49021081-49021891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
824
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
170, 217
               

               
Conread position:
               
58-611
               

               
Cow position:
               
chr18:51874158-51874709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
58-633
               

               
Cow position:
               
chr18:56433987-56434552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
59-633
               

               
Cow position:
               
chr18:53586562-53585988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
60-587
               

               
Cow position:
               
chr18:51765476-51764949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
60-635
               

               
Cow position:
               
chr18:56493775-56494353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
60-861
               

               
Cow position:
               
chr18:50848353-50849163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
814
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
62-864
               

               
Cow position:
               
chr18:42675385-42674574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
815
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 186
               

               
Conread position:
               
64-864
               

               
Cow position:
               
chr18:43093729-43092923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
812
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
571, 52
               

               
Conread position:
               
65-830
               

               
Cow position:
               
chr18:56434152-56434926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
212, 199
               

               
Conread position:
               
65-863
               

               
Cow position:
               
chr18:53586976-53586169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
814
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
65-864
               

               
Cow position:
               
chr18:50083305-50084113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
812
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 100
               

               
Conread position:
               
66-310
               

               
Cow position:
               
chr18:43053435-43053191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
66-601
               

               
Cow position:
               
chr18:53586471-53585937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
505, 0
               

               
Conread position:
               
66-633
               

               
Cow position:
               
chr18:56493868-56494435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 368
               

               
Conread position:
               
67-628
               

               
Cow position:
               
chr18:44254030-44253473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 131
               

               
Conread position:
               
69-633
               

               
Cow position:
               
chr18:50022376-50021809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
101, 110
               

               
Conread position:
               
92-857
               

               
Cow position:
               
chr18:53587372-53586595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
93-798
               

               
Cow position:
               
chr18:50281641-50282355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
98-633
               

               
Cow position:
               
chr18:54966923-54967458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
98-860
               

               
Cow position:
               
chr18:54979448-54980219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
243, 253
               

               
Conread position:
               
98-863
               

               
Cow position:
               
chr18:54992708-54993482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 82
               

               
Conread position:
               
99-627
               

               
Cow position:
               
chr18:50031093-50030563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 160
               

               
Conread position:
               
99-628
               

               
Cow position:
               
chr18:42724615-42724086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
93, 81
               

               
Conread position:
               
99-861
               

               
Cow position:
               
chr18:44184913-44184142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
774
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 158
               

               
Conread position:
               
99-864
               

               
Cow position:
               
chr18:42837963-42837189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
417, 430
               

               
Conread position:
               
102-559
               

               
Cow position:
               
chr18:14453312-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 146
               

               
Conread position:
               
104-861
               

               
Cow position:
               
chr18:55008455-55009219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
774
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 76
               

               
Conread position:
               
104-864
               

               
Cow position:
               
chr18:42790942-42791711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
773
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
531, 570
               

               
Conread position:
               
106-825
               

               
Cow position:
               
chr18:50245721-50246449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
107-464
               

               
Cow position:
               
chr18:56267479-56267121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 68
               

               
Conread position:
               
107-864
               

               
Cow position:
               
chr18:43167773-43168539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 297
               

               
Conread position:
               
108-629
               

               
Cow position:
               
chr18:55008709-55009230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 164
               

               
Conread position:
               
108-633
               

               
Cow position:
               
chr18:54967017-54967542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 337
               

               
Conread position:
               
108-829
               

               
Cow position:
               
chr18:50245975-50246705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
108-861
               

               
Cow position:
               
chr18:54967185-54967944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
108-861
               

               
Cow position:
               
chr18:55018030-55018793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
527, 666
               

               
Conread position:
               
108-864
               

               
Cow position:
               
chr18:50022508-50021737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
775
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 105
               

               
Conread position:
               
109-625
               

               
Cow position:
               
chr18:14454037-14453521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 339
               

               
Conread position:
               
109-628
               

               
Cow position:
               
chr18:56128020-56128539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 72
               

               
Conread position:
               
109-829
               

               
Cow position:
               
chr18:53636145-53635416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 72
               

               
Conread position:
               
