Cow genome map

Conread name: Ss1.1-LyN1-MLN01B010082.5

Conread position: 1-218
Cow position: chr23:22804415-22804214 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 1-221
Cow position: chr23:28545629-28545852 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 13

Conread position: 1-225
Cow position: chr23:4293339-4293123 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 1-225
Cow position: chr23:13408991-13408778 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 1-225
Cow position: chr23:21630906-21630688 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 81, 12

Conread position: 1-225
Cow position: chr23:26829146-26828933 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 1-225
Cow position: chr23:36462621-36462845 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 12

Conread position: 2-128
Cow position: chr23:4579346-4579473 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 2-180
Cow position: chr23:15056936-15057104 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 2-191
Cow position: chr23:11473816-11473994 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 180, 9

Conread position: 2-193
Cow position: chr23:11044872-11044693 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 2-208
Cow position: chr23:3167934-3167738 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 80

Conread position: 2-213
Cow position: chr23:40688919-40688719 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 2-214
Cow position: chr23:1696520-1696318 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 32

Conread position: 2-217
Cow position: chr23:3282694-3282899 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 2-223
Cow position: chr23:35937714-35937498 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 165, 122

Conread position: 2-225
Cow position: chr23:1721311-1721524 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 117, 0

Conread position: 2-225
Cow position: chr23:5458642-5458429 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 2-225
Cow position: chr23:7311563-7311351 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 121, 0

Conread position: 2-225
Cow position: chr23:9392985-9393203 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 79, 129

Conread position: 2-225
Cow position: chr23:10936393-10936607 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 123, 0

Conread position: 2-225
Cow position: chr23:15764230-15764025 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 2-225
Cow position: chr23:18204176-18203963 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 118, 0

Conread position: 2-225
Cow position: chr23:29346567-29346785 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 126

Conread position: 2-225
Cow position: chr23:31422942-31423153 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 3-222
Cow position: chr23:1745372-1745164 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 74

Conread position: 4-207
Cow position: chr23:20781467-20781264 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 9

Conread position: 4-212
Cow position: chr23:6245246-6245444 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 197, 14

Conread position: 5-199
Cow position: chr23:31493572-31493388 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 102, 0

Conread position: 5-223
Cow position: chr23:29626119-29625910 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 45, 110

Conread position: 5-225
Cow position: chr23:25192514-25192724 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 120, 0

Conread position: 6-203
Cow position: chr23:18655573-18655386 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 6-222
Cow position: chr23:19002381-19002593 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 123

Conread position: 6-223
Cow position: chr23:6593023-6593236 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 59, 123

Conread position: 6-223
Cow position: chr23:31602060-31602269 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 117, 0

Conread position: 6-224
Cow position: chr23:13599041-13598833 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 117, 0

Conread position: 6-225
Cow position: chr23:4608699-4608916 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 124

Conread position: 6-225
Cow position: chr23:8291357-8291139 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 141, 0

Conread position: 6-225
Cow position: chr23:9599217-9599008 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 119, 0

Conread position: 6-225
Cow position: chr23:16610123-16610338 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 118

Conread position: 6-248
Cow position: chr23:8959286-8959054 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 214, 115

Conread position: 12-221
Cow position: chr23:39775393-39775192 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 106

Conread position: 13-123
Cow position: chr23:20744909-20745019 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 13-159
Cow position: chr23:16664887-16665024 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 13-173
Cow position: chr23:8911159-8911009 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 110, 0

Conread position: 13-175
Cow position: chr23:8698126-8697974 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 13-181
Cow position: chr23:4005591-4005435 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 13-182
Cow position: chr23:30662944-30663103 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 13-185
Cow position: chr23:9595149-9595310 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 13-206
Cow position: chr23:770607-770790 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 13-207
Cow position: chr23:15710397-15710583 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 89

Conread position: 13-207
Cow position: chr23:22031556-22031740 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 13-214
Cow position: chr23:1131785-1131592 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 13-217
Cow position: chr23:406478-406672 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 159, 5

Conread position: 13-219
Cow position: chr23:21789091-21789287 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 13-220
Cow position: chr23:36129218-36129417 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 14, 111

Conread position: 13-221
Cow position: chr23:4855956-4856153 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 13-221
Cow position: chr23:26795536-26795736 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 60, 108

Conread position: 13-222
Cow position: chr23:14191232-14191032 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 108

Conread position: 13-222
Cow position: chr23:15020806-15020606 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 13-223
Cow position: chr23:9711923-9712127 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 77

Conread position: 13-223
Cow position: chr23:11128913-11128703 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 136, 122

