Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010102B09.5 |
| Conread position: | 1-430 |
| Cow position: | chr25:39196798-39197215 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 796-1125 |
| Cow position: | chr25:39197551-39197881 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 101, 30 |
| Conread position: | 1150-1395 |
| Cow position: | chr25:39197808-39198042 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 1413-1533 |
| Cow position: | chr25:39198642-39198763 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1530-1645 |
| Cow position: | chr25:39199160-39199275 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1640-1720 |
| Cow position: | chr25:39199594-39199674 (view UCSC Genome Browser custom track) |
| Alignm length: | 81 |
| Alignm identity: | 78 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1719-1846 |
| Cow position: | chr25:39200189-39200316 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 121 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1843-1985 |
| Cow position: | chr25:39201590-39201732 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 135 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1984-2062 |
| Cow position: | chr25:39202404-39202482 (view UCSC Genome Browser custom track) |
| Alignm length: | 79 |
| Alignm identity: | 74 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2063-2187 |
| Cow position: | chr25:39203337-39203461 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 116 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2186-2261 |
| Cow position: | chr25:39204203-39204278 (view UCSC Genome Browser custom track) |
| Alignm length: | 76 |
| Alignm identity: | 72 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2258-2469 |
| Cow position: | chr25:39205434-39205645 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2581-2717 |
| Cow position: | chr25:39207340-39207477 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 131 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 2707-2874 |
| Cow position: | chr25:39208154-39208322 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 154 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 2874-3003 |
| Cow position: | chr25:39208703-39208832 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3058-3181 |
| Cow position: | chr25:39209357-39209480 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3179-3375 |
| Cow position: | chr25:39210878-39211074 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3374-3647 |
| Cow position: | chr25:39214520-39214800 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 0 |
Show alignments to all cow chromosomes.