110-864
               

               
Cow position:
               
chr18:40324900-40324137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 136
               

               
Conread position:
               
115-849
               

               
Cow position:
               
chr18:51969013-51969735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
117-829
               

               
Cow position:
               
chr18:50059632-50058911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
117-864
               

               
Cow position:
               
chr18:40086945-40086189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 171
               

               
Conread position:
               
118-831
               

               
Cow position:
               
chr18:51969333-51970044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
491, 281
               

               
Conread position:
               
119-491
               

               
Cow position:
               
chr18:44153636-44153267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
235, 60
               

               
Conread position:
               
119-590
               

               
Cow position:
               
chr18:56434458-56434928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
313, 307
               

               
Conread position:
               
119-616
               

               
Cow position:
               
chr18:43048735-43048240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
430, 415
               

               
Conread position:
               
119-619
               

               
Cow position:
               
chr18:22634633-22635133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
136, 150
               

               
Conread position:
               
119-633
               

               
Cow position:
               
chr18:54967697-54968209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 46
               

               
Conread position:
               
119-831
               

               
Cow position:
               
chr18:56433793-56434507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
100, 153
               

               
Conread position:
               
119-860
               

               
Cow position:
               
chr18:44239750-44240500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 53
               

               
Conread position:
               
119-861
               

               
Cow position:
               
chr18:55017789-55018540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 147
               

               
Conread position:
               
119-862
               

               
Cow position:
               
chr18:53509231-53509983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 141
               

               
Conread position:
               
119-862
               

               
Cow position:
               
chr18:53525685-53526437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 141
               

               
Conread position:
               
119-864
               

               
Cow position:
               
chr18:43120330-43119576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 53
               

               
Conread position:
               
119-864
               

               
Cow position:
               
chr18:52446933-52447687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
521, 588
               

               
Conread position:
               
120-633
               

               
Cow position:
               
chr18:51766087-51765575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
120-863
               

               
Cow position:
               
chr18:55067116-55066364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
121-864
               

               
Cow position:
               
chr18:42744722-42743970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 133
               

               
Conread position:
               
123-830
               

               
Cow position:
               
chr18:56248239-56247520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
123-864
               

               
Cow position:
               
chr18:41949351-41948601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 403
               

               
Conread position:
               
123-864
               

               
Cow position:
               
chr18:44253894-44253157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
524, 510
               

               
Conread position:
               
124-625
               

               
Cow position:
               
chr18:42827402-42827903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
464, 475
               

               
Conread position:
               
124-830
               

               
Cow position:
               
chr18:56316047-56316761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 117
               

               
Conread position:
               
125-829
               

               
Cow position:
               
chr18:56247815-56247111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 196
               

               
Conread position:
               
125-859
               

               
Cow position:
               
chr18:52427548-52428291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 302
               

               
Conread position:
               
125-859
               

               
Cow position:
               
chr18:52432897-52433640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 302
               

               
Conread position:
               
127-842
               

               
Cow position:
               
chr18:44254054-44253335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
401, 156
               

               
Conread position:
               
129-587
               

               
Cow position:
               
chr18:50250922-50251376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
138, 52
               

               
Conread position:
               
131-628
               

               
Cow position:
               
chr18:33093101-33092604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 135
               

               
Conread position:
               
138-628
               

               
Cow position:
               
chr18:55497694-55497204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
130, 126
               

               
Conread position:
               
138-864
               

               
Cow position:
               
chr18:53559686-53560421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 296
               

               
Conread position:
               
144-861
               

               
Cow position:
               
chr18:50083300-50084026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 103
               

               
Conread position:
               
153-628
               

               
Cow position:
               
chr18:56433495-56433969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
206, 144
               

               
Conread position:
               
154-830
               

               
Cow position:
               
chr18:50098919-50099605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
436, 449
               

               
Conread position:
               
159-831
               

               
Cow position:
               
chr18:50059674-50058993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 271
               

               
Conread position:
               
174-422
               

               
Cow position:
               
chr18:55075136-55075385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
79, 94
               