Conread position: 13-223
Cow position: chr23:18797023-18797223 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 13-223
Cow position: chr23:20586032-20586241 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 69

Conread position: 13-223
Cow position: chr23:20605618-20605825 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 105, 0

Conread position: 13-223
Cow position: chr23:25864999-25865207 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 115

Conread position: 13-223
Cow position: chr23:31606320-31606120 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 13-223
Cow position: chr23:32937323-32937522 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 13-223
Cow position: chr23:32939984-32940186 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 13-223
Cow position: chr23:34315288-34315488 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 13-224
Cow position: chr23:644997-644792 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 121

Conread position: 13-224
Cow position: chr23:1647299-1647096 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 159, 80

Conread position: 13-224
Cow position: chr23:9652835-9653040 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 115

Conread position: 13-224
Cow position: chr23:18802593-18802795 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 174, 110

Conread position: 13-224
Cow position: chr23:32052272-32052071 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 13-224
Cow position: chr23:35284627-35284829 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 113

Conread position: 13-224
Cow position: chr23:41285616-41285418 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 154, 25

Conread position: 13-225
Cow position: chr23:573375-573577 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 13-225
Cow position: chr23:610593-610391 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:672062-671860 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:953909-954110 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 115, 0

Conread position: 13-225
Cow position: chr23:1113844-1113642 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:1398354-1398552 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 13-225
Cow position: chr23:1428481-1428284 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 13-225
Cow position: chr23:1536002-1535807 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 13-225
Cow position: chr23:2311866-2312071 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 13-225
Cow position: chr23:2723638-2723436 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:3140519-3140310 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 122

Conread position: 13-225
Cow position: chr23:3302746-3302545 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 13-225
Cow position: chr23:3549303-3549505 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:3717054-3716852 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:3786324-3786122 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 111, 0

Conread position: 13-225
Cow position: chr23:3827198-3827400 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:4100770-4100568 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 100, 0

Conread position: 13-225
Cow position: chr23:4267328-4267126 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 115, 0

Conread position: 13-225
Cow position: chr23:4741066-4741268 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 13-225
Cow position: chr23:5441809-5441607 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 13-225
Cow position: chr23:6173129-6173330 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 110, 0

Conread position: 13-225
Cow position: chr23:7360346-7360143 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 76, 69

Conread position: 13-225
Cow position: chr23:7596648-7596849 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 42, 111

Conread position: 13-225
Cow position: chr23:7844969-7844767 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 171
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 93, 0

Conread position: 13-225
Cow position: chr23:9266971-9267173 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:9268270-9268067 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 104

Conread position: 13-225
Cow position: chr23:9517782-9517984 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:9712793-9712591 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 13-225
Cow position: chr23:10014228-10014025 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 25, 110

Conread position: 13-225
Cow position: chr23:10840762-10840560 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:10844006-10843808 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 13-225
Cow position: chr23:10852735-10852533 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 110, 0

Conread position: 13-225
Cow position: chr23:10873769-10873972 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 113

Conread position: 13-225
Cow position: chr23:11070956-11070754 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:11080277-11080075 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:12864580-12864378 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:13511416-13511215 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 166
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 103, 0

Conread position: 13-225
Cow position: chr23:13520138-13519936 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 110, 0

Conread position: 13-225
Cow position: chr23:14215344-14215544 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 13-225
Cow position: chr23:14385816-14386018 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:14566043-14566254 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 126

Conread position: 13-225
Cow position: chr23:14576104-14575902 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 115, 0

Conread position: 13-225
Cow position: chr23:14910545-14910741 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:16072910-16072706 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 82, 111

Conread position: 13-225
Cow position: chr23:19316319-19316521 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:20001756-20001557 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 13-225
Cow position: chr23:20025832-20025626 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 13-225
Cow position: chr23:20170374-20170580 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 114

Conread position: 13-225
Cow position: chr23:20980525-20980324 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 62, 71

Conread position: 13-225
Cow position: chr23:21351063-21351265 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:24120447-24120245 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:25352253-25352050 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:25380974-25380772 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:25664930-25665133 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 69, 111

Conread position: 13-225
Cow position: chr23:26306055-26305855 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 94, 0

Conread position: 13-225
Cow position: chr23:26932410-26932612 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:26941662-26941459 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 112

Conread position: 13-225
Cow position: chr23:27314635-27314433 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 111, 0

Conread position: 13-225
Cow position: chr23:28085046-28084845 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 13-225
Cow position: chr23:29043676-29043474 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:29447362-29447570 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:30244372-30244169 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 111

