Cow genome map

Conread name: Ss1.1-LyN1-MLN01A070058.5

Conread position: 561-759
Cow position: chrX:5876123-5876314 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 564-753
Cow position: chrX:1396133-1396322 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 37

Conread position: 565-762
Cow position: chrX:31948916-31948720 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 565-767
Cow position: chrX:30962859-30962656 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 25

Conread position: 567-776
Cow position: chrX:38549468-38549675 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 198, 23

Conread position: 570-763
Cow position: chrX:41010924-41011105 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 574-772
Cow position: chrX:1960397-1960201 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 576-764
Cow position: chrX:23335951-23335759 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 13, 0

Conread position: 576-767
Cow position: chrX:4296795-4296605 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 578-762
Cow position: chrX:43115182-43115363 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 27

Conread position: 578-763
Cow position: chrX:13144478-13144662 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 578-764
Cow position: chrX:20957269-20957455 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 27, 21

Conread position: 578-767
Cow position: chrX:31436505-31436688 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 578-772
Cow position: chrX:22813094-22813289 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 135, 11

Conread position: 578-772
Cow position: chrX:27145635-27145823 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 126, 0

Conread position: 578-776
Cow position: chrX:11656112-11656306 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 124, 0

Conread position: 578-776
Cow position: chrX:42381081-42380884 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 121, 167

Conread position: 578-777
Cow position: chrX:19000155-19000356 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 578-783
Cow position: chrX:22115286-22115079 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 578-783
Cow position: chrX:23359080-23358882 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 578-784
Cow position: chrX:20583697-20583896 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 579-776
Cow position: chrX:12095740-12095543 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 579-784
Cow position: chrX:30958758-30958964 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 171

Conread position: 582-776
Cow position: chrX:32215265-32215457 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 583-776
Cow position: chrX:9252127-9251935 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 78, 120

Conread position: 583-776
Cow position: chrX:11517944-11517750 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 59, 53

Conread position: 583-778
Cow position: chrX:41858845-41858654 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 5

Conread position: 584-764
Cow position: chrX:37867291-37867470 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 584-776
Cow position: chrX:18485841-18486031 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 584-783
Cow position: chrX:31983548-31983343 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 585-762
Cow position: chrX:43150469-43150645 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 91, 0

Conread position: 585-764
Cow position: chrX:28836932-28837100 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 585-772
Cow position: chrX:37867471-37867657 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 585-775
Cow position: chrX:13923902-13924088 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 113, 0

Conread position: 585-776
Cow position: chrX:4269027-4268842 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 97

Conread position: 585-776
Cow position: chrX:5097761-5097566 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 15

Conread position: 585-776
Cow position: chrX:25207817-25207633 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 585-776
Cow position: chrX:27446724-27446911 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 132, 0

Conread position: 585-776
Cow position: chrX:32877337-32877151 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 50

Conread position: 585-783
Cow position: chrX:6559410-6559221 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 586-776
Cow position: chrX:41991093-41990895 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 105, 16

Conread position: 587-737
Cow position: chrX:31252448-31252597 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 587-776
Cow position: chrX:10865834-10865642 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 13

Conread position: 588-709
Cow position: chrX:37129310-37129431 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 588-710
Cow position: chrX:5872358-5872480 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 588-729
Cow position: chrX:16575153-16575294 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 588-742
Cow position: chrX:39180192-39180039 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 588-744
Cow position: chrX:26205407-26205258 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 588-751
Cow position: chrX:32574358-32574519 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 126, 0

Conread position: 588-753
Cow position: chrX:20345491-20345656 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 588-755
Cow position: chrX:19795463-19795302 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 65

Conread position: 588-755
Cow position: chrX:22822087-22822262 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 588-755
Cow position: chrX:31294531-31294362 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 103, 0

Conread position: 588-759
Cow position: chrX:12309345-12309174 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 588-759
Cow position: chrX:40035401-40035228 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 588-762
Cow position: chrX:33020478-33020652 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 588-762
Cow position: chrX:34543825-34544000 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 147, 0

Conread position: 588-763
Cow position: chrX:27705627-27705802 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 48

Conread position: 588-763
Cow position: chrX:37749942-37749777 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 588-764
Cow position: chrX:1175941-1175774 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 588-764
Cow position: chrX:3806723-3806894 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 588-764
Cow position: chrX:6407585-6407760 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 588-764
Cow position: chrX:17498363-17498539 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 54, 48

Conread position: 588-764
Cow position: chrX:21327952-21328130 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 50

Conread position: 588-764
Cow position: chrX:25035341-25035165 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 588-764
Cow position: chrX:25930678-25930856 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 89

