Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010091E04.5.5 |
| Conread position: | 1-127 |
| Cow position: | chr22:42333218-42333091 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 152-316 |
| Cow position: | chr22:42331444-42331280 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 152-316 |
| Cow position: | chr22:42354074-42353910 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 316-421 |
| Cow position: | chr22:42331191-42331086 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 417-608 |
| Cow position: | chr22:42330837-42330645 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 0 |
| Conread position: | 578-698 |
| Cow position: | chr22:42330138-42330018 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 696-827 |
| Cow position: | chr22:42328994-42328863 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 122 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 821-940 |
| Cow position: | chr22:42328566-42328447 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 938-1118 |
| Cow position: | chr22:42328251-42328071 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 154 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1110-1238 |
| Cow position: | chr22:42327494-42327366 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 117 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1235-1418 |
| Cow position: | chr22:42327108-42326925 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1254-1424 |
| Cow position: | chr22:42347831-42347661 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1413-1604 |
| Cow position: | chr22:42347410-42347219 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1416-1604 |
| Cow position: | chr22:42325222-42325034 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1603-1743 |
| Cow position: | chr22:42324914-42324774 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 132 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1743-1898 |
| Cow position: | chr22:42324108-42323953 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 141 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1973-2088 |
| Cow position: | chr22:42321812-42321697 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2085-2293 |
| Cow position: | chr22:42321212-42321004 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2292-2466 |
| Cow position: | chr22:42320320-42320146 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2300-2466 |
| Cow position: | chr22:42341737-42341571 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 44, 36 |
| Conread position: | 2453-2578 |
| Cow position: | chr22:42341023-42340898 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2462-2578 |
| Cow position: | chr22:42319958-42319842 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2575-2708 |
| Cow position: | chr22:42340746-42340613 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 2575-2820 |
| Cow position: | chr22:42319530-42319285 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.