Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010075C11.5 |
| Conread position: | 1-462 |
| Cow position: | chr25:34714076-34714533 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 301 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 252, 8 |
| Conread position: | 1-520 |
| Cow position: | chr25:33305360-33304849 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 5 |
| Conread position: | 1-859 |
| Cow position: | chr25:33298773-33299638 (view UCSC Genome Browser custom track) |
| Alignm length: | 873 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 5 |
| Conread position: | 3-864 |
| Cow position: | chr25:34770166-34769296 (view UCSC Genome Browser custom track) |
| Alignm length: | 874 |
| Alignm identity: | 585 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 245 |
| Conread position: | 4-541 |
| Cow position: | chr25:33144892-33145426 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 120 |
| Conread position: | 6-786 |
| Cow position: | chr25:34762958-34763741 (view UCSC Genome Browser custom track) |
| Alignm length: | 791 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 627, 149 |
| Conread position: | 7-626 |
| Cow position: | chr25:34732393-34731775 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 373 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 71, 7 |
| Conread position: | 7-633 |
| Cow position: | chr25:33299114-33299739 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 14 |
| Conread position: | 8-250 |
| Cow position: | chr25:23420597-23420840 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 9-633 |
| Cow position: | chr25:326546-327175 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 366, 15 |
| Conread position: | 10-534 |
| Cow position: | chr25:34473556-34474077 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 83 |
| Conread position: | 10-629 |
| Cow position: | chr25:33157508-33156889 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 76 |
| Conread position: | 15-856 |
| Cow position: | chr25:25652325-25653176 (view UCSC Genome Browser custom track) |
| Alignm length: | 856 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 232 |
| Conread position: | 18-549 |
| Cow position: | chr25:34447415-34447935 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 18-627 |
| Cow position: | chr25:34713923-34714532 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 86 |
| Conread position: | 20-377 |
| Cow position: | chr25:22235972-22236331 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 172, 162 |
| Conread position: | 22-625 |
| Cow position: | chr25:33299044-33299647 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 219 |
| Conread position: | 22-864 |
| Cow position: | chr25:36801112-36801951 (view UCSC Genome Browser custom track) |
| Alignm length: | 856 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 224 |
| Conread position: | 23-303 |
| Cow position: | chr25:326985-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 23-385 |
| Cow position: | chr25:33299465-33299827 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 86, 82 |
| Conread position: | 23-421 |
| Cow position: | chr25:23420445-23420843 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-471 |
| Cow position: | chr25:22235891-22236339 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 282 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 71, 63 |
| Conread position: | 23-497 |
| Cow position: | chr25:36801521-36801991 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 98, 92 |
| Conread position: | 23-546 |
| Cow position: | chr25:34769726-34769203 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 234 |
| Conread position: | 23-556 |
| Cow position: | chr25:34433502-34434029 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 326 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 156, 103 |
| Conread position: | 23-627 |
| Cow position: | chr25:33299213-33299817 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-628 |
| Cow position: | chr25:34447252-34447848 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 224 |
| Conread position: | 23-840 |
| Cow position: | chr25:36800693-36801505 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 93 |
| Conread position: | 24-317 |
| Cow position: | chr25:33127949-33128242 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-343 |
| Cow position: | chr25:23420530-23420849 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 97, 92 |
| Conread position: | 24-396 |
| Cow position: | chr25:33127865-33128237 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 24-474 |
| Cow position: | chr25:33127781-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 382, 375 |
| Conread position: | 24-475 |
| Cow position: | chr25:3664078-3664529 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-486 |
| Cow position: | chr25:33157242-33156781 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 448, 0 |
| Conread position: | 24-589 |
| Cow position: | chr25:34769809-34769244 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 62 |
| Conread position: | 24-626 |
| Cow position: | chr25:25652755-25653357 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 100 |
| Conread position: | 24-628 |
| Cow position: | chr25:25652587-25653191 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 240 |
| Conread position: | 24-628 |
| Cow position: | chr25:33306156-33305555 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 376 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 82, 212 |
| Conread position: | 24-633 |
| Cow position: | chr25:33157410-33156801 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 230 |
| Conread position: | 24-802 |
| Cow position: | chr25:34732545-34731757 (view UCSC Genome Browser custom track) |
| Alignm length: | 791 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 24-823 |
| Cow position: | chr25:33298626-33299434 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 154 |
| Conread position: | 24-829 |
| Cow position: | chr25:33298710-33299524 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 616, 685 |
| Conread position: | 24-857 |
| Cow position: | chr25:34447085-34447916 (view UCSC Genome Browser custom track) |
| Alignm length: | 841 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 217 |
| Conread position: | 24-862 |