Conread position: 588-764
Cow position: chrX:27459906-27460084 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 159, 0

Conread position: 588-764
Cow position: chrX:29478765-29478938 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 588-764
Cow position: chrX:34420775-34420952 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 117, 0

Conread position: 588-764
Cow position: chrX:34554764-34554940 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 588-764
Cow position: chrX:35285214-35285390 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 48

Conread position: 588-764
Cow position: chrX:48186499-48186320 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 588-765
Cow position: chrX:10831449-10831264 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 62

Conread position: 588-765
Cow position: chrX:31986533-31986355 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 97

Conread position: 588-765
Cow position: chrX:41810127-41809958 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 105, 0

Conread position: 588-765
Cow position: chrX:48822301-48822125 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 588-767
Cow position: chrX:4645872-4645695 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 95, 0

Conread position: 588-767
Cow position: chrX:20887600-20887430 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 118

Conread position: 588-767
Cow position: chrX:26493047-26493226 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 588-767
Cow position: chrX:29601787-29601610 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 105, 0

Conread position: 588-767
Cow position: chrX:30133277-30133105 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 588-767
Cow position: chrX:35276026-35276205 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 588-767
Cow position: chrX:35681608-35681786 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 101, 0

Conread position: 588-767
Cow position: chrX:44339283-44339102 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 124, 6

Conread position: 588-768
Cow position: chrX:27228167-27228349 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 588-772
Cow position: chrX:8917435-8917619 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 588-772
Cow position: chrX:10516294-10516478 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 588-772
Cow position: chrX:12290760-12290942 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 116, 0

Conread position: 588-772
Cow position: chrX:24170688-24170501 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 124, 47

Conread position: 588-772
Cow position: chrX:25815860-25815675 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 124, 78

Conread position: 588-772
Cow position: chrX:27075010-27074827 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 114, 95

Conread position: 588-772
Cow position: chrX:33654803-33654619 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 588-772
Cow position: chrX:34441413-34441229 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 588-772
Cow position: chrX:38967930-38968119 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 101, 37

Conread position: 588-772
Cow position: chrX:46909856-46910032 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 80, 87

Conread position: 588-773
Cow position: chrX:38301850-38302039 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 58, 48

Conread position: 588-774
Cow position: chrX:46532454-46532264 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 588-775
Cow position: chrX:35431198-35431014 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 588-776
Cow position: chrX:4091965-4092150 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 157, 0

Conread position: 588-776
Cow position: chrX:4403358-4403546 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 588-776
Cow position: chrX:8642087-8642273 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 46, 0

Conread position: 588-776
Cow position: chrX:15545222-15545035 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 588-776
Cow position: chrX:17524343-17524155 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 588-776
Cow position: chrX:19018790-19018600 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 588-776
Cow position: chrX:19203305-19203117 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 588-776
Cow position: chrX:24331817-24332005 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 588-776
Cow position: chrX:24365780-24365594 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 588-776
Cow position: chrX:30672355-30672156 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 588-776
Cow position: chrX:34398743-34398555 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 588-776
Cow position: chrX:35409793-35409980 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 588-776
Cow position: chrX:36866214-36866401 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 66, 0

Conread position: 588-776
Cow position: chrX:38094475-38094298 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 588-776
Cow position: chrX:38964149-38964325 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 588-776
Cow position: chrX:40648937-40649130 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 116, 18

Conread position: 588-776
Cow position: chrX:40680655-40680843 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 588-776
Cow position: chrX:41454913-41454725 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 588-776
Cow position: chrX:44054843-44055031 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 588-776
Cow position: chrX:46032686-46032500 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 27

Conread position: 588-781
Cow position: chrX:11633723-11633915 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 588-781
Cow position: chrX:27270416-27270602 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 56, 117

Conread position: 588-782
Cow position: chrX:38321341-38321149 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 588-783
Cow position: chrX:27416134-27416330 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 106, 37

Conread position: 588-783
Cow position: chrX:31489561-31489754 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 185, 0

Conread position: 588-783
Cow position: chrX:40336952-40337146 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 54, 22

Conread position: 588-783
Cow position: chrX:41027200-41027395 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 588-783
Cow position: chrX:48558787-48558980 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 142, 0

Conread position: 588-784
Cow position: chrX:16762812-16763003 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 98

Conread position: 588-784
Cow position: chrX:27261232-27261425 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 113

Conread position: 588-784
Cow position: chrX:41941664-41941859 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 132, 0

Conread position: 588-790
Cow position: chrX:4109225-4109428 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 190, 0

