Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01A030055.5 |
| Conread position: | 229-422 |
| Cow position: | chr6:36826457-36826263 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 28, 127 |
| Conread position: | 230-410 |
| Cow position: | chr6:14165014-14165193 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 154, 77 |
| Conread position: | 230-417 |
| Cow position: | chr6:48473523-48473333 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 230-423 |
| Cow position: | chr6:18462705-18462899 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 77 |
| Conread position: | 230-423 |
| Cow position: | chr6:38779376-38779568 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 13 |
| Conread position: | 230-446 |
| Cow position: | chr6:29503737-29503520 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 19, 202 |
| Conread position: | 231-416 |
| Cow position: | chr6:46263833-46264016 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 231-422 |
| Cow position: | chr6:48669430-48669622 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 170 |
| Conread position: | 234-406 |
| Cow position: | chr6:38981775-38981948 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 108, 22 |
| Conread position: | 234-414 |
| Cow position: | chr6:16505254-16505434 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 23, 116 |
| Conread position: | 234-430 |
| Cow position: | chr6:53380959-53380766 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 23, 46 |
| Conread position: | 235-423 |
| Cow position: | chr6:47527113-47526924 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 241-397 |
| Cow position: | chr6:49721255-49721097 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 100, 7 |
| Conread position: | 241-412 |
| Cow position: | chr6:66514935-66514764 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 241-412 |
| Cow position: | chr6:66519892-66519721 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 241-423 |
| Cow position: | chr6:28141880-28141703 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 136, 15 |
| Conread position: | 248-406 |
| Cow position: | chr6:23008376-23008534 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 248-415 |
| Cow position: | chr6:26030692-26030528 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 130, 8 |
| Conread position: | 251-422 |
| Cow position: | chr6:23811379-23811207 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 251-431 |
| Cow position: | chr6:42253082-42252900 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 251-450 |
| Cow position: | chr6:44899884-44899687 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 128, 25 |
| Conread position: | 252-423 |
| Cow position: | chr6:7817376-7817203 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 256-423 |
| Cow position: | chr6:3515813-3515645 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 118, 0 |
Show alignments to all cow chromosomes.