               
Conread position:
               
181-859
               

               
Cow position:
               
chr18:52446911-52447598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 163
               

               
Conread position:
               
182-861
               

               
Cow position:
               
chr18:43167512-43168200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
446, 529
               

               
Conread position:
               
183-864
               

               
Cow position:
               
chr18:53587110-53586420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
447, 578
               

               
Conread position:
               
192-628
               

               
Cow position:
               
chr18:42724774-42724338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
193-864
               

               
Cow position:
               
chr18:43094094-43093427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 61
               

               
Conread position:
               
195-561
               

               
Cow position:
               
chr18:53571964-53572317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
195-629
               

               
Cow position:
               
chr18:22634625-22635059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
229, 238
               

               
Conread position:
               
195-861
               

               
Cow position:
               
chr18:43175698-43175032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 105
               

               
Conread position:
               
195-864
               

               
Cow position:
               
chr18:42985575-42984897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 324
               

               
Conread position:
               
195-864
               

               
Cow position:
               
chr18:43120338-43119660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 53
               

               
Conread position:
               
197-554
               

               
Cow position:
               
chr18:56267472-56267116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
198-544
               

               
Cow position:
               
chr18:51873689-51874035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
198-616
               

               
Cow position:
               
chr18:43048740-43048322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
198-861
               

               
Cow position:
               
chr18:41949360-41948688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
198-864
               

               
Cow position:
               
chr18:43167612-43168287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
101, 84
               

               
Conread position:
               
200-864
               

               
Cow position:
               
chr18:42744727-42744054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
424, 511
               

               
Conread position:
               
201-864
               

               
Cow position:
               
chr18:50848077-50848746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
202-632
               

               
Cow position:
               
chr18:14453296-14452866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
202-840
               

               
Cow position:
               
chr18:55523300-55523947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
221, 232
               

               
Conread position:
               
202-861
               

               
Cow position:
               
chr18:53497964-53498632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 58
               

               
Conread position:
               
203-857
               

               
Cow position:
               
chr18:54979469-54980132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
203-862
               

               
Cow position:
               
chr18:49021728-49022385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
316, 310
               

               
Conread position:
               
203-864
               

               
Cow position:
               
chr18:50295183-50295851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 30
               

               
Conread position:
               
204-864
               

               
Cow position:
               
chr18:51969018-51969666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
83, 10
               

               
Conread position:
               
205-503
               

               
Cow position:
               
chr18:55568670-55568378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 51
               

               
Conread position:
               
206-862
               

               
Cow position:
               
chr18:33065110-33064445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
207-864
               

               
Cow position:
               
chr18:42960545-42959888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
208, 45
               

               
Conread position:
               
208-633
               

               
Cow position:
               
chr18:42827402-42827827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
209-861
               

               
Cow position:
               
chr18:40324966-40324308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 85
               

               
Conread position:
               
210-628
               

               
Cow position:
               
chr18:42724840-42724422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
229, 214
               

               
Conread position:
               
211-476
               

               
Cow position:
               
chr18:43053456-43053193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
216-633
               

               
Cow position:
               
chr18:33093100-33092683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 52
               

               
Conread position:
               
222-864
               

               
Cow position:
               
chr18:49022240-49022889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 338
               

               
Conread position:
               
225-629
               

               
Cow position:
               
chr18:55497691-55497287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
227-858
               

               
Cow position:
               
chr18:51400297-51400937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 295
               

               
Conread position:
               
234-532
               

               
Cow position:
               
chr18:55075112-55075411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
166, 201
               

               
Conread position:
               
235-617
               

               
Cow position:
               
chr18:53571836-53572207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
241-862
               

               
Cow position:
               
chr18:51368656-51368025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 282
               

               
Conread position:
               
265-629
               

               
Cow position:
               
chr18:49021622-49021986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 54
               

               
Conread position:
               
265-633
               

               
Cow position:
               
chr18:54979447-54979815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
265-864
               

               
Cow position:
               
chr18:54992707-54993315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
375, 415
               