Conread position: 13-225
Cow position: chr23:30656477-30656684 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 69, 115

Conread position: 13-225
Cow position: chr23:31194507-31194709 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 13-225
Cow position: chr23:31277392-31277182 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 39

Conread position: 13-225
Cow position: chr23:38934341-38934543 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:39049732-39049929 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 13-225
Cow position: chr23:39745752-39745550 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:39747928-39747726 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 13-225
Cow position: chr23:39784649-39784447 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 61

Conread position: 13-225
Cow position: chr23:40710813-40710611 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 13-226
Cow position: chr23:2470277-2470074 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 110, 0

Conread position: 13-226
Cow position: chr23:10554331-10554534 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 110, 0

Conread position: 13-240
Cow position: chr23:1670601-1670382 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 62, 114

Conread position: 14-118
Cow position: chr23:25669387-25669491 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-223
Cow position: chr23:20057435-20057631 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 89, 0

Conread position: 14-225
Cow position: chr23:1430121-1430322 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 109, 0

Conread position: 14-225
Cow position: chr23:1640490-1640289 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 109, 0

Conread position: 14-225
Cow position: chr23:3968927-3969126 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 67, 0

Conread position: 14-225
Cow position: chr23:21394916-21395122 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 114

Conread position: 15-200
Cow position: chr23:533911-533708 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 38, 0

Conread position: 15-217
Cow position: chr23:27037503-27037311 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 110, 0

Conread position: 15-225
Cow position: chr23:11813963-11814172 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 67, 116

Conread position: 15-225
Cow position: chr23:33940455-33940656 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 82

Conread position: 16-187
Cow position: chr23:22936182-22936024 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 50, 0

Conread position: 16-225
Cow position: chr23:2721607-2721407 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 107, 0

Conread position: 16-225
Cow position: chr23:7324431-7324230 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 16-225
Cow position: chr23:39389941-39389736 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 107, 0

Conread position: 16-225
Cow position: chr23:40553252-40553451 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 17-225
Cow position: chr23:19056477-19056671 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 18-222
Cow position: chr23:27735100-27734906 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 107, 0

Conread position: 18-224
Cow position: chr23:344500-344695 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 165
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 97, 0

Conread position: 18-224
Cow position: chr23:21772021-21772217 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 18-225
Cow position: chr23:2320061-2320260 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 18-225
Cow position: chr23:4517421-4517216 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 88, 117

Conread position: 18-225
Cow position: chr23:9223034-9222836 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 198, 95

Conread position: 18-225
Cow position: chr23:9874360-9874165 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 18-225
Cow position: chr23:16246419-16246222 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 105, 0

Conread position: 18-225
Cow position: chr23:23885321-23885121 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 108

Conread position: 18-225
Cow position: chr23:26231001-26230804 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 105, 0

Conread position: 18-225
Cow position: chr23:26824667-26824471 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 110, 0

Conread position: 18-225
Cow position: chr23:33233444-33233641 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 188, 21

Conread position: 18-225
Cow position: chr23:40774215-40774018 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 105, 0

Conread position: 19-222
Cow position: chr23:11209670-11209477 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 164
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 105, 0

Conread position: 19-225
Cow position: chr23:416844-416642 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 62, 111

Conread position: 19-225
Cow position: chr23:6720603-6720793 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 19-225
Cow position: chr23:7494500-7494304 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 19-225
Cow position: chr23:20734181-20733985 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 19-225
Cow position: chr23:26741776-26741973 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 105, 0

Conread position: 20-213
Cow position: chr23:35941900-35941719 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 20-224
Cow position: chr23:7468831-7468636 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 65, 47

Conread position: 21-225
Cow position: chr23:4487082-4487278 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 194, 104

Conread position: 22-224
Cow position: chr23:1254342-1254161 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 22-225
Cow position: chr23:36309088-36308895 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 28-225
Cow position: chr23:29033908-29033719 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 160
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 65, 98

Conread position: 30-225
Cow position: chr23:33599718-33599902 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 40-225
Cow position: chr23:7374535-7374359 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 41-225
Cow position: chr23:1941801-1941627 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 148
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 82, 0

Conread position: 46-225
Cow position: chr23:2802648-2802814 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 46-225
Cow position: chr23:11404822-11404996 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 50

Conread position: 48-212
Cow position: chr23:36715766-36715917 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 50-225
Cow position: chr23:16769411-16769576 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 53-224
Cow position: chr23:18650288-18650129 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 57-225
Cow position: chr23:2035081-2035239 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 76-225
Cow position: chr23:40502872-40503012 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 25

Show alignments to all cow chromosomes.