Cow genome map

Conread name: Ss1.1-LyN1-MLN01A070058.5

Conread position: 536-764
Cow position: chr28:118576-118806 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 138
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 124, 0

Conread position: 548-776
Cow position: chr28:16200766-16200536 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 22

Conread position: 551-764
Cow position: chr28:2801207-2801419 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 40

Conread position: 558-776
Cow position: chr28:3726222-3726004 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 23, 135

Conread position: 567-767
Cow position: chr28:15295234-15295433 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 75, 69

Conread position: 569-764
Cow position: chr28:5552715-5552515 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 574-784
Cow position: chr28:7350659-7350863 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 192, 120

Conread position: 576-733
Cow position: chr28:13448131-13448285 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 578-776
Cow position: chr28:4013093-4013287 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 578-783
Cow position: chr28:21868466-21868668 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 103, 123

Conread position: 578-783
Cow position: chr28:33884411-33884614 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 142, 67

Conread position: 580-746
Cow position: chr28:11559620-11559459 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 582-766
Cow position: chr28:13160533-13160349 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 115, 94

Conread position: 582-767
Cow position: chr28:4870789-4870601 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 100, 9

Conread position: 582-776
Cow position: chr28:4158968-4159167 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 118, 197

Conread position: 582-776
Cow position: chr28:21765968-21766159 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 164, 0

Conread position: 583-772
Cow position: chr28:19039005-19038818 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 585-776
Cow position: chr28:10767393-10767587 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 585-776
Cow position: chr28:12598355-12598540 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 585-776
Cow position: chr28:20173855-20174042 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 93, 71

Conread position: 585-776
Cow position: chr28:23616423-23616609 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 586-746
Cow position: chr28:11006743-11006903 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 588-742
Cow position: chr28:25459772-25459923 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 588-744
Cow position: chr28:4022692-4022848 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 588-753
Cow position: chr28:4138652-4138486 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 588-755
Cow position: chr28:2825438-2825605 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 588-759
Cow position: chr28:3200478-3200649 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 588-759
Cow position: chr28:8259647-8259819 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 588-762
Cow position: chr28:13356353-13356176 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 588-763
Cow position: chr28:1383260-1383081 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 588-764
Cow position: chr28:117744-117566 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 72, 0

Conread position: 588-764
Cow position: chr28:3011250-3011075 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 31

Conread position: 588-764
Cow position: chr28:3406396-3406220 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 588-764
Cow position: chr28:7644759-7644936 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 49, 63

Conread position: 588-764
Cow position: chr28:11307499-11307326 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 148

Conread position: 588-764
Cow position: chr28:12973900-12974076 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 588-764
Cow position: chr28:13133651-13133827 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 588-764
Cow position: chr28:14645087-14644910 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 588-764
Cow position: chr28:27218342-27218517 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 588-765
Cow position: chr28:20397351-20397173 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 157, 101

Conread position: 588-767
Cow position: chr28:5273411-5273232 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 588-767
Cow position: chr28:6321836-6322014 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 129, 69

Conread position: 588-767
Cow position: chr28:7697959-7697784 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 588-772
Cow position: chr28:751246-751428 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 588-772
Cow position: chr28:4307878-4307693 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 588-772
Cow position: chr28:5630117-5630299 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 588-772
Cow position: chr28:8716369-8716180 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 104, 0

Conread position: 588-772
Cow position: chr28:11866646-11866468 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 588-772
Cow position: chr28:14242712-14242896 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 98

Conread position: 588-772
Cow position: chr28:15362598-15362778 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 92, 117

Conread position: 588-772
Cow position: chr28:24672284-24672468 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 588-772
Cow position: chr28:32014803-32014985 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 122, 0

Conread position: 588-775
Cow position: chr28:4185925-4186106 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 588-776
Cow position: chr28:659276-659083 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 115, 133

Conread position: 588-776
Cow position: chr28:1655075-1654886 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 588-776
Cow position: chr28:4643751-4643566 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 126, 0