| Cow position: | chr25:34447001-34447841 (view UCSC Genome Browser custom track) |
| Alignm length: | 851 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 495, 484 |
| Conread position: | 26-627 |
| Cow position: | chr25:36801356-36801957 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 27-798 |
| Cow position: | chr25:326481-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 789 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 407, 20 |
| Conread position: | 28-252 |
| Cow position: | chr25:34433003-34433227 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 32-493 |
| Cow position: | chr25:22235816-22236277 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 42-586 |
| Cow position: | chr25:33305406-33304867 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 342 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 5, 74 |
| Conread position: | 43-863 |
| Cow position: | chr25:36800461-36801290 (view UCSC Genome Browser custom track) |
| Alignm length: | 836 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 41 |
| Conread position: | 44-830 |
| Cow position: | chr25:33298478-33299272 (view UCSC Genome Browser custom track) |
| Alignm length: | 799 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 44-864 |
| Cow position: | chr25:33305719-33304914 (view UCSC Genome Browser custom track) |
| Alignm length: | 833 |
| Alignm identity: | 500 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 41, 50 |
| Conread position: | 45-305 |
| Cow position: | chr25:34733925-34733665 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 76 |
| Conread position: | 45-458 |
| Cow position: | chr25:3675992-3676405 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 45-476 |
| Cow position: | chr25:36844620-36844198 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 268 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 75, 69 |
| Conread position: | 45-541 |
| Cow position: | chr25:23420383-23420879 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 45-616 |
| Cow position: | chr25:34433689-34434245 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 343 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 118, 139 |
| Conread position: | 45-627 |
| Cow position: | chr25:33144849-33145428 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 163 |
| Conread position: | 45-628 |
| Cow position: | chr25:3664015-3664598 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 347 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 45-628 |
| Cow position: | chr25:25652188-25652771 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 130 |
| Conread position: | 45-842 |
| Cow position: | chr25:34446938-34447742 (view UCSC Genome Browser custom track) |
| Alignm length: | 811 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 471, 481 |
| Conread position: | 45-864 |
| Cow position: | chr25:34732608-34731780 (view UCSC Genome Browser custom track) |
| Alignm length: | 837 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 133 |
| Conread position: | 46-289 |
| Cow position: | chr25:427330-427573 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 70 |
| Conread position: | 46-626 |
| Cow position: | chr25:3663932-3664512 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 57 |
| Conread position: | 46-861 |
| Cow position: | chr25:33306046-33305250 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 101 |
| Conread position: | 47-472 |
| Cow position: | chr25:4657463-4657038 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 146, 133 |
| Conread position: | 47-621 |
| Cow position: | chr25:34473509-34474080 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 340 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 62, 56 |
| Conread position: | 47-829 |
| Cow position: | chr25:36800633-36801412 (view UCSC Genome Browser custom track) |
| Alignm length: | 788 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 209 |
| Conread position: | 51-391 |
| Cow position: | chr25:346454-346794 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 96, 103 |
| Conread position: | 51-860 |
| Cow position: | chr25:34713703-34714522 (view UCSC Genome Browser custom track) |
| Alignm length: | 824 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 79 |
| Conread position: | 57-824 |
| Cow position: | chr25:33157545-33156769 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 58-851 |
| Cow position: | chr25:33306285-33305491 (view UCSC Genome Browser custom track) |
| Alignm length: | 808 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 104 |
| Conread position: | 59-503 |
| Cow position: | chr25:33529028-33529472 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 59-842 |
| Cow position: | chr25:33306448-33305668 (view UCSC Genome Browser custom track) |
| Alignm length: | 802 |
| Alignm identity: | 488 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 144, 103 |
| Conread position: | 60-569 |
| Cow position: | chr25:33127733-33128242 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 64-856 |
| Cow position: | chr25:34446873-34447674 (view UCSC Genome Browser custom track) |
| Alignm length: | 804 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 56 |
| Conread position: | 65-604 |
| Cow position: | chr25:23420319-23420858 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 454, 442 |
| Conread position: | 66-626 |
| Cow position: | chr25:25652293-25652853 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 368 |
| Conread position: | 99-434 |
| Cow position: | chr25:18642201-18641865 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 72, 81 |
| Conread position: | 104-382 |
| Cow position: | chr25:427303-427582 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 111-352 |
| Cow position: | chr25:30534708-30534945 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 115-598 |
| Cow position: | chr25:22235815-22236298 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 119-633 |
| Cow position: | chr25:33127708-33128222 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 122-861 |
| Cow position: | chr25:34732615-34731867 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 518, 571 |
| Conread position: | 123-562 |
| Cow position: | chr25:36844626-36844196 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 266 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 280, 0 |
| Conread position: | 125-633 |
