Cow genome map


           Conread name:
           Ss1.1-Lng1-LNG010081E09.5
        

               Conread position:
               539-708
               

               Cow position:
               chr5:46782877-46782709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               540-691
               

               Cow position:
               chr5:67099253-67099404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               540-708
               

               Cow position:
               chr5:46272607-46272442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               732-1011
               

               Cow position:
               chr5:64041315-64041594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 104
               

               Conread position:
               732-1020
               

               Cow position:
               chr5:67099679-67099964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 172
               

               Conread position:
               818-1020
               

               Cow position:
               chr5:24889303-24889506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               59, 0
               
Show alignments to all cow chromosomes.