Cow genome map

Conread name: Ss1.1-LyN1-MLN01A070058.5

Conread position: 559-776
Cow position:
Alignm length: 218
Alignm identity: 146
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 142, 0

Conread position: 563-785
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 570-755
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 7, 19

Conread position: 574-776
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 33

Conread position: 574-784
Cow position:
Alignm length: 211
Alignm identity: 138
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 578-829
Cow position:
Alignm length: 252
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 582-764
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 23, 55

Conread position: 582-767
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 71

Conread position: 582-772
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 82, 6

Conread position: 583-779
Cow position:
Alignm length: 197
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 583-783
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 114, 0

Conread position: 585-749
Cow position:
Alignm length: 165
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 154, 0

Conread position: 585-763
Cow position:
Alignm length: 179
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 585-783
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 166

Conread position: 587-753
Cow position:
Alignm length: 167
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 587-772
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 588-755
Cow position:
Alignm length: 168
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 588-762
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 588-762
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 48

Conread position: 588-763
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 588-764
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 105, 64

Conread position: 588-764
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 588-772
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 588-772
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 588-772
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 588-772
Cow position:
Alignm length: 188
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 112, 169

Conread position: 588-772
Cow position:
Alignm length: 185
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 588-772
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 588-774
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 588-776
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 36

Conread position: 588-776
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 175, 52

Conread position: 588-776
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 81, 88

Conread position: 588-776
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 96, 87

Conread position: 588-776
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 89, 0

Conread position: 588-776
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 95, 15

Conread position: 588-776
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 95, 22

Conread position: 588-776
Cow position:
Alignm length: 189
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 588-776
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 588-777
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 588-781
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 588-782
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 190, 52

Conread position: 588-783
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 44

Conread position: 588-784
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 160, 0

Conread position: 588-789
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 185, 0

Conread position: 588-811
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 189, 0

Conread position: 589-741
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 589-762
Cow position:
Alignm length: 174
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 589-764
Cow position:
Alignm length: 176
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 589-764
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 165, 97

Conread position: 589-764
Cow position:
Alignm length: 177
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 159, 0

Conread position: 589-767
Cow position:
Alignm length: 179
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 589-767
Cow position:
Alignm length: 179
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 589-767
Cow position:
Alignm length: 179
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 589-768
Cow position:
Alignm length: 180
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 589-772
Cow position:
Alignm length: 184
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 589-772
Cow position:
Alignm length: 184
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 589-773
Cow position:
Alignm length: 185
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 589-776
Cow position:
Alignm length: 188
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 589-830
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 589-840
Cow position:
Alignm length: 253
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 229, 237

Conread position: 590-750
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 7

Conread position: 590-763
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 590-764
Cow position:
Alignm length: 175
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 590-764
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 590-772
Cow position:
Alignm length: 183
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 590-772
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 57, 13

Conread position: 590-776
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 590-776
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 590-776
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 590-776
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 143, 50

Conread position: 590-776
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 114, 0

Conread position: 590-783
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 184, 0

Conread position: 590-783
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 591-755
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 106, 19

Conread position: 591-762
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 42

Conread position: 591-764
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 591-772
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 75, 25

Conread position: 593-749
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 91, 40

Conread position: 593-776
Cow position:
Alignm length: 184
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 594-764
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 597-737
Cow position:
Alignm length: 141
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 597-767
Cow position:
Alignm length: 173
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 7

Conread position: 597-772
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 597-776
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 599-764
Cow position:
Alignm length: 168
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 599-767
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 603-764
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 138, 0

Conread position: 604-762
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 604-764
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 604-764
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 77

Conread position: 604-764
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 604-772
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 31

Conread position: 604-772
Cow position:
Alignm length: 169
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 604-772
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 138

Conread position: 604-776
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 142, 0

Conread position: 604-776
Cow position:
Alignm length: 173
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 604-785
Cow position:
Alignm length: 183
Alignm identity: 126
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 78, 69

Conread position: 605-772
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 605-776
Cow position:
Alignm length: 172
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 610-772
Cow position:
Alignm length: 163
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 610-775
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 10

Conread position: 610-776
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 610-783
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 145, 0

Conread position: 613-767
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 29, 23

Conread position: 617-776
Cow position:
Alignm length: 160
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 617-776
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 66

Conread position: 618-768
Cow position:
Alignm length: 151
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 621-767
Cow position:
Alignm length: 147
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 621-772
Cow position:
Alignm length: 153
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 15

Conread position: 621-776
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 12

Conread position: 623-776
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 625-763
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 626-783
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 647-772
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 650-758
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 660-783
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 663-776
Cow position:
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.