Conread position: 588-776
Cow position: chr28:5144502-5144310 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 588-776
Cow position: chr28:7008959-7008777 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 588-776
Cow position: chr28:8347750-8347938 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 72, 68

Conread position: 588-776
Cow position: chr28:10196846-10196666 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 588-776
Cow position: chr28:10615927-10615746 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 588-776
Cow position: chr28:10845127-10845306 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 588-776
Cow position: chr28:11059519-11059695 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 588-776
Cow position: chr28:11398778-11398590 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 588-776
Cow position: chr28:11827707-11827892 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 588-776
Cow position: chr28:17680641-17680829 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 588-776
Cow position: chr28:18474666-18474855 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 124, 52

Conread position: 588-776
Cow position: chr28:21103806-21103616 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 121, 12

Conread position: 588-776
Cow position: chr28:23460166-23460348 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 35, 41

Conread position: 588-776
Cow position: chr28:26810698-26810885 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 588-776
Cow position: chr28:26820258-26820072 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 16

Conread position: 588-776
Cow position: chr28:27445554-27445371 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 82, 117

Conread position: 588-781
Cow position: chr28:34230247-34230439 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 185, 0

Conread position: 588-783
Cow position: chr28:4073988-4074186 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 117

Conread position: 588-783
Cow position: chr28:22085523-22085335 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 110, 0

Conread position: 588-784
Cow position: chr28:6935160-6934964 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 55

Conread position: 588-784
Cow position: chr28:19262568-19262372 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 588-791
Cow position: chr28:5231957-5232158 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 166, 86

Conread position: 588-804
Cow position: chr28:7413678-7413896 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 589-710
Cow position: chr28:11365507-11365388 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 589-753
Cow position: chr28:4440316-4440480 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 589-753
Cow position: chr28:13048264-13048100 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 589-763
Cow position: chr28:13245581-13245755 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 589-763
Cow position: chr28:26264847-26265021 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 589-764
Cow position: chr28:5403023-5402851 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 47

Conread position: 589-764
Cow position: chr28:19128149-19127980 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 589-764
Cow position: chr28:23262432-23262258 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 589-765
Cow position: chr28:17071357-17071533 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 589-767
Cow position: chr28:34463934-34464112 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 589-772
Cow position: chr28:5673895-5674072 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 110

Conread position: 589-776
Cow position: chr28:3484600-3484790 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 47

Conread position: 589-781
Cow position: chr28:27313712-27313519 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 185, 0

Conread position: 589-783
Cow position: chr28:13527214-13527409 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 71, 162

Conread position: 589-785
Cow position: chr28:5236584-5236384 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 115, 191

Conread position: 589-791
Cow position: chr28:26340352-26340553 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 590-764
Cow position: chr28:11058023-11057851 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 164, 20

Conread position: 590-764
Cow position: chr28:11562226-11562051 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 54

Conread position: 590-764
Cow position: chr28:12933709-12933544 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 106, 0

Conread position: 590-764
Cow position: chr28:25827710-25827536 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 45

Conread position: 590-765
Cow position: chr28:18608347-18608172 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 590-772
Cow position: chr28:6563877-6563694 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 590-772
Cow position: chr28:17620339-17620159 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 590-772
Cow position: chr28:20968559-20968376 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 590-776
Cow position: chr28:5437064-5436882 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 590-776
Cow position: chr28:5609896-5609713 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 184, 101

Conread position: 590-776
Cow position: chr28:10958823-10959003 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 590-776
Cow position: chr28:11798758-11798572 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 103, 86

Conread position: 590-781
Cow position: chr28:11411513-11411330 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 590-783
Cow position: chr28:11346466-11346278 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 93, 0

Conread position: 591-763
Cow position: chr28:26743648-26743822 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 591-767
Cow position: chr28:10480791-10480608 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 51

Conread position: 591-772
Cow position: chr28:2892274-2892456 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 591-776
Cow position: chr28:9705675-9705860 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 18

Conread position: 591-776
Cow position: chr28:13371125-13370935 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 45

