Cow genome map

Conread name: Ss1.1-Lng1-LNG010075C11.5

Conread position: 1-633
Cow position: chrX:25309931-25310562 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 18

Conread position: 1-864
Cow position: chrX:25325209-25324339 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 7

Conread position: 3-483
Cow position: chrX:29045133-29044654 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 21

Conread position: 3-560
Cow position: chrX:29045217-29044661 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 18

Conread position: 6-628
Cow position: chrX:25324953-25324332 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 6-863
Cow position: chrX:25325709-25324844 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 13

Conread position: 9-633
Cow position: chrX:29045296-29044672 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 228

Conread position: 10-408
Cow position: chrX:13826563-13826165 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 239
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 111

Conread position: 18-864
Cow position: chrX:25309695-25310550 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 223

Conread position: 19-490
Cow position: chrX:25324689-25324220 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 292
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 156, 146

Conread position: 20-617
Cow position: chrX:25324772-25324179 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 158

Conread position: 23-397
Cow position: chrX:25310204-25310578 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 242
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 152, 139

Conread position: 23-530
Cow position: chrX:13826718-13826211 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 308
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 170, 157

Conread position: 23-618
Cow position: chrX:25324853-25324258 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 23-828
Cow position: chrX:25325441-25324626 (view UCSC Genome Browser custom track)
Alignm length: 819
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 254

Conread position: 24-568
Cow position: chrX:25310037-25310581 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 79

Conread position: 24-617
Cow position: chrX:14181495-14180902 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 357
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 76, 62

Conread position: 24-638
Cow position: chrX:13826801-13826187 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 23

Conread position: 24-863
Cow position: chrX:25325272-25324424 (view UCSC Genome Browser custom track)
Alignm length: 852
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 398

Conread position: 44-336
Cow position: chrX:29045744-29045452 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 12, 17

Conread position: 44-586
Cow position: chrX:13826949-13826407 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 333
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 63, 58

Conread position: 45-632
Cow position: chrX:14181558-14180971 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 41

Conread position: 47-627
Cow position: chrX:13826862-13826282 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 48

Conread position: 48-632
Cow position: chrX:14181639-14181055 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 47

Conread position: 50-587
Cow position: chrX:12627527-12628063 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 325
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 230, 127

Conread position: 51-493
Cow position: chrX:14181384-14180942 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 278
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 105-864
Cow position: chrX:25325779-25325011 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 73

Conread position: 118-502
Cow position: chrX:29045838-29045454 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 248
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 151-829
Cow position: chrX:13826926-13826239 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 118

Conread position: 184-829
Cow position: chrX:25309693-25310347 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 63

Conread position: 195-864
Cow position: chrX:29045359-29044684 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 27

Conread position: 202-861
Cow position: chrX:29045838-29045191 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 60

Conread position: 215-861
Cow position: chrX:14181640-14180985 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 385
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 136

Conread position: 227-627
Cow position: chrX:13826934-13826534 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 251
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 210, 205

Show alignments to all cow chromosomes.