| Cow position: | chr25:34762825-34763330 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 0 |
| Conread position: | 126-629 |
| Cow position: | chr25:33144846-33145346 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 120 |
| Conread position: | 128-451 |
| Cow position: | chr25:366724-367047 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 118, 134 |
| Conread position: | 128-478 |
| Cow position: | chr25:34732105-34731756 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 332, 0 |
| Conread position: | 128-541 |
| Cow position: | chr25:346447-346860 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 129-534 |
| Cow position: | chr25:3675992-3676397 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 133, 120 |
| Conread position: | 129-842 |
| Cow position: | chr25:33298479-33299201 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 80 |
| Conread position: | 130-628 |
| Cow position: | chr25:3663932-3664430 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 306 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 131-556 |
| Cow position: | chr25:4657463-4657038 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 145, 133 |
| Conread position: | 131-628 |
| Cow position: | chr25:34473509-34474003 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 277, 286 |
| Conread position: | 159-631 |
| Cow position: | chr25:23420329-23420801 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 367 |
| Conread position: | 176-619 |
| Cow position: | chr25:326376-326819 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 286 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 88, 78 |
| Conread position: | 183-514 |
| Cow position: | chr25:18642201-18641867 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 135, 182 |
| Conread position: | 183-609 |
| Cow position: | chr25:414721-414303 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 311, 20 |
| Conread position: | 184-614 |
| Cow position: | chr25:34433495-34433921 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 269 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 192-419 |
| Cow position: | chr25:34733946-34733719 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 192-628 |
| Cow position: | chr25:33305421-33304991 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 17 |
| Conread position: | 195-864 |
| Cow position: | chr25:326479-327163 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 418 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 321, 331 |
| Conread position: | 196-618 |
| Cow position: | chr25:346433-346853 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 119, 13 |
| Conread position: | 196-829 |
| Cow position: | chr25:34732624-34731982 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 10 |
| Conread position: | 209-862 |
| Cow position: | chr25:34446934-34447596 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 421, 493 |
| Conread position: | 210-633 |
| Cow position: | chr25:33144846-33145266 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 0 |
| Conread position: | 212-542 |
| Cow position: | chr25:366724-367054 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 103, 108 |
| Conread position: | 213-863 |
| Cow position: | chr25:34433020-34433676 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 421 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 206, 327 |
| Conread position: | 213-864 |
| Cow position: | chr25:33298479-33299139 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 80 |
| Conread position: | 216-466 |
| Cow position: | chr25:427332-427582 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 193, 206 |
| Conread position: | 225-864 |
| Cow position: | chr25:33157545-33156897 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 24 |
| Conread position: | 227-531 |
| Cow position: | chr25:34733995-34733691 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 233-633 |
| Cow position: | chr25:23420319-23420719 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 234-625 |
| Cow position: | chr25:4657444-4657053 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 260-633 |
| Cow position: | chr25:326376-326749 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 278-566 |
| Cow position: | chr25:36844639-36844351 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 279-864 |
| Cow position: | chr25:36800445-36801039 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 356 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 82, 55 |
| Conread position: | 288-823 |
| Cow position: | chr25:33298470-33299014 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 338 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 345, 423 |
| Conread position: | 296-628 |
| Cow position: | chr25:346447-346779 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 187, 194 |
| Conread position: | 298-828 |
| Cow position: | chr25:3663932-3664472 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 328 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 18, 22 |
| Conread position: | 311-613 |
| Cow position: | chr25:34733995-34733693 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 311-628 |
| Cow position: | chr25:4657451-4657134 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 127, 121 |
| Conread position: | 314-864 |
| Cow position: | chr25:23420316-23420875 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 199 |
| Conread position: | 315-864 |
| Cow position: | chr25:33127653-33128210 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 382-626 |
| Cow position: | chr25:427330-427574 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 383-628 |
| Cow position: | chr25:4657463-4657218 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 402-864 |
| Cow position: | chr25:33144870-33145338 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 142 |
| Conread position: | 447-861 |
| Cow position: | chr25:33157575-33157152 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 43, 55 |
| Conread position: | 456-864 |
| Cow position: | chr25:33298470-33298887 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 180, 237 |
| Conread position: | 485-864 |
| Cow position: | chr25:34446874-34447262 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 47, 54 |
| Conread position: | 709-864 |
| Cow position: | chr25:34433021-34433176 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.