Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010075C11.5 |
| Conread position: | 1-864 |
| Cow position: | chr2:78754139-78754989 (view UCSC Genome Browser custom track) |
| Alignm length: | 871 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 23 |
| Conread position: | 6-633 |
| Cow position: | chr2:78755633-78756258 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 13 |
| Conread position: | 6-864 |
| Cow position: | chr2:78754879-78755741 (view UCSC Genome Browser custom track) |
| Alignm length: | 871 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 12 |
| Conread position: | 8-861 |
| Cow position: | chr2:82799575-82800436 (view UCSC Genome Browser custom track) |
| Alignm length: | 864 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 625, 11 |
| Conread position: | 10-589 |
| Cow position: | chr2:86465401-86465979 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 9 |
| Conread position: | 10-837 |
| Cow position: | chr2:78755219-78756050 (view UCSC Genome Browser custom track) |
| Alignm length: | 843 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 506, 12 |
| Conread position: | 17-829 |
| Cow position: | chr2:86465325-86466144 (view UCSC Genome Browser custom track) |
| Alignm length: | 826 |
| Alignm identity: | 484 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 101, 22 |
| Conread position: | 18-829 |
| Cow position: | chr2:78755560-78756375 (view UCSC Genome Browser custom track) |
| Alignm length: | 828 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 107 |
| Conread position: | 19-589 |
| Cow position: | chr2:86465579-86466147 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 8 |
| Conread position: | 19-619 |
| Cow position: | chr2:78755727-78756326 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 23 |
| Conread position: | 20-377 |
| Cow position: | chr2:48689398-48689039 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 255, 229 |
| Conread position: | 23-353 |
| Cow position: | chr2:5874447-5874117 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 86, 82 |
| Conread position: | 23-628 |
| Cow position: | chr2:5875035-5874430 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 365 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 138, 161 |
| Conread position: | 23-628 |
| Cow position: | chr2:5875119-5874514 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 157 |
| Conread position: | 23-860 |
| Cow position: | chr2:78754659-78755488 (view UCSC Genome Browser custom track) |
| Alignm length: | 852 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 42 |
| Conread position: | 24-629 |
| Cow position: | chr2:82799842-82800447 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 97 |
| Conread position: | 24-859 |
| Cow position: | chr2:82799506-82800350 (view UCSC Genome Browser custom track) |
| Alignm length: | 850 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 220 |
| Conread position: | 25-830 |
| Cow position: | chr2:78754243-78755039 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 205 |
| Conread position: | 28-625 |
| Cow position: | chr2:5874946-5874349 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 361 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 49, 71 |
| Conread position: | 29-555 |
| Cow position: | chr2:78755905-78756428 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 324 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 149, 209 |
| Conread position: | 29-585 |
| Cow position: | chr2:86465671-86466225 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 176 |
| Conread position: | 29-589 |
| Cow position: | chr2:86465167-86465727 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 94 |
| Conread position: | 44-546 |
| Cow position: | chr2:82799946-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 69 |
| Conread position: | 45-604 |
| Cow position: | chr2:5874677-5874118 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 54 |
| Conread position: | 45-625 |
| Cow position: | chr2:5874761-5874181 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 360 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 64, 59 |
| Conread position: | 47-831 |
| Cow position: | chr2:78754835-78755626 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 299 |
| Conread position: | 60-864 |
| Cow position: | chr2:82799458-82800271 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 194 |
| Conread position: | 102-842 |
| Cow position: | chr2:78754807-78755553 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 6 |
| Conread position: | 115-627 |
| Cow position: | chr2:48689554-48689043 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 189-862 |
| Cow position: | chr2:86465159-86465841 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 182 |
| Conread position: | 198-629 |
| Cow position: | chr2:86465084-86465515 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 233-594 |
| Cow position: | chr2:5875161-5874800 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 207, 195 |
| Conread position: | 258-862 |
| Cow position: | chr2:86464976-86465589 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 362 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 350, 435 |
| Conread position: | 382-626 |
| Cow position: | chr2:5875180-5874936 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.