Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010075C11.5 |
| Conread position: | 3-628 |
| Cow position: | |
| Alignm length: | 632 |
| Alignm identity: | 372 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 10, 338 |
| Conread position: | 3-796 |
| Cow position: | |
| Alignm length: | 803 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 630, 0 |
| Conread position: | 4-628 |
| Cow position: | |
| Alignm length: | 627 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 424, 440 |
| Conread position: | 6-864 |
| Cow position: | |
| Alignm length: | 872 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 13 |
| Conread position: | 8-796 |
| Cow position: | |
| Alignm length: | 801 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 508, 11 |
| Conread position: | 8-860 |
| Cow position: | |
| Alignm length: | 864 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 11 |
| Conread position: | 8-863 |
| Cow position: | |
| Alignm length: | 868 |
| Alignm identity: | 583 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 13 |
| Conread position: | 8-864 |
| Cow position: | |
| Alignm length: | 869 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 11 |
| Conread position: | 8-864 |
| Cow position: | |
| Alignm length: | 871 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 11 |
| Conread position: | 9-541 |
| Cow position: | |
| Alignm length: | 534 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 10-537 |
| Cow position: | |
| Alignm length: | 528 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-298 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 18-861 |
| Cow position: | |
| Alignm length: | 856 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 98 |
| Conread position: | 18-864 |
| Cow position: | |
| Alignm length: | 858 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 615, 675 |
| Conread position: | 19-469 |
| Cow position: | |
| Alignm length: | 451 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-554 |
| Cow position: | |
| Alignm length: | 538 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 258 |
| Conread position: | 19-582 |
| Cow position: | |
| Alignm length: | 565 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 247 |
| Conread position: | 19-628 |
| Cow position: | |
| Alignm length: | 610 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-633 |
| Cow position: | |
| Alignm length: | 618 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 97 |
| Conread position: | 19-864 |
| Cow position: | |
| Alignm length: | 857 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 614, 692 |
| Conread position: | 19-864 |
| Cow position: | |
| Alignm length: | 857 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 21-545 |
| Cow position: | |
| Alignm length: | 527 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 332 |
| Conread position: | 21-811 |
| Cow position: | |
| Alignm length: | 811 |
| Alignm identity: | 483 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 78, 23 |
| Conread position: | 23-220 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 182, 177 |
| Conread position: | 23-459 |
| Cow position: | |
| Alignm length: | 437 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-557 |
| Cow position: | |
| Alignm length: | 541 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 23-558 |
| Cow position: | |
| Alignm length: | 537 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 152 |
| Conread position: | 23-558 |
| Cow position: | |
| Alignm length: | 537 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 152 |
| Conread position: | 23-629 |
| Cow position: | |
| Alignm length: | 612 |
| Alignm identity: | 367 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 170, 160 |
| Conread position: | 23-633 |
| Cow position: | |
| Alignm length: | 616 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 154 |
| Conread position: | 23-633 |
| Cow position: | |
| Alignm length: | 613 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 159 |
| Conread position: | 23-633 |
| Cow position: | |
| Alignm length: | 617 |
| Alignm identity: | 376 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 23-847 |
| Cow position: | |
| Alignm length: | 838 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 159 |
| Conread position: | 23-864 |
| Cow position: | |
| Alignm length: | 852 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 612, 688 |
| Conread position: | 24-386 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 70 |
| Conread position: | 24-473 |
| Cow position: | |
| Alignm length: | 456 |
| Alignm identity: | 295 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 83, 70 |
| Conread position: | 24-492 |
| Cow position: | |
| Alignm length: | 475 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 37 |
| Conread position: | 24-553 |
| Cow position: | |
| Alignm length: | 538 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 71 |
| Conread position: | 24-557 |
| Cow position: | |
| Alignm length: | 537 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 71 |
| Conread position: | 24-625 |
| Cow position: | |
| Alignm length: | 619 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 24-627 |
| Cow position: | |
| Alignm length: | 606 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 495, 483 |
| Conread position: | 24-628 |
| Cow position: | |
| Alignm length: | 606 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 235 |
| Conread position: | 24-628 |
| Cow position: | |
| Alignm length: | 609 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 160 |
| Conread position: | 24-629 |
| Cow position: | |
| Alignm length: | 609 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 91 |
| Conread position: | 24-633 |
| Cow position: | |
| Alignm length: | 612 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 24-633 |
| Cow position: | |
| Alignm length: | 611 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 7 |
| Conread position: | 24-789 |
| Cow position: | |
| Alignm length: | 776 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 609, 687 |
| Conread position: | 24-833 |
| Cow position: | |
| Alignm length: | 830 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 17 |
| Conread position: | 24-861 |
| Cow position: | |
| Alignm length: | 850 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 238 |
| Conread position: | 24-862 |
| Cow position: | |
| Alignm length: | 853 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 92 |
| Conread position: | 25-832 |
| Cow position: | |
| Alignm length: | 824 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 39 |
