Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01A030055.5 |
| Conread position: | 200-428 |
| Cow position: | chr5:60675230-60675004 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 176, 18 |
| Conread position: | 227-470 |
| Cow position: | chr5:29199849-29200095 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 25, 36 |
| Conread position: | 229-423 |
| Cow position: | chr5:49070111-49070302 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 124 |
| Conread position: | 229-428 |
| Cow position: | chr5:13989221-13989420 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 140 |
| Conread position: | 229-428 |
| Cow position: | chr5:62362908-62362707 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 229-431 |
| Cow position: | chr5:4438377-4438171 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 229-437 |
| Cow position: | chr5:5309163-5308963 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 230-373 |
| Cow position: | chr5:47593528-47593671 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 230-411 |
| Cow position: | chr5:30793524-30793341 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 230-428 |
| Cow position: | chr5:45608707-45608894 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 231-422 |
| Cow position: | chr5:45168070-45168262 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 231-428 |
| Cow position: | chr5:24639968-24640172 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 231-430 |
| Cow position: | chr5:20775741-20775937 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 234-421 |
| Cow position: | chr5:37714913-37715103 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 23, 30 |
| Conread position: | 234-421 |
| Cow position: | chr5:57965962-57966155 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 236-428 |
| Cow position: | chr5:2237744-2237936 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 165 |
| Conread position: | 248-423 |
| Cow position: | chr5:50991015-50990838 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 248-459 |
| Cow position: | chr5:67623808-67623592 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 164 |
| Conread position: | 251-397 |
| Cow position: | chr5:73141377-73141526 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 251-429 |
| Cow position: | chr5:55112905-55112726 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 263-428 |
| Cow position: | chr5:26893958-26894124 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 34, 156 |
| Conread position: | 265-437 |
| Cow position: | chr5:48132039-48131868 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 267-423 |
| Cow position: | chr5:53945766-53945611 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 109, 18 |
| Conread position: | 316-421 |
| Cow position: | chr5:49817143-49817037 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
Show alignments to all cow chromosomes.