Cow genome map

Conread name: Ss1.1-LyN1-MLN01A070058.5

Conread position: 542-772
Cow position: chr15:40490021-40490251 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 49

Conread position: 562-764
Cow position: chr15:14474444-14474242 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 28

Conread position: 566-776
Cow position: chr15:19002182-19002393 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 71

Conread position: 569-783
Cow position: chr15:8715088-8715298 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 177, 0

Conread position: 570-741
Cow position: chr15:50265392-50265563 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 21

Conread position: 570-764
Cow position: chr15:16018129-16017935 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 7, 21

Conread position: 573-764
Cow position: chr15:28099203-28099014 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 9, 120

Conread position: 573-776
Cow position: chr15:52792028-52791830 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 28

Conread position: 574-767
Cow position: chr15:25877530-25877339 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 574-775
Cow position: chr15:12045449-12045650 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 104, 14

Conread position: 576-744
Cow position: chr15:9838002-9837835 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 576-776
Cow position: chr15:40562594-40562793 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 5, 115

Conread position: 576-776
Cow position: chr15:52747613-52747416 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 24

Conread position: 577-765
Cow position: chr15:44436840-44436658 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 128

Conread position: 577-776
Cow position: chr15:3026710-3026915 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 577-783
Cow position: chr15:41475744-41475945 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 76

Conread position: 578-772
Cow position: chr15:50333065-50332869 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 113, 38

Conread position: 578-776
Cow position: chr15:2931481-2931681 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 49

Conread position: 578-776
Cow position: chr15:34223951-34223757 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 182, 132

Conread position: 583-758
Cow position: chr15:34284330-34284502 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 110

Conread position: 583-767
Cow position: chr15:25350049-25349873 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 84

Conread position: 583-772
Cow position: chr15:36391755-36391565 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 583-776
Cow position: chr15:7430051-7429856 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 583-776
Cow position: chr15:42381008-42380818 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 163, 0

Conread position: 584-767
Cow position: chr15:48372849-48373027 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 584-772
Cow position: chr15:21941768-21941954 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 585-764
Cow position: chr15:38386668-38386488 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 585-767
Cow position: chr15:85168-85347 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 585-776
Cow position: chr15:26618018-26617825 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 586-764
Cow position: chr15:518628-518452 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 586-764
Cow position: chr15:38162076-38161902 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 586-783
Cow position: chr15:26522748-26522941 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 21

Conread position: 586-784
Cow position: chr15:40798337-40798535 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 5

Conread position: 587-764
Cow position: chr15:22443909-22444085 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 6, 13

Conread position: 587-776
Cow position: chr15:8665524-8665717 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 102, 0

Conread position: 588-718
Cow position: chr15:8549408-8549537 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 48

Conread position: 588-731
Cow position: chr15:39621413-39621266 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 588-745
Cow position: chr15:46364847-46364690 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 114, 48

Conread position: 588-746
Cow position: chr15:28924680-28924838 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 108, 121

Conread position: 588-746
Cow position: chr15:39619217-39619059 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 588-747
Cow position: chr15:31949079-31948922 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 588-751
Cow position: chr15:864253-864095 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 588-753
Cow position: chr15:52432418-52432251 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 88

Conread position: 588-755
Cow position: chr15:6102086-6102250 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 588-755
Cow position: chr15:33382657-33382489 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 145, 0

Conread position: 588-755
Cow position: chr15:38935483-38935315 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 98, 52

Conread position: 588-755
Cow position: chr15:52482753-52482918 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 588-755
Cow position: chr15:53164096-53163931 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 588-759
Cow position: chr15:24616646-24616474 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 54, 48

Conread position: 588-760
Cow position: chr15:2953059-2953227 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 588-762
Cow position: chr15:17196223-17196049 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 48

Conread position: 588-762
Cow position: chr15:39286334-39286507 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 588-762
Cow position: chr15:48351199-48351034 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 588-764
Cow position: chr15:9921693-9921862 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 588-764
Cow position: chr15:40379289-40379114 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 588-764
Cow position: chr15:48052529-48052696 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 116, 0

Conread position: 588-767
Cow position: chr15:10245922-10246096 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 54, 28

Conread position: 588-767
Cow position: chr15:21893853-21893679 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 588-767
Cow position: chr15:27900433-27900606 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 6, 137

Conread position: 588-767
Cow position: chr15:32324133-32324309 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 588-767
Cow position: chr15:40231196-40231017 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 588-770
Cow position: chr15:20370380-20370556 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 588-772
Cow position: chr15:8444547-8444366 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 588-772
Cow position: chr15:12913425-12913605 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 588-772
Cow position: chr15:16246671-16246488 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 588-772
Cow position: chr15:17084284-17084100 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 588-772
Cow position: chr15:20459233-20459417 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 588-772
Cow position: chr15:31637376-31637189 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 588-772
Cow position: chr15:37381699-37381523 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 588-773
Cow position: chr15:16667428-16667605 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 588-775
Cow position: chr15:4500778-4500589 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 103, 0

