Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01A030055.5 |
| Conread position: | 228-428 |
| Cow position: | chr4:53144126-53143926 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 133 |
| Conread position: | 229-428 |
| Cow position: | chr4:19451286-19451486 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 28, 172 |
| Conread position: | 230-417 |
| Cow position: | chr4:43066123-43065940 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 142, 18 |
| Conread position: | 230-423 |
| Cow position: | chr4:26223101-26223295 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 106, 45 |
| Conread position: | 230-423 |
| Cow position: | chr4:45952058-45951863 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 230-428 |
| Cow position: | chr4:16246365-16246562 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 29, 176 |
| Conread position: | 230-428 |
| Cow position: | chr4:39222686-39222487 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 111 |
| Conread position: | 230-428 |
| Cow position: | chr4:44379991-44380188 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 230-428 |
| Cow position: | chr4:47457924-47457727 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 56, 34 |
| Conread position: | 231-421 |
| Cow position: | chr4:58671413-58671613 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 231-423 |
| Cow position: | chr4:11662971-11662778 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 26, 83 |
| Conread position: | 234-375 |
| Cow position: | chr4:61080849-61080707 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 234-396 |
| Cow position: | chr4:34007948-34008106 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 234-411 |
| Cow position: | chr4:49682955-49683126 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 142, 23 |
| Conread position: | 234-418 |
| Cow position: | chr4:66100145-66100325 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 145, 23 |
| Conread position: | 234-421 |
| Cow position: | chr4:14511813-14512000 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 142, 106 |
| Conread position: | 234-428 |
| Cow position: | chr4:34021100-34020910 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 94 |
| Conread position: | 234-430 |
| Cow position: | chr4:2670967-2670770 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 42, 22 |
| Conread position: | 234-431 |
| Cow position: | chr4:33049104-33049305 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 234-431 |
| Cow position: | chr4:65142357-65142560 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 235-423 |
| Cow position: | chr4:31937182-31936998 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 89, 21 |
| Conread position: | 241-423 |
| Cow position: | chr4:35122319-35122495 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 248-423 |
| Cow position: | chr4:9896874-9897054 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 251-421 |
| Cow position: | chr4:54828619-54828785 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 125, 17 |
| Conread position: | 251-428 |
| Cow position: | chr4:28286932-28286754 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 251-428 |
| Cow position: | chr4:67645703-67645879 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 124, 102 |
| Conread position: | 251-431 |
| Cow position: | chr4:35039186-35039366 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 125, 110 |
| Conread position: | 252-423 |
| Cow position: | chr4:1900457-1900287 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 125, 11 |
| Conread position: | 255-415 |
| Cow position: | chr4:2598523-2598684 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 86, 135 |
| Conread position: | 261-419 |
| Cow position: | chr4:59556363-59556515 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 266-411 |
| Cow position: | chr4:33295787-33295928 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 111, 9 |
| Conread position: | 272-373 |
| Cow position: | chr4:46192129-46192028 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.