Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01B030008.5 |
| Conread position: | 1-151 |
| Cow position: | chr23:21263008-21263154 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-154 |
| Cow position: | chr23:21236056-21236209 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-151 |
| Cow position: | chr23:22948008-22948151 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 3-152 |
| Cow position: | chr23:21278710-21278856 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 10-151 |
| Cow position: | chr23:5385292-5385432 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 149-430 |
| Cow position: | chr23:5449025-5448744 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-434 |
| Cow position: | chr23:21283947-21284235 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 168 |
| Conread position: | 149-444 |
| Cow position: | chr23:5390957-5391253 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 11, 233 |
| Conread position: | 152-430 |
| Cow position: | chr23:22932422-22932700 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 158-429 |
| Cow position: | chr23:5464290-5464019 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 198, 190 |
| Conread position: | 181-430 |
| Cow position: | chr23:21242372-21242621 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 423-707 |
| Cow position: | chr23:5398918-5399202 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 427-705 |
| Cow position: | chr23:5446513-5446235 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 427-707 |
| Cow position: | chr23:21267650-21267923 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 427-707 |
| Cow position: | chr23:22907855-22908132 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 427-723 |
| Cow position: | chr23:21244789-21245086 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 0 |
| Conread position: | 427-723 |
| Cow position: | chr23:22934740-22935037 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 0 |
| Conread position: | 427-723 |
| Cow position: | chr23:22957047-22957344 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 0 |
| Conread position: | 431-707 |
| Cow position: | chr23:5463573-5463296 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 707-818 |
| Cow position: | chr23:21245812-21245923 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 707-818 |
| Cow position: | chr23:21268654-21268765 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 707-818 |
| Cow position: | chr23:22908834-22908945 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 707-818 |
| Cow position: | chr23:22958043-22958154 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 709-818 |
| Cow position: | chr23:22936840-22936949 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.