Cow genome map
Conread name: | Ss1.1-Lng1-LNG010075C11.5 |
Conread position: | 1-496 |
Cow position: | chr8:45201480-45201973 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 7 |
Conread position: | 3-864 |
Cow position: | chr8:46816172-46817041 (view UCSC Genome Browser custom track) |
Alignm length: | 873 |
Alignm identity: | 549 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 513, 16 |
Conread position: | 6-629 |
Cow position: | chr8:46816679-46817301 (view UCSC Genome Browser custom track) |
Alignm length: | 625 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 13 |
Conread position: | 6-815 |
Cow position: | chr8:48407584-48406767 (view UCSC Genome Browser custom track) |
Alignm length: | 822 |
Alignm identity: | 535 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 13 |
Conread position: | 7-864 |
Cow position: | chr8:46816428-46817293 (view UCSC Genome Browser custom track) |
Alignm length: | 870 |
Alignm identity: | 557 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 12 |
Conread position: | 9-632 |
Cow position: | chr8:55581039-55581661 (view UCSC Genome Browser custom track) |
Alignm length: | 625 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 10 |
Conread position: | 12-859 |
Cow position: | chr8:46816349-46817204 (view UCSC Genome Browser custom track) |
Alignm length: | 859 |
Alignm identity: | 556 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 636, 7 |
Conread position: | 12-864 |
Cow position: | chr8:46816013-46816873 (view UCSC Genome Browser custom track) |
Alignm length: | 864 |
Alignm identity: | 545 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 22 |
Conread position: | 19-302 |
Cow position: | chr8:48406564-48406281 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 177 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 240, 247 |
Conread position: | 19-502 |
Cow position: | chr8:46816859-46817342 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 19-633 |
Cow position: | chr8:48406984-48406370 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 264 |
Conread position: | 20-618 |
Cow position: | chr8:46816776-46817374 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-810 |
Cow position: | chr8:55580967-55581765 (view UCSC Genome Browser custom track) |
Alignm length: | 800 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 613, 689 |
Conread position: | 23-385 |
Cow position: | chr8:6958018-6957657 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 218 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 216, 0 |
Conread position: | 23-408 |
Cow position: | chr8:48406644-48406259 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 250 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 135, 161 |
Conread position: | 23-445 |
Cow position: | chr8:45201584-45202006 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 277 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 233, 224 |
Conread position: | 23-548 |
Cow position: | chr8:45201416-45201941 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 23-863 |
Cow position: | chr8:45201080-45201929 (view UCSC Genome Browser custom track) |
Alignm length: | 853 |
Alignm identity: | 549 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 233, 218 |
Conread position: | 23-863 |
Cow position: | chr8:46816527-46817376 (view UCSC Genome Browser custom track) |
Alignm length: | 852 |
Alignm identity: | 530 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 338, 332 |
Conread position: | 24-625 |
Cow position: | chr8:48406895-48406294 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 142 |
Conread position: | 24-858 |
Cow position: | chr8:55580885-55581728 (view UCSC Genome Browser custom track) |
Alignm length: | 847 |
Alignm identity: | 533 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 228, 233 |
Conread position: | 24-860 |
Cow position: | chr8:46816108-46816953 (view UCSC Genome Browser custom track) |
Alignm length: | 847 |
Alignm identity: | 539 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 611, 687 |
Conread position: | 24-864 |
Cow position: | chr8:45200913-45201762 (view UCSC Genome Browser custom track) |
Alignm length: | 854 |
Alignm identity: | 547 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 101 |
Conread position: | 44-864 |
Cow position: | chr8:45201017-45201846 (view UCSC Genome Browser custom track) |
Alignm length: | 832 |
Alignm identity: | 533 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 203 |
Conread position: | 57-864 |
Cow position: | chr8:48407618-48406802 (view UCSC Genome Browser custom track) |
Alignm length: | 819 |
Alignm identity: | 523 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 201 |
Conread position: | 66-491 |
Cow position: | chr8:6958059-6957635 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 250 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 270, 284 |
Conread position: | 69-864 |
Cow position: | chr8:55580846-55581650 (view UCSC Genome Browser custom track) |
Alignm length: | 806 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 579, 642 |
Conread position: | 107-864 |
Cow position: | chr8:45200828-45201594 (view UCSC Genome Browser custom track) |
Alignm length: | 772 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 58 |
Conread position: | 117-859 |
Cow position: | chr8:55580810-55581561 (view UCSC Genome Browser custom track) |
Alignm length: | 755 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 140 |
Conread position: | 118-864 |
Cow position: | chr8:46815863-46816621 (view UCSC Genome Browser custom track) |
Alignm length: | 761 |
Alignm identity: | 459 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 578 |
Conread position: | 128-864 |
Cow position: | chr8:48407631-48406886 (view UCSC Genome Browser custom track) |
Alignm length: | 747 |
Alignm identity: | 479 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 449, 457 |
Conread position: | 129-554 |
Cow position: | chr8:48406706-48406281 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 272 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 46, 42 |
Conread position: | 136-581 |
Cow position: | chr8:6958074-6957629 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 274 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 16, 287 |
Conread position: | 199-829 |
Cow position: | chr8:55580808-55581447 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 65 |
Conread position: | 212-831 |
Cow position: | chr8:55580736-55581365 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 98 |
Conread position: | 234-629 |
Cow position: | chr8:6958059-6957665 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 238 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 284, 0 |
Conread position: | 289-864 |
Cow position: | chr8:48407638-48407054 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 48 |
Conread position: | 396-861 |
Cow position: | chr8:55580837-55581311 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 308 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 27, 36 |
Conread position: | 402-832 |
Cow position: | chr8:45200787-45201226 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 271 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 230, 310 |
Show alignments to all cow chromosomes.