Conread position: 588-793
Cow position: chrX:36392143-36391945 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 588-806
Cow position: chrX:876801-876592 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 588-816
Cow position: chrX:26843228-26842999 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 54, 48

Conread position: 589-746
Cow position: chrX:19717563-19717712 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 589-757
Cow position: chrX:13147023-13147189 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 589-759
Cow position: chrX:36975993-36976163 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 589-764
Cow position: chrX:3494780-3494605 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 589-764
Cow position: chrX:18111420-18111595 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 589-764
Cow position: chrX:25049240-25049065 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 589-764
Cow position: chrX:39427257-39427082 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 589-764
Cow position: chrX:40320448-40320623 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 589-765
Cow position: chrX:8731136-8731311 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 589-767
Cow position: chrX:1055339-1055162 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 164, 99

Conread position: 589-767
Cow position: chrX:15545924-15546100 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 589-767
Cow position: chrX:37752064-37751892 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 589-767
Cow position: chrX:46533263-46533085 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 589-768
Cow position: chrX:3507609-3507784 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 589-768
Cow position: chrX:27514900-27515079 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 589-772
Cow position: chrX:11825602-11825419 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 589-772
Cow position: chrX:17231777-17231961 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 589-772
Cow position: chrX:17292997-17293180 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 589-772
Cow position: chrX:18439038-18439221 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 589-772
Cow position: chrX:19761796-19761973 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 589-772
Cow position: chrX:24336035-24335852 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 589-772
Cow position: chrX:28067892-28068075 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 589-772
Cow position: chrX:40574900-40574719 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 589-772
Cow position: chrX:46068717-46068540 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 589-775
Cow position: chrX:32910146-32910324 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 589-776
Cow position: chrX:17949451-17949264 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 589-776
Cow position: chrX:38218756-38218941 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 11

Conread position: 589-776
Cow position: chrX:42449972-42449785 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 589-778
Cow position: chrX:42855500-42855693 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 589-783
Cow position: chrX:27508980-27508791 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 100, 36

Conread position: 589-784
Cow position: chrX:4328141-4327946 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 54

Conread position: 589-792
Cow position: chrX:36393298-36393097 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 590-762
Cow position: chrX:42836224-42836395 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 101, 0

Conread position: 590-763
Cow position: chrX:42247139-42246966 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 590-764
Cow position: chrX:20339849-20339679 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 590-764
Cow position: chrX:29451508-29451329 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 590-767
Cow position: chrX:36367892-36367715 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 590-767
Cow position: chrX:42050227-42050050 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 590-772
Cow position: chrX:2314576-2314394 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 590-772
Cow position: chrX:8759668-8759847 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 44

Conread position: 590-772
Cow position: chrX:34270604-34270785 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 15, 7

Conread position: 590-772
Cow position: chrX:35885684-35885508 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 590-776
Cow position: chrX:4632815-4632626 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 17, 0

Conread position: 590-776
Cow position: chrX:13121981-13122172 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 590-776
Cow position: chrX:14135720-14135903 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 105

Conread position: 590-776
Cow position: chrX:18204422-18204238 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 141

Conread position: 590-776
Cow position: chrX:36283383-36283568 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 590-776
Cow position: chrX:42893969-42894150 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 94, 123

Conread position: 590-782
Cow position: chrX:16763882-16763697 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 114, 0

Conread position: 590-782
Cow position: chrX:27668915-27668728 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 590-783
Cow position: chrX:31250431-31250625 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 151, 0

Conread position: 590-784
Cow position: chrX:16541614-16541419 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 184, 0

Conread position: 590-784
Cow position: chrX:20168601-20168790 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 590-784
Cow position: chrX:34411889-34412084 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 125, 0

Conread position: 590-787
Cow position: chrX:296433-296631 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 590-815
Cow position: chrX:1121324-1121099 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 591-753
Cow position: chrX:21064327-21064487 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 591-762
Cow position: chrX:36468324-36468154 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 591-764
Cow position: chrX:18030373-18030200 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 591-766
Cow position: chrX:25049058-25048884 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 32

Conread position: 591-775
Cow position: chrX:41435505-41435315 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 591-776
Cow position: chrX:597430-597250 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 591-776
Cow position: chrX:42875256-42875437 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 591-783
Cow position: chrX:6634388-6634580 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 591-841
Cow position: chrX:25846029-25845779 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 212, 90

Conread position: 592-764
Cow position: chrX:38935324-38935495 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 592-764
Cow position: chrX:46587867-46588036 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 592-767
Cow position: chrX:43008654-43008829 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 592-776
Cow position: chrX:41790384-41790199 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 97, 0

