Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01A030055.5 |
| Conread position: | 62-228 |
| Cow position: | chr16:42145403-42145244 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 116, 50 |
| Conread position: | 67-224 |
| Cow position: | chr16:9444430-9444585 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 223-423 |
| Cow position: | chr16:31618989-31619191 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 229-428 |
| Cow position: | chr16:3591515-3591708 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 74 |
| Conread position: | 229-428 |
| Cow position: | chr16:26422194-26422385 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 229-428 |
| Cow position: | chr16:42695584-42695783 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 146, 27 |
| Conread position: | 229-428 |
| Cow position: | chr16:49508936-49509135 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 102, 180 |
| Conread position: | 230-397 |
| Cow position: | chr16:25595420-25595589 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 230-422 |
| Cow position: | chr16:30582180-30582375 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 230-428 |
| Cow position: | chr16:14745079-14745278 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 62 |
| Conread position: | 230-428 |
| Cow position: | chr16:19041837-19041636 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 230-428 |
| Cow position: | chr16:49583154-49583349 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 230-429 |
| Cow position: | chr16:52308485-52308684 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 234-418 |
| Cow position: | chr16:34310876-34310690 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 234-422 |
| Cow position: | chr16:11132590-11132411 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 234-423 |
| Cow position: | chr16:46527731-46527919 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 5, 166 |
| Conread position: | 234-425 |
| Cow position: | chr16:41654728-41654919 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 236-423 |
| Cow position: | chr16:50036539-50036349 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 153 |
| Conread position: | 236-428 |
| Cow position: | chr16:30695366-30695561 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 242-421 |
| Cow position: | chr16:45802148-45801972 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 13, 120 |
| Conread position: | 248-423 |
| Cow position: | chr16:11018723-11018895 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 57 |
| Conread position: | 251-423 |
| Cow position: | chr16:20125047-20124874 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 77, 89 |
| Conread position: | 251-428 |
| Cow position: | chr16:52391394-52391216 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 90, 21 |
| Conread position: | 251-429 |
| Cow position: | chr16:52472576-52472757 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 107 |
| Conread position: | 252-446 |
| Cow position: | chr16:38609059-38609248 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 271-445 |
| Cow position: | chr16:28372385-28372558 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 105, 162 |
Show alignments to all cow chromosomes.