Cow genome map

Conread name: Ss1.1-LyN1-MLN01C040097.5

Conread position: 1-170
Cow position: chr1:39703191-39703026 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 49

Conread position: 1-190
Cow position: chr1:22730974-22730775 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 14

Conread position: 3-186
Cow position: chr1:85339614-85339430 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 112, 169

Conread position: 7-186
Cow position: chr1:25956128-25955941 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 109, 19

Conread position: 7-187
Cow position: chr1:75227088-75227275 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 7-190
Cow position: chr1:72105635-72105447 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 59

Conread position: 9-190
Cow position: chr1:91796011-91796187 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 19

Conread position: 10-166
Cow position: chr1:51626569-51626723 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 109, 26

Conread position: 10-166
Cow position: chr1:95017332-95017481 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 10-191
Cow position: chr1:80423502-80423692 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 10-218
Cow position: chr1:89388574-89388358 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 199

Conread position: 11-190
Cow position: chr1:25021851-25022034 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 91, 13

Conread position: 12-185
Cow position: chr1:68863247-68863078 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 23, 18

Conread position: 12-186
Cow position: chr1:20537433-20537251 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 142

Conread position: 12-190
Cow position: chr1:42887054-42887236 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 24

Conread position: 12-191
Cow position: chr1:42541817-42541638 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 102, 19

Conread position: 13-180
Cow position: chr1:24132836-24133011 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 13-186
Cow position: chr1:67919357-67919181 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 14-164
Cow position: chr1:45233209-45233059 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 112

Conread position: 14-180
Cow position: chr1:63994332-63994503 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 89, 22

Conread position: 14-186
Cow position: chr1:97144246-97144421 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 22

Conread position: 15-166
Cow position: chr1:64572739-64572581 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 15-191
Cow position: chr1:20000528-20000708 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 129

Conread position: 15-191
Cow position: chr1:79663227-79663398 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 89

Conread position: 16-180
Cow position: chr1:43855513-43855347 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 91, 0

Conread position: 16-186
Cow position: chr1:69539909-69539737 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 16-190
Cow position: chr1:36998407-36998226 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 64

Conread position: 16-191
Cow position: chr1:70416537-70416720 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 100, 24

Conread position: 17-170
Cow position: chr1:5849468-5849320 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 9

Conread position: 17-186
Cow position: chr1:40078016-40077840 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 23, 61

Conread position: 17-186
Cow position: chr1:82880854-82880690 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 17-187
Cow position: chr1:102768397-102768222 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 86, 25

Conread position: 17-190
Cow position: chr1:55685754-55685937 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 18-167
Cow position: chr1:8778117-8778270 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 13

Conread position: 18-179
Cow position: chr1:41137925-41138091 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 18-186
Cow position: chr1:72011600-72011767 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 18-190
Cow position: chr1:5636850-5637018 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 158, 82

Conread position: 18-190
Cow position: chr1:23968845-23969016 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 95, 13

Conread position: 18-190
Cow position: chr1:98556898-98557078 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 98, 18

Conread position: 18-191
Cow position: chr1:14980914-14981085 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 89

Conread position: 19-181
Cow position: chr1:10778773-10778614 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 12

Conread position: 19-190
Cow position: chr1:49824846-49825023 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 86, 17

Conread position: 19-208
Cow position: chr1:32014414-32014218 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 19-214
Cow position: chr1:70483115-70483318 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 21

Conread position: 20-170
Cow position: chr1:196786-196943 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 20-188
Cow position: chr1:37470710-37470544 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 95, 20

Conread position: 20-190
Cow position: chr1:101507570-101507401 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 95, 69

Conread position: 21-180
Cow position: chr1:59519128-59518967 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 82, 10

Conread position: 21-186
Cow position: chr1:84787480-84787316 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 58

Conread position: 21-208
Cow position: chr1:20667531-20667720 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 93, 44

Conread position: 25-191
Cow position: chr1:54478530-54478369 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 163, 15

Conread position: 26-180
Cow position: chr1:50930767-50930927 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 84, 10

Conread position: 26-190
Cow position: chr1:44507181-44507014 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 10

Conread position: 26-190
Cow position: chr1:54156522-54156693 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 77, 10

Conread position: 27-180
Cow position: chr1:100800556-100800716 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 27-187
Cow position: chr1:6166445-6166285 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 27-190
Cow position: chr1:39426803-39426964 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 5, 78

Conread position: 27-190
Cow position: chr1:55428739-55428915 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 28-144
Cow position: chr1:68857695-68857576 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 28-155
Cow position: chr1:45680481-45680352 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 28-180
Cow position: chr1:82936392-82936545 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 13, 33