| Conread position: | 25-864 |
| Cow position: | |
| Alignm length: | 851 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 237 |
| Conread position: | 29-585 |
| Cow position: | |
| Alignm length: | 565 |
| Alignm identity: | 349 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 238, 218 |
| Conread position: | 33-486 |
| Cow position: | |
| Alignm length: | 458 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 53 |
| Conread position: | 45-466 |
| Cow position: | |
| Alignm length: | 423 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 45-604 |
| Cow position: | |
| Alignm length: | 562 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 275 |
| Conread position: | 45-841 |
| Cow position: | |
| Alignm length: | 812 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 217 |
| Conread position: | 46-589 |
| Cow position: | |
| Alignm length: | 552 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 136 |
| Conread position: | 46-627 |
| Cow position: | |
| Alignm length: | 588 |
| Alignm identity: | 350 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 233, 206 |
| Conread position: | 46-633 |
| Cow position: | |
| Alignm length: | 591 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 8 |
| Conread position: | 46-799 |
| Cow position: | |
| Alignm length: | 767 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 154 |
| Conread position: | 46-861 |
| Cow position: | |
| Alignm length: | 826 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 585, 681 |
| Conread position: | 50-864 |
| Cow position: | |
| Alignm length: | 826 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 585, 661 |
| Conread position: | 53-557 |
| Cow position: | |
| Alignm length: | 510 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 125 |
| Conread position: | 53-629 |
| Cow position: | |
| Alignm length: | 581 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 126 |
| Conread position: | 57-863 |
| Cow position: | |
| Alignm length: | 821 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 68 |
| Conread position: | 58-860 |
| Cow position: | |
| Alignm length: | 813 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 60-631 |
| Cow position: | |
| Alignm length: | 572 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 568, 0 |
| Conread position: | 60-856 |
| Cow position: | |
| Alignm length: | 816 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 60-860 |
| Cow position: | |
| Alignm length: | 813 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 115 |
| Conread position: | 60-864 |
| Cow position: | |
| Alignm length: | 817 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 571, 653 |
| Conread position: | 60-864 |
| Cow position: | |
| Alignm length: | 816 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 115 |
| Conread position: | 109-864 |
| Cow position: | |
| Alignm length: | 783 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 619 |
| Conread position: | 119-833 |
| Cow position: | |
| Alignm length: | 727 |
| Alignm identity: | 433 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 225, 221 |
| Conread position: | 125-830 |
| Cow position: | |
| Alignm length: | 724 |
| Alignm identity: | 434 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 226, 215 |
| Conread position: | 126-860 |
| Cow position: | |
| Alignm length: | 744 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 507, 0 |
| Conread position: | 126-861 |
| Cow position: | |
| Alignm length: | 746 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 37 |
| Conread position: | 138-618 |
| Cow position: | |
| Alignm length: | 483 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 124 |
| Conread position: | 138-633 |
| Cow position: | |
| Alignm length: | 500 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 197 |
| Conread position: | 142-628 |
| Cow position: | |
| Alignm length: | 487 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 144-634 |
| Cow position: | |
| Alignm length: | 494 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 177-824 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 33 |
| Conread position: | 183-829 |
| Cow position: | |
| Alignm length: | 661 |
| Alignm identity: | 405 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 77, 64 |
| Conread position: | 198-502 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 264, 201 |
| Conread position: | 198-826 |
| Cow position: | |
| Alignm length: | 645 |
| Alignm identity: | 389 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 204-861 |
| Cow position: | |
| Alignm length: | 664 |
| Alignm identity: | 390 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 234, 228 |
| Conread position: | 215-864 |
| Cow position: | |
| Alignm length: | 661 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 105 |
| Conread position: | 224-861 |
| Cow position: | |
| Alignm length: | 649 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 69 |
| Conread position: | 225-633 |
| Cow position: | |
| Alignm length: | 412 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 113, 118 |
| Conread position: | 276-586 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 35, 50 |
| Conread position: | 276-861 |
| Cow position: | |
| Alignm length: | 597 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 435 |
| Conread position: | 276-861 |
| Cow position: | |
| Alignm length: | 597 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 436 |
| Conread position: | 285-863 |
| Cow position: | |
| Alignm length: | 592 |
| Alignm identity: | 358 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 59, 55 |
| Conread position: | 306-554 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 324-829 |
| Cow position: | |
| Alignm length: | 519 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 117, 9 |
| Conread position: | 336-857 |
| Cow position: | |
| Alignm length: | 534 |
| Alignm identity: | 328 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 253, 267 |
| Conread position: | 360-829 |
| Cow position: | |
| Alignm length: | 484 |
| Alignm identity: | 296 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 360-864 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 351 |
| Conread position: | 438-864 |
| Cow position: | |
| Alignm length: | 437 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 269 |
| Conread position: | 452-837 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 179, 9 |
| Conread position: | 475-864 |
| Cow position: | |
| Alignm length: | 401 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 22 |
Show alignments to all cow chromosomes.