Conread position: 593-764
Cow position: chrX:44225687-44225514 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 593-772
Cow position: chrX:11653816-11653991 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 593-776
Cow position: chrX:33466671-33466850 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 124, 20

Conread position: 593-784
Cow position: chrX:10415207-10415017 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 181, 0

Conread position: 594-763
Cow position: chrX:44123302-44123464 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 594-783
Cow position: chrX:39290406-39290590 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 148, 80

Conread position: 595-749
Cow position: chrX:5063292-5063439 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 8, 46

Conread position: 597-750
Cow position: chrX:44660540-44660386 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 39

Conread position: 597-776
Cow position: chrX:47100547-47100366 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 105, 86

Conread position: 598-741
Cow position: chrX:34754125-34753981 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 598-746
Cow position: chrX:21672611-21672760 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 598-776
Cow position: chrX:44040227-44040405 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 600-776
Cow position: chrX:51848-51674 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 601-781
Cow position: chrX:4602884-4602705 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 603-763
Cow position: chrX:14925328-14925488 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 603-764
Cow position: chrX:1122491-1122331 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 150, 0

Conread position: 603-772
Cow position: chrX:27175054-27175224 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 131, 0

Conread position: 603-772
Cow position: chrX:41878878-41878713 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 129, 122

Conread position: 603-775
Cow position: chrX:23497635-23497470 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 604-767
Cow position: chrX:15100040-15100197 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 95

Conread position: 604-772
Cow position: chrX:26979732-26979567 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 33

Conread position: 604-772
Cow position: chrX:46546818-46546649 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 143, 0

Conread position: 604-776
Cow position: chrX:44192390-44192214 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 604-782
Cow position: chrX:5915245-5915425 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 604-783
Cow position: chrX:1101614-1101785 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 605-776
Cow position: chrX:32330224-32330399 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 605-776
Cow position: chrX:42760310-42760481 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 609-785
Cow position: chrX:1938076-1938249 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 610-764
Cow position: chrX:10237850-10237697 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 610-764
Cow position: chrX:22552916-22552763 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 136, 0

Conread position: 610-764
Cow position: chrX:44995561-44995716 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 610-772
Cow position: chrX:26882017-26881855 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 610-772
Cow position: chrX:28106910-28107070 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 610-776
Cow position: chrX:11589304-11589139 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 610-776
Cow position: chrX:16801200-16801039 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 610-777
Cow position: chrX:10278933-10279104 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 75, 143

Conread position: 611-776
Cow position: chrX:4559797-4559962 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 611-784
Cow position: chrX:9451409-9451577 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 613-783
Cow position: chrX:22283903-22284074 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 613-784
Cow position: chrX:35392232-35392068 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 161, 82

Conread position: 615-788
Cow position: chrX:28167047-28167219 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 616-776
Cow position: chrX:11674178-11674340 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 5, 21

Conread position: 616-776
Cow position: chrX:45044521-45044682 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 617-764
Cow position: chrX:11813143-11813290 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 617-776
Cow position: chrX:30789461-30789301 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 617-785
Cow position: chrX:33678403-33678233 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 617-790
Cow position: chrX:38577715-38577885 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 618-776
Cow position: chrX:6480525-6480367 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 618-776
Cow position: chrX:41215393-41215551 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 619-763
Cow position: chrX:16770136-16770280 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 619-776
Cow position: chrX:34194009-34193852 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 621-776
Cow position: chrX:26720608-26720462 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 14

Conread position: 621-776
Cow position: chrX:42506875-42506718 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 21, 14

Conread position: 622-784
Cow position: chrX:45448983-45449149 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 623-764
Cow position: chrX:34108282-34108142 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 623-765
Cow position: chrX:44702990-44702848 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 623-772
Cow position: chrX:11670762-11670911 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 625-784
Cow position: chrX:37717800-37717958 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 631-772
Cow position: chrX:1996368-1996227 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 636-767
Cow position: chrX:42314803-42314672 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 636-772
Cow position: chrX:19356552-19356688 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 636-783
Cow position: chrX:39887125-39886977 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 641-772
Cow position: chrX:10479843-10479974 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 643-763
Cow position: chrX:13135454-13135338 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 645-783
Cow position: chrX:42159039-42159175 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 128, 0

Conread position: 647-764
Cow position: chrX:783544-783661 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 647-781
Cow position: chrX:41194005-41194138 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 28

Conread position: 651-767
Cow position: chrX:29723855-29723970 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 653-776
Cow position: chrX:6855965-6856088 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 654-775
Cow position: chrX:42220595-42220474 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 662-782
Cow position: chrX:19162016-19161896 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 663-776
Cow position: chrX:23185222-23185109 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.