Conread position: 28-205
Cow position: chr1:43505736-43505556 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 176

Conread position: 28-214
Cow position: chr1:81481173-81481366 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 29-186
Cow position: chr1:53474360-53474202 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 89

Conread position: 29-190
Cow position: chr1:49980919-49980751 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 157

Conread position: 29-240
Cow position: chr1:40284435-40284648 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 74

Conread position: 30-155
Cow position: chr1:80733206-80733079 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 30-190
Cow position: chr1:5872563-5872738 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 31-186
Cow position: chr1:70044553-70044399 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 72

Conread position: 31-186
Cow position: chr1:74955823-74955975 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 31-190
Cow position: chr1:62469267-62469102 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 31-215
Cow position: chr1:55753010-55753201 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 32-166
Cow position: chr1:64302042-64302177 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 71, 37

Conread position: 32-180
Cow position: chr1:33998957-33998808 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 89

Conread position: 32-180
Cow position: chr1:48618039-48618192 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 32-181
Cow position: chr1:78066335-78066486 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 32-186
Cow position: chr1:3923596-3923754 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 131
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 73, 0

Conread position: 32-186
Cow position: chr1:7740152-7739993 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 32-186
Cow position: chr1:21787532-21787382 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 32-186
Cow position: chr1:30028024-30028186 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 32-189
Cow position: chr1:37321802-37321959 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 69

Conread position: 32-190
Cow position: chr1:15334097-15333932 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 32-190
Cow position: chr1:56225990-56225826 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 32-190
Cow position: chr1:63461086-63460919 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 32-190
Cow position: chr1:90820272-90820436 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 70, 145

Conread position: 32-201
Cow position: chr1:91065949-91066121 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 80, 142

Conread position: 32-208
Cow position: chr1:102754058-102753881 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 155, 16

Conread position: 32-215
Cow position: chr1:56749023-56748830 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 180

Conread position: 33-166
Cow position: chr1:34160035-34159902 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 33-191
Cow position: chr1:242759-242597 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 33-191
Cow position: chr1:56477792-56477632 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 35-169
Cow position: chr1:93528899-93528764 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 35-180
Cow position: chr1:51860359-51860509 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 36-180
Cow position: chr1:98583952-98583805 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 36-187
Cow position: chr1:100552170-100552020 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 36-190
Cow position: chr1:6731383-6731221 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 36-190
Cow position: chr1:22526078-22525919 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 36-190
Cow position: chr1:47886278-47886439 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 9

Conread position: 36-191
Cow position: chr1:10470626-10470466 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 36-208
Cow position: chr1:84811737-84811915 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 171

Conread position: 37-191
Cow position: chr1:39224736-39224886 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 148, 66

Conread position: 38-167
Cow position: chr1:71045937-71045810 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 38-180
Cow position: chr1:41027274-41027126 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 38-186
Cow position: chr1:82337578-82337734 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 38-190
Cow position: chr1:63079203-63079051 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 29

Conread position: 38-190
Cow position: chr1:99609569-99609410 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 38-216
Cow position: chr1:92363468-92363648 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 104

Conread position: 39-180
Cow position: chr1:46143266-46143410 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 39-186
Cow position: chr1:95618842-95618688 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 39-190
Cow position: chr1:41022617-41022460 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 40-164
Cow position: chr1:84111-83990 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 40-183
Cow position: chr1:96472615-96472479 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 40-186
Cow position: chr1:100575841-100575992 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 40-190
Cow position: chr1:15547665-15547512 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 40-191
Cow position: chr1:11770042-11770196 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 41-208
Cow position: chr1:96362239-96362403 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 145, 25

Conread position: 43-186
Cow position: chr1:3607992-3607850 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 45-190
Cow position: chr1:61011370-61011222 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 46-170
Cow position: chr1:37503688-37503809 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 46-213
Cow position: chr1:52369987-52370154 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 151, 65

Conread position: 48-186
Cow position: chr1:45223768-45223627 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 48-190
Cow position: chr1:6941658-6941509 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 48-190
Cow position: chr1:11729364-11729216 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 50

Conread position: 48-190
Cow position: chr1:77720068-77720207 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 139, 53

Conread position: 48-213
Cow position: chr1:6959071-6958900 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 61, 159

Conread position: 49-190
Cow position: chr1:81638730-81638589 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 15

Conread position: 50-180
Cow position: chr1:63905074-63905207 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 52-187
Cow position: chr1:68871769-68871641 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 54-190
Cow position: chr1:45019620-45019760 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 55-186
Cow position: chr1:99642184-99642323 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 0

Show alignments to all cow chromosomes.