Conread position: 591-776
Cow position: chr28:18761981-18761804 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 591-781
Cow position: chr28:26826243-26826433 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 178, 12

Conread position: 591-785
Cow position: chr28:25973561-25973754 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 183, 0

Conread position: 591-809
Cow position: chr28:28602774-28602989 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 151, 0

Conread position: 592-784
Cow position: chr28:26982715-26982522 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 178, 119

Conread position: 594-759
Cow position: chr28:18369989-18369826 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 9

Conread position: 594-764
Cow position: chr28:27721723-27721888 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 594-783
Cow position: chr28:10252892-10252705 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 89, 0

Conread position: 597-767
Cow position: chr28:19586195-19586365 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 597-772
Cow position: chr28:2077528-2077701 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 103, 0

Conread position: 597-776
Cow position: chr28:10053297-10053128 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 598-764
Cow position: chr28:12951446-12951608 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 598-772
Cow position: chr28:4163555-4163380 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 598-789
Cow position: chr28:21744743-21744928 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 7, 107

Conread position: 599-768
Cow position: chr28:19117999-19118168 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 86

Conread position: 599-775
Cow position: chr28:26868121-26867951 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 599-778
Cow position: chr28:3759020-3759203 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 600-762
Cow position: chr28:3445450-3445290 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 25

Conread position: 602-776
Cow position: chr28:5199853-5200031 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 38

Conread position: 603-764
Cow position: chr28:4282457-4282297 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 80, 0

Conread position: 603-764
Cow position: chr28:15272239-15272078 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 39, 33

Conread position: 603-772
Cow position: chr28:6283458-6283290 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 34

Conread position: 603-772
Cow position: chr28:10495267-10495100 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 142, 0

Conread position: 603-778
Cow position: chr28:8827194-8827370 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 604-742
Cow position: chr28:8167319-8167182 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 72

Conread position: 604-763
Cow position: chr28:3729984-3729829 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 138, 0

Conread position: 604-776
Cow position: chr28:8787575-8787743 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 33

Conread position: 604-776
Cow position: chr28:17739857-17740029 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 605-776
Cow position: chr28:28765867-28765699 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 143, 0

Conread position: 609-765
Cow position: chr28:8656126-8655973 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 610-759
Cow position: chr28:6301122-6301271 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 610-764
Cow position: chr28:8358938-8359092 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 610-765
Cow position: chr28:21363781-21363933 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 136, 0

Conread position: 610-772
Cow position: chr28:17738112-17737950 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 610-775
Cow position: chr28:12672424-12672258 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 610-820
Cow position: chr28:31223520-31223311 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 75

Conread position: 613-752
Cow position: chr28:8112230-8112090 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 617-755
Cow position: chr28:13195703-13195567 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 617-776
Cow position: chr28:24698738-24698897 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 617-776
Cow position: chr28:34830202-34830358 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 127, 0

Conread position: 617-811
Cow position: chr28:4230859-4231048 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 618-772
Cow position: chr28:19994901-19994746 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 618-776
Cow position: chr28:3494404-3494565 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 619-772
Cow position: chr28:7503928-7504081 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 72

Conread position: 619-775
Cow position: chr28:16857057-16856903 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 621-772
Cow position: chr28:22308693-22308844 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 15

Conread position: 621-776
Cow position: chr28:16419577-16419729 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 621-784
Cow position: chr28:21263209-21263367 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 156, 83

Conread position: 621-795
Cow position: chr28:30922008-30921834 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 622-776
Cow position: chr28:14657766-14657920 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 625-763
Cow position: chr28:3311168-3311030 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 625-772
Cow position: chr28:7523360-7523215 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 625-784
Cow position: chr28:24767460-24767620 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 120, 135

Conread position: 639-767
Cow position: chr28:8141725-8141853 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 105, 93

Conread position: 642-784
Cow position: chr28:8165143-8165002 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 0

Conread position: 649-832
Cow position: chr28:16964887-16964704 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 653-764
Cow position: chr28:10896319-10896433 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 0

Show alignments to all cow chromosomes.