Conread position: 588-776
Cow position: chr15:1857799-1857616 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 588-776
Cow position: chr15:2968411-2968224 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 588-776
Cow position: chr15:4418325-4418512 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 56, 48

Conread position: 588-776
Cow position: chr15:6905608-6905429 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 588-776
Cow position: chr15:8127988-8127799 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 89

Conread position: 588-776
Cow position: chr15:11995952-11996138 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 64

Conread position: 588-776
Cow position: chr15:15154375-15154189 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 111, 64

Conread position: 588-776
Cow position: chr15:16112475-16112284 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 588-776
Cow position: chr15:17124395-17124581 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 15, 0

Conread position: 588-776
Cow position: chr15:23572611-23572799 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 588-776
Cow position: chr15:24462602-24462412 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 588-776
Cow position: chr15:25595453-25595637 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 588-776
Cow position: chr15:29026805-29026993 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 54, 44

Conread position: 588-776
Cow position: chr15:31928821-31929008 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 143, 105

Conread position: 588-776
Cow position: chr15:35419516-35419704 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 49

Conread position: 588-776
Cow position: chr15:36435280-36435092 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 588-776
Cow position: chr15:37970881-37970693 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 588-776
Cow position: chr15:38420478-38420665 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 588-776
Cow position: chr15:38652526-38652713 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 66, 0

Conread position: 588-776
Cow position: chr15:41320878-41321062 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 34, 109

Conread position: 588-776
Cow position: chr15:43626544-43626354 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 119, 101

Conread position: 588-776
Cow position: chr15:44658435-44658256 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 588-779
Cow position: chr15:21821849-21822040 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 588-780
Cow position: chr15:4485229-4485033 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 48

Conread position: 588-783
Cow position: chr15:11564371-11564182 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 588-783
Cow position: chr15:21943130-21942934 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 186, 0

Conread position: 588-783
Cow position: chr15:31857666-31857473 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 48

Conread position: 588-783
Cow position: chr15:50163185-50162997 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 187, 80

Conread position: 588-784
Cow position: chr15:17233268-17233068 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 588-784
Cow position: chr15:39473860-39474053 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 589-753
Cow position: chr15:13701695-13701859 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 589-753
Cow position: chr15:16530694-16530858 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 589-753
Cow position: chr15:31283459-31283295 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 589-753
Cow position: chr15:38806428-38806592 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 589-763
Cow position: chr15:25571735-25571909 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 589-764
Cow position: chr15:698056-697881 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 589-764
Cow position: chr15:5626960-5627135 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 589-764
Cow position: chr15:16439757-16439932 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 589-764
Cow position: chr15:30001768-30001598 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 115

Conread position: 589-764
Cow position: chr15:34552815-34552989 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 589-764
Cow position: chr15:36776344-36776171 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 589-764
Cow position: chr15:53028437-53028264 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 589-765
Cow position: chr15:9465751-9465575 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 589-767
Cow position: chr15:8679682-8679860 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 589-767
Cow position: chr15:27230836-27230662 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 53, 47

Conread position: 589-768
Cow position: chr15:4886179-4886001 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 131, 0

Conread position: 589-768
Cow position: chr15:40947299-40947479 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 589-772
Cow position: chr15:6082523-6082706 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 589-772
Cow position: chr15:7478922-7479104 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 46

Conread position: 589-772
Cow position: chr15:39892751-39892934 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 589-772
Cow position: chr15:40014928-40015111 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 589-776
Cow position: chr15:4295837-4295650 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 173

Conread position: 589-776
Cow position: chr15:31137392-31137575 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 589-776
Cow position: chr15:39299241-39299427 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 589-776
Cow position: chr15:45479076-45478889 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 85

Conread position: 589-780
Cow position: chr15:9314800-9314613 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 589-783
Cow position: chr15:25333305-25333498 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 186, 56

Conread position: 589-784
Cow position: chr15:11614018-11614209 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 171, 0

Conread position: 589-784
Cow position: chr15:21608646-21608841 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 81

Conread position: 589-787
Cow position: chr15:22938688-22938888 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 50, 40

Conread position: 590-742
Cow position: chr15:36793421-36793573 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 590-754
Cow position: chr15:24031273-24031109 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 99, 112

Conread position: 590-762
Cow position: chr15:9622256-9622084 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 43

Conread position: 590-764
Cow position: chr15:26896621-26896797 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 43