               
Conread position:
               
267-859
               

               
Cow position:
               
chr18:50271434-50272035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
168, 158
               

               
Conread position:
               
267-864
               

               
Cow position:
               
chr18:44239730-44240336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 259
               

               
Conread position:
               
270-864
               

               
Cow position:
               
chr18:44398463-44397860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
273-561
               

               
Cow position:
               
chr18:43053480-43053192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
276-835
               

               
Cow position:
               
chr18:55017778-55018346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
93, 109
               

               
Conread position:
               
278-864
               

               
Cow position:
               
chr18:49033398-49032803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
279-628
               

               
Cow position:
               
chr18:50031081-50030733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
282, 142
               

               
Conread position:
               
279-831
               

               
Cow position:
               
chr18:53509224-53509784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 7
               

               
Conread position:
               
279-831
               

               
Cow position:
               
chr18:53525678-53526238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 7
               

               
Conread position:
               
280-633
               

               
Cow position:
               
chr18:42827390-42827743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
138, 150
               

               
Conread position:
               
280-859
               

               
Cow position:
               
chr18:52432884-52433472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
351, 427
               

               
Conread position:
               
280-860
               

               
Cow position:
               
chr18:52427535-52428124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
351, 427
               

               
Conread position:
               
280-864
               

               
Cow position:
               
chr18:40324979-40324389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
281-660
               

               
Cow position:
               
chr18:43048741-43048364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
285-629
               

               
Cow position:
               
chr18:56248245-56247908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 21
               

               
Conread position:
               
287-633
               

               
Cow position:
               
chr18:14453295-14452949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
300-837
               

               
Cow position:
               
chr18:50083288-50083834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
335, 394
               

               
Conread position:
               
311-628
               

               
Cow position:
               
chr18:56267527-56267210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
317-589
               

               
Cow position:
               
chr18:55075111-55075384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
119, 112
               

               
Conread position:
               
317-864
               

               
Cow position:
               
chr18:51839538-51838982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
319, 394
               

               
Conread position:
               
318-864
               

               
Cow position:
               
chr18:51752311-51751756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
320-633
               

               
Cow position:
               
chr18:50031124-50030814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
352-831
               

               
Cow position:
               
chr18:50098949-50099437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
240, 253
               

               
Conread position:
               
353-864
               

               
Cow position:
               
chr18:44398464-44397944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 37
               

               
Conread position:
               
354-864
               

               
Cow position:
               
chr18:50049251-50048728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
74, 156
               

               
Conread position:
               
360-861
               

               
Cow position:
               
chr18:40074921-40075431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 64
               

               
Conread position:
               
361-842
               

               
Cow position:
               
chr18:14454037-14453547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 350
               

               
Conread position:
               
381-864
               

               
Cow position:
               
chr18:42827407-42827899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
394-864
               

               
Cow position:
               
chr18:55523324-55523803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
402-629
               

               
Cow position:
               
chr18:43053435-43053208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
403-864
               

               
Cow position:
               
chr18:42790905-42791375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
417-858
               

               
Cow position:
               
chr18:41949395-41948943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
438-864
               

               
Cow position:
               
chr18:42827381-42827815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
195, 5
               

               
Conread position:
               
454-861
               

               
Cow position:
               
chr18:55067118-55066702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
194, 243
               

               
Conread position:
               
460-856
               

               
Cow position:
               
chr18:40306167-40306572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
188, 251
               

               
Conread position:
               
467-864
               

               
Cow position:
               
chr18:33093101-33092695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
50, 62
               

               
Conread position:
               
531-860
               

               
Cow position:
               
chr18:14454035-14453697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
105, 180
               

               
Conread position:
               
531-864
               

               
Cow position:
               
chr18:44154469-44154124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 183
               

               
Conread position:
               
533-864
               

               
Cow position:
               
chr18:43048741-43048401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
694-864
               

               
Cow position:
               
chr18:14453214-14453045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
695-864
               

               
Cow position:
               
chr18:41949357-41949189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               
Show alignments to all cow chromosomes.