Cow genome map
Conread name: | Ss1.1-Lng1-LNG010075C11.5 |
Conread position: | 6-625 |
Cow position: | chr24:17078216-17077597 (view UCSC Genome Browser custom track) |
Alignm length: | 620 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 7-629 |
Cow position: | chr24:17078130-17077509 (view UCSC Genome Browser custom track) |
Alignm length: | 625 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 12 |
Conread position: | 18-460 |
Cow position: | chr24:17070600-17071042 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 241, 223 |
Conread position: | 22-633 |
Cow position: | chr24:17070436-17071047 (view UCSC Genome Browser custom track) |
Alignm length: | 613 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 153 |
Conread position: | 23-313 |
Cow position: | chr24:17035224-17034935 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 181 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 277, 0 |
Conread position: | 23-546 |
Cow position: | chr24:17078031-17077508 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 445, 452 |
Conread position: | 23-549 |
Cow position: | chr24:17035476-17034950 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 154 |
Conread position: | 23-564 |
Cow position: | chr24:17070521-17071062 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 224 |
Conread position: | 23-625 |
Cow position: | chr24:17035560-17034958 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 93 |
Conread position: | 23-628 |
Cow position: | chr24:17035728-17035123 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 23-633 |
Cow position: | chr24:17078283-17077673 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 23-861 |
Cow position: | chr24:17036148-17035301 (view UCSC Genome Browser custom track) |
Alignm length: | 852 |
Alignm identity: | 563 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 154 |
Conread position: | 23-861 |
Cow position: | chr24:17036316-17035469 (view UCSC Genome Browser custom track) |
Alignm length: | 849 |
Alignm identity: | 542 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 38 |
Conread position: | 23-864 |
Cow position: | chr24:17036400-17035550 (view UCSC Genome Browser custom track) |
Alignm length: | 853 |
Alignm identity: | 538 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 610, 642 |
Conread position: | 24-303 |
Cow position: | chr24:17013227-17013506 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 191 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 97, 91 |
Conread position: | 24-341 |
Cow position: | chr24:17077778-17077462 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 200 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 85, 80 |
Conread position: | 24-627 |
Cow position: | chr24:17035643-17035040 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 37 |
Conread position: | 24-864 |
Cow position: | chr24:17035895-17035046 (view UCSC Genome Browser custom track) |
Alignm length: | 851 |
Alignm identity: | 542 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 37 |
Conread position: | 24-864 |
Cow position: | chr24:17036564-17035718 (view UCSC Genome Browser custom track) |
Alignm length: | 855 |
Alignm identity: | 565 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 15 |
Conread position: | 45-861 |
Cow position: | chr24:17078345-17077520 (view UCSC Genome Browser custom track) |
Alignm length: | 827 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 590, 667 |
Conread position: | 56-268 |
Cow position: | chr24:16986441-16986653 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 150 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 66, 59 |
Conread position: | 60-385 |
Cow position: | chr24:17013179-17013504 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 214 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 124-352 |
Cow position: | chr24:16986425-16986653 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 157 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 34, 51 |
Conread position: | 127-491 |
Cow position: | chr24:17013162-17013525 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 120 |
Conread position: | 176-533 |
Cow position: | chr24:17013126-17013484 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 270 |
Conread position: | 192-864 |
Cow position: | chr24:17070353-17071035 (view UCSC Genome Browser custom track) |
Alignm length: | 686 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 65 |
Conread position: | 192-864 |
Cow position: | chr24:17078282-17077601 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 444, 0 |
Conread position: | 207-864 |
Cow position: | chr24:17078351-17077685 (view UCSC Genome Browser custom track) |
Alignm length: | 670 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 426, 504 |
Conread position: | 208-431 |
Cow position: | chr24:16986425-16986648 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 151 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 292-514 |
Cow position: | chr24:16986425-16986647 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 145 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 332-860 |
Cow position: | chr24:17078394-17077857 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 312 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 30, 20 |
Conread position: | 401-629 |
Cow position: | chr24:17013184-17013412 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 158 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 569-860 |
Cow position: | chr24:17013184-17013484 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 193 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 64, 134 |
Show alignments to all cow chromosomes.