Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010075C11.5 |
| Conread position: | 1-496 |
| Cow position: | |
| Alignm length: | 498 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 7 |
| Conread position: | 3-864 |
| Cow position: | |
| Alignm length: | 873 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 513, 16 |
| Conread position: | 6-629 |
| Cow position: | |
| Alignm length: | 625 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 13 |
| Conread position: | 6-815 |
| Cow position: | |
| Alignm length: | 822 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 13 |
| Conread position: | 7-864 |
| Cow position: | |
| Alignm length: | 870 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 12 |
| Conread position: | 9-632 |
| Cow position: | |
| Alignm length: | 625 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 10 |
| Conread position: | 12-859 |
| Cow position: | |
| Alignm length: | 859 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 636, 7 |
| Conread position: | 12-864 |
| Cow position: | |
| Alignm length: | 864 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 19-302 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 240, 247 |
| Conread position: | 19-502 |
| Cow position: | |
| Alignm length: | 484 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-633 |
| Cow position: | |
| Alignm length: | 618 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 264 |
| Conread position: | 20-618 |
| Cow position: | |
| Alignm length: | 599 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-810 |
| Cow position: | |
| Alignm length: | 800 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 613, 689 |
| Conread position: | 23-385 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 23-408 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 135, 161 |
| Conread position: | 23-445 |
| Cow position: | |
| Alignm length: | 426 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 233, 224 |
| Conread position: | 23-548 |
| Cow position: | |
| Alignm length: | 526 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-863 |
| Cow position: | |
| Alignm length: | 853 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 218 |
| Conread position: | 23-863 |
| Cow position: | |
| Alignm length: | 852 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 332 |
| Conread position: | 24-625 |
| Cow position: | |
| Alignm length: | 607 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 142 |
| Conread position: | 24-858 |
| Cow position: | |
| Alignm length: | 847 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 233 |
| Conread position: | 24-860 |
| Cow position: | |
| Alignm length: | 847 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 611, 687 |
| Conread position: | 24-864 |
| Cow position: | |
| Alignm length: | 854 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 101 |
| Conread position: | 44-864 |
| Cow position: | |
| Alignm length: | 832 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 203 |
| Conread position: | 57-864 |
| Cow position: | |
| Alignm length: | 819 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 201 |
| Conread position: | 66-491 |
| Cow position: | |
| Alignm length: | 427 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 270, 284 |
| Conread position: | 69-864 |
| Cow position: | |
| Alignm length: | 806 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 579, 642 |
| Conread position: | 107-864 |
| Cow position: | |
| Alignm length: | 772 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 58 |
| Conread position: | 117-859 |
| Cow position: | |
| Alignm length: | 755 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 140 |
| Conread position: | 118-864 |
| Cow position: | |
| Alignm length: | 761 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 578 |
| Conread position: | 128-864 |
| Cow position: | |
| Alignm length: | 747 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 449, 457 |
| Conread position: | 129-554 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 272 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 46, 42 |
| Conread position: | 136-581 |
| Cow position: | |
| Alignm length: | 448 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 16, 287 |
| Conread position: | 199-829 |
| Cow position: | |
| Alignm length: | 643 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 65 |
| Conread position: | 212-831 |
| Cow position: | |
| Alignm length: | 632 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 98 |
| Conread position: | 234-629 |
| Cow position: | |
| Alignm length: | 396 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 284, 0 |
| Conread position: | 289-864 |
| Cow position: | |
| Alignm length: | 589 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 48 |
| Conread position: | 396-861 |
| Cow position: | |
| Alignm length: | 478 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 27, 36 |
| Conread position: | 402-832 |
| Cow position: | |
| Alignm length: | 442 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 230, 310 |
Show alignments to all cow chromosomes.