Conread position: 590-764
Cow position: chr15:29928039-29927866 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 590-767
Cow position: chr15:37069813-37069989 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 590-772
Cow position: chr15:35642087-35641906 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 590-776
Cow position: chr15:5408821-5409004 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 106

Conread position: 590-776
Cow position: chr15:12723163-12722974 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 590-776
Cow position: chr15:21903337-21903517 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 590-776
Cow position: chr15:33693296-33693482 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 590-776
Cow position: chr15:35577276-35577083 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 590-783
Cow position: chr15:7750839-7751031 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 127, 0

Conread position: 590-784
Cow position: chr15:47844020-47844204 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 590-795
Cow position: chr15:28047682-28047892 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 13

Conread position: 590-819
Cow position: chr15:22532325-22532099 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 46

Conread position: 591-764
Cow position: chr15:20534380-20534551 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 591-764
Cow position: chr15:43673871-43674044 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 130

Conread position: 591-776
Cow position: chr15:21710036-21710219 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 591-776
Cow position: chr15:25208685-25208869 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 591-776
Cow position: chr15:37777365-37777169 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 591-777
Cow position: chr15:15177388-15177206 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 591-784
Cow position: chr15:16415371-16415180 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 158

Conread position: 592-764
Cow position: chr15:4861833-4862005 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 592-776
Cow position: chr15:44119395-44119579 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 142

Conread position: 593-776
Cow position: chr15:19553854-19554036 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 90, 0

Conread position: 593-776
Cow position: chr15:44810139-44809956 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 594-759
Cow position: chr15:38837818-38837651 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 594-776
Cow position: chr15:4333847-4334020 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 594-776
Cow position: chr15:10400202-10400385 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 595-781
Cow position: chr15:19173802-19173617 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 177

Conread position: 597-752
Cow position: chr15:43851518-43851673 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 597-755
Cow position: chr15:16489430-16489588 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 597-764
Cow position: chr15:41624828-41624995 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 597-776
Cow position: chr15:25365996-25366175 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 8, 38

Conread position: 598-764
Cow position: chr15:36605155-36605321 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 156, 162

Conread position: 599-776
Cow position: chr15:840085-840257 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 69, 11

Conread position: 602-784
Cow position: chr15:33729954-33729767 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 603-776
Cow position: chr15:5964042-5964223 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 31

Conread position: 603-781
Cow position: chr15:19771196-19771022 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 603-783
Cow position: chr15:17621258-17621437 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 80, 67

Conread position: 604-753
Cow position: chr15:13554168-13554019 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 604-763
Cow position: chr15:36457564-36457714 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 37

Conread position: 604-763
Cow position: chr15:50552474-50552631 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 604-765
Cow position: chr15:16644727-16644887 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 32

Conread position: 604-776
Cow position: chr15:4919007-4919180 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 604-776
Cow position: chr15:44089104-44089275 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 605-764
Cow position: chr15:43914037-43914196 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 607-764
Cow position: chr15:32022261-32022415 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 42

Conread position: 610-776
Cow position: chr15:18942083-18941924 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 610-776
Cow position: chr15:20566184-20566018 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 610-776
Cow position: chr15:26127773-26127943 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 610-776
Cow position: chr15:36643796-36643956 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 610-777
Cow position: chr15:48095417-48095245 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 613-746
Cow position: chr15:12785484-12785347 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 613-782
Cow position: chr15:30956273-30956440 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 617-755
Cow position: chr15:15680795-15680933 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 61, 57

Conread position: 617-772
Cow position: chr15:27555604-27555760 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 617-775
Cow position: chr15:22242450-22242293 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 617-776
Cow position: chr15:4284420-4284261 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 617-776
Cow position: chr15:25696251-25696409 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 617-776
Cow position: chr15:45133894-45134053 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 617-781
Cow position: chr15:25358281-25358118 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 19

Conread position: 619-759
Cow position: chr15:14760593-14760733 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 619-776
Cow position: chr15:42888788-42888945 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 620-776
Cow position: chr15:50953622-50953774 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 143, 19

Conread position: 620-784
Cow position: chr15:16657516-16657351 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 149, 0

Conread position: 621-776
Cow position: chr15:26380702-26380857 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 625-767
Cow position: chr15:45386-45527 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 625-776
Cow position: chr15:20905994-20906139 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 626-776
Cow position: chr15:25667185-25667335 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 10

Conread position: 634-783
Cow position: chr15:51831760-51831908 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 132, 0

Conread position: 646-776
Cow position: chr15:36539961-36539834 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 653-776
Cow position: chr15:40159635-40159758 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 658-784
Cow position: chr15:37237674-37237550 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 662-776
Cow position: chr15:20649569-20649455 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 668-781
Cow position: chr15:42142871-42142759 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 106, 0

Show alignments to all cow chromosomes.