Cow genome map


           Conread name:
           Ss1.1-Lng1-LNG010092E04.5
        

               Conread position:
               16-104
               

               Cow position:
               chr1:89279625-89279713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               157-265
               

               Cow position:
               chr1:89280696-89280804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               264-419
               

               Cow position:
               chr1:89281872-89282027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               140
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               479-679
               

               Cow position:
               chr1:89286865-89287065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               678-816
               

               Cow position:
               chr1:89288118-89288256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               125
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               815-1030
               

               Cow position:
               chr1:89291593-89291800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               855-1030
               

               Cow position:
               chr1:44516973-44517146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               22, 106
               
Show alignments to all cow chromosomes.