Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01A030055.5 |
| Conread position: | 62-229 |
| Cow position: | chr8:14065761-14065921 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 228-418 |
| Cow position: | chr8:39636068-39635874 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 229-418 |
| Cow position: | chr8:36709529-36709718 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 147, 20 |
| Conread position: | 229-423 |
| Cow position: | chr8:38895837-38895644 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 230-406 |
| Cow position: | chr8:4494004-4494182 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 230-406 |
| Cow position: | chr8:6820753-6820927 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 148, 72 |
| Conread position: | 230-417 |
| Cow position: | chr8:10346880-10347071 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 230-423 |
| Cow position: | chr8:20870251-20870446 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 231-395 |
| Cow position: | chr8:42000180-42000345 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 21, 115 |
| Conread position: | 231-418 |
| Cow position: | chr8:30105692-30105509 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 231-422 |
| Cow position: | chr8:47274834-47275025 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 177 |
| Conread position: | 231-423 |
| Cow position: | chr8:45072723-45072533 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 25, 143 |
| Conread position: | 231-439 |
| Cow position: | chr8:25610690-25610899 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 54, 25 |
| Conread position: | 234-360 |
| Cow position: | chr8:58635725-58635852 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 234-396 |
| Cow position: | chr8:54170439-54170601 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 118 |
| Conread position: | 234-400 |
| Cow position: | chr8:23927606-23927770 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 234-418 |
| Cow position: | chr8:5389935-5390121 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 149 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 234-427 |
| Cow position: | chr8:31982721-31982534 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 234-428 |
| Cow position: | chr8:5663371-5663565 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 113 |
| Conread position: | 234-430 |
| Cow position: | chr8:6376776-6376971 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 22, 120 |
| Conread position: | 234-430 |
| Cow position: | chr8:61576706-61576896 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 79 |
| Conread position: | 235-395 |
| Cow position: | chr8:24671260-24671421 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 127 |
| Conread position: | 235-397 |
| Cow position: | chr8:40272768-40272933 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 242-421 |
| Cow position: | chr8:39619804-39619626 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 243-417 |
| Cow position: | chr8:37998514-37998691 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 113 |
| Conread position: | 243-421 |
| Cow position: | chr8:54380393-54380565 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 12, 35 |
| Conread position: | 248-423 |
| Cow position: | chr8:39461715-39461541 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 251-418 |
| Cow position: | chr8:25136112-25135941 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 251-428 |
| Cow position: | chr8:31624996-31624818 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 125, 162 |
| Conread position: | 256-428 |
| Cow position: | chr8:41678723-41678551 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 120, 106 |
Show alignments to all cow chromosomes.