Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01A030055.5 |
| Conread position: | 229-424 |
| Cow position: | chr11:44884148-44883950 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 103 |
| Conread position: | 230-374 |
| Cow position: | chr11:71013253-71013110 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 46 |
| Conread position: | 230-379 |
| Cow position: | chr11:9714359-9714509 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 230-384 |
| Cow position: | chr11:12006230-12006075 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 76 |
| Conread position: | 230-403 |
| Cow position: | chr11:84742434-84742264 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 146, 26 |
| Conread position: | 230-418 |
| Cow position: | chr11:40643159-40642971 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 175 |
| Conread position: | 230-423 |
| Cow position: | chr11:13887562-13887758 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 230-423 |
| Cow position: | chr11:29622811-29623003 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 26, 110 |
| Conread position: | 230-423 |
| Cow position: | chr11:41562878-41562686 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 146, 38 |
| Conread position: | 230-428 |
| Cow position: | chr11:65682731-65682532 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 18, 159 |
| Conread position: | 230-428 |
| Cow position: | chr11:75370260-75370058 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 231-423 |
| Cow position: | chr11:25135577-25135382 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 231-430 |
| Cow position: | chr11:18921885-18922086 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 100 |
| Conread position: | 231-431 |
| Cow position: | chr11:85680124-85679923 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 234-397 |
| Cow position: | chr11:35150083-35150246 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 22, 34 |
| Conread position: | 234-421 |
| Cow position: | chr11:68276559-68276370 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 234-423 |
| Cow position: | chr11:64477599-64477782 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 234-428 |
| Cow position: | chr11:44924544-44924348 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 240-411 |
| Cow position: | chr11:43844789-43844958 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 135, 8 |
| Conread position: | 241-416 |
| Cow position: | chr11:13972244-13972419 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 136, 8 |
| Conread position: | 241-421 |
| Cow position: | chr11:6031518-6031335 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 243-421 |
| Cow position: | chr11:34572281-34572451 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 156, 124 |
| Conread position: | 248-428 |
| Cow position: | chr11:35240692-35240511 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 251-421 |
| Cow position: | chr11:16069603-16069771 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 103 |
| Conread position: | 251-423 |
| Cow position: | chr11:10807570-10807742 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 134, 65 |
| Conread position: | 251-425 |
| Cow position: | chr11:74193338-74193512 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 125, 38 |
| Conread position: | 252-418 |
| Cow position: | chr11:76603472-76603305 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 122, 0 |
Show alignments